RNA–Protein interactions for RNA: ENST00000467911.1

NCK1-203, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-203ENST00000467911 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
NCK1-203ENST00000467911 KRTAP2-4Q9BYR9 128 aa0.57□□□□□ -2.32
NCK1-203ENST00000467911 KRTAP2-1Q9BYU5 128 aa0.57□□□□□ -2.32
NCK1-203ENST00000467911 SPTBN1Q01082 2364 aaKnown RBP0.57□□□□□ -2.32
NCK1-203ENST00000467911 F8P00451 2351 aa0.56□□□□□ -2.32
NCK1-203ENST00000467911 H3BNG1 76 aa0.56□□□□□ -2.32
NCK1-203ENST00000467911 RHPN1-AS1Q9BWJ2 59 aa0.56□□□□□ -2.32
NCK1-203ENST00000467911 DNAH3Q8TD57 4116 aa0.56□□□□□ -2.32
NCK1-203ENST00000467911 ABCA2Q9BZC7 2435 aa0.56□□□□□ -2.32
NCK1-203ENST00000467911 VWFP04275 2813 aa0.56□□□□□ -2.32
NCK1-203ENST00000467911 USP24Q9UPU5 2620 aa0.55□□□□□ -2.32
NCK1-203ENST00000467911 UBR5O95071 2799 aaPredicted RBP0.55□□□□□ -2.32
NCK1-203ENST00000467911 TENM4Q6N022 2769 aa0.55□□□□□ -2.32
NCK1-203ENST00000467911 DYNC2H1Q8NCM8 4307 aaKnown RBP0.55□□□□□ -2.32
NCK1-203ENST00000467911 H3BUX3 64 aa0.55□□□□□ -2.32
NCK1-203ENST00000467911 TNP1P09430 55 aa0.55□□□□□ -2.32
NCK1-203ENST00000467911 SMR3AQ99954 134 aa0.55□□□□□ -2.32
NCK1-203ENST00000467911 CUBNO60494 3623 aa0.55□□□□□ -2.32
NCK1-203ENST00000467911 CRYBG3Q68DQ2 2970 aa0.55□□□□□ -2.32
NCK1-203ENST00000467911 DMDP11532 3685 aa0.55□□□□□ -2.32
NCK1-203ENST00000467911 TNRC18O15417 2968 aaPredicted RBP0.54□□□□□ -2.32
NCK1-203ENST00000467911 RELNP78509 3460 aa0.54□□□□□ -2.32
NCK1-203ENST00000467911 DEFB108BQ8NET1 73 aa0.54□□□□□ -2.32
NCK1-203ENST00000467911 ABCA12Q86UK0 2595 aa0.54□□□□□ -2.32
NCK1-203ENST00000467911 MGAQ8IWI9 3026 aa0.54□□□□□ -2.32
NCK1-203ENST00000467911 DNAH7Q8WXX0 4024 aa0.54□□□□□ -2.32
NCK1-203ENST00000467911 PDZD2O15018 2839 aa0.53□□□□□ -2.32
NCK1-203ENST00000467911 DNAH6Q9C0G6 4158 aa0.53□□□□□ -2.32
NCK1-203ENST00000467911 HUWE1Q7Z6Z7 4374 aaKnown RBP0.53□□□□□ -2.32
NCK1-203ENST00000467911 C9orf92A6NGG3 77 aa0.53□□□□□ -2.32
NCK1-203ENST00000467911 DEFB110Q30KQ9 67 aa0.53□□□□□ -2.32
NCK1-203ENST00000467911 DNAH10Q8IVF4 4471 aa0.53□□□□□ -2.32
NCK1-203ENST00000467911 POLQO75417 2590 aa0.53□□□□□ -2.32
NCK1-203ENST00000467911 HECTD1Q9ULT8 2610 aa0.53□□□□□ -2.32
NCK1-203ENST00000467911 CHD6Q8TD26 2715 aa0.53□□□□□ -2.32
NCK1-203ENST00000467911 TENM2Q9NT68 2774 aa0.53□□□□□ -2.32
NCK1-203ENST00000467911 ANK3Q12955 4377 aaKnown RBP0.53□□□□□ -2.32
NCK1-203ENST00000467911 GVINP1Q7Z2Y8 2422 aa0.53□□□□□ -2.33
NCK1-203ENST00000467911 APOBP04114 4563 aaKnown RBP0.52□□□□□ -2.33
NCK1-203ENST00000467911 DNAH2Q9P225 4427 aa0.52□□□□□ -2.33
NCK1-203ENST00000467911 DNAH9Q9NYC9 4486 aa0.52□□□□□ -2.33
NCK1-203ENST00000467911 CSPG4Q6UVK1 2322 aa0.52□□□□□ -2.33
NCK1-203ENST00000467911 U3KQA8 63 aa0.52□□□□□ -2.33
NCK1-203ENST00000467911 HSPG2P98160 4391 aa0.52□□□□□ -2.33
NCK1-203ENST00000467911 LAMA5O15230 3695 aa0.52□□□□□ -2.33
NCK1-203ENST00000467911 EP300Q09472 2414 aaPredicted RBP0.52□□□□□ -2.33
NCK1-203ENST00000467911 A0A096LPF7 62 aa0.51□□□□□ -2.33
NCK1-203ENST00000467911 BDP1A6H8Y1 2624 aa0.51□□□□□ -2.33
NCK1-203ENST00000467911 ATRQ13535 2644 aa0.51□□□□□ -2.33
NCK1-203ENST00000467911 FRYQ5TBA9 3013 aa0.51□□□□□ -2.33
NCK1-203ENST00000467911 PKD1L2Q7Z442 2459 aa0.51□□□□□ -2.33
NCK1-203ENST00000467911 NCOR1O75376 2440 aa0.5□□□□□ -2.33
NCK1-203ENST00000467911 SZT2Q5T011 3432 aa0.5□□□□□ -2.33
NCK1-203ENST00000467911 RANBP2P49792 3224 aaKnown RBP0.5□□□□□ -2.33
NCK1-203ENST00000467911 CFAP54Q96N23 3096 aa0.5□□□□□ -2.33
NCK1-203ENST00000467911 DCHS2Q6V1P9 2916 aa0.5□□□□□ -2.33
NCK1-203ENST00000467911 COL6A5A8TX70 2615 aa0.5□□□□□ -2.33
NCK1-203ENST00000467911 AKAP6Q13023 2319 aa0.49□□□□□ -2.33
NCK1-203ENST00000467911 FAT3Q8TDW7 4589 aa0.49□□□□□ -2.33
NCK1-203ENST00000467911 SVEP1Q4LDE5 3571 aa0.49□□□□□ -2.33
NCK1-203ENST00000467911 CSMD1Q96PZ7 3565 aa0.49□□□□□ -2.33
NCK1-203ENST00000467911 PHGR1C9JFL3 82 aa0.49□□□□□ -2.33
NCK1-203ENST00000467911 PRM1P04553 51 aa0.49□□□□□ -2.33
NCK1-203ENST00000467911 COX14Q96I36 57 aa0.49□□□□□ -2.33
NCK1-203ENST00000467911 DMXL1Q9Y485 3027 aa0.49□□□□□ -2.33
NCK1-203ENST00000467911 KALRNO60229 2985 aa0.49□□□□□ -2.33
NCK1-203ENST00000467911 WNK1Q9H4A3 2382 aa0.49□□□□□ -2.33
NCK1-203ENST00000467911 DNAH1Q9P2D7 4330 aa0.49□□□□□ -2.33
NCK1-203ENST00000467911 PLECQ15149 4684 aaKnown RBP0.49□□□□□ -2.33
NCK1-203ENST00000467911 CEP290O15078 2479 aa0.48□□□□□ -2.33
NCK1-203ENST00000467911 TRRAPQ9Y4A5 3859 aa0.48□□□□□ -2.33
NCK1-203ENST00000467911 MKI67P46013 3256 aaKnown RBP0.48□□□□□ -2.33
NCK1-203ENST00000467911 NF1P21359 2839 aa0.48□□□□□ -2.33
NCK1-203ENST00000467911 COL6A3P12111 3177 aa0.48□□□□□ -2.33
NCK1-203ENST00000467911 VPS13CQ709C8 3753 aa0.48□□□□□ -2.33
NCK1-203ENST00000467911 PIEZO1Q92508 2521 aa0.47□□□□□ -2.33
NCK1-203ENST00000467911 DNAH17Q9UFH2 4485 aa0.47□□□□□ -2.33
NCK1-203ENST00000467911 FLGP20930 4061 aaPredicted RBP0.47□□□□□ -2.33
NCK1-203ENST00000467911 ITPR3Q14573 2671 aa0.47□□□□□ -2.33
NCK1-203ENST00000467911 PKD1P98161 4303 aa0.47□□□□□ -2.33
NCK1-203ENST00000467911 FAT1Q14517 4588 aa0.47□□□□□ -2.33
NCK1-203ENST00000467911 TNXBP22105 4242 aa0.46□□□□□ -2.34
NCK1-203ENST00000467911 LPAP08519 4548 aa0.46□□□□□ -2.34
NCK1-203ENST00000467911 TACC2O95359 2948 aa0.46□□□□□ -2.34
NCK1-203ENST00000467911 TRIOO75962 3097 aa0.46□□□□□ -2.34
NCK1-203ENST00000467911 DEFB133Q30KQ1 61 aa0.46□□□□□ -2.34
NCK1-203ENST00000467911 DEFB124Q8NES8 71 aa0.46□□□□□ -2.34
NCK1-203ENST00000467911 PKHD1P08F94 4074 aa0.46□□□□□ -2.34
NCK1-203ENST00000467911 SYNE1Q8NF91 8797 aaKnown RBP0.46□□□□□ -2.34
NCK1-203ENST00000467911 COL7A1Q02388 2944 aa0.46□□□□□ -2.34
NCK1-203ENST00000467911 DYNC1H1Q14204 4646 aaKnown RBP0.46□□□□□ -2.34
NCK1-203ENST00000467911 DNAH5Q8TE73 4624 aa0.46□□□□□ -2.34
NCK1-203ENST00000467911 GCN1Q92616 2671 aaKnown RBP0.46□□□□□ -2.34
NCK1-203ENST00000467911 DMBT1Q9UGM3 2413 aaPredicted RBP0.46□□□□□ -2.34
NCK1-203ENST00000467911 CMYA5Q8N3K9 4069 aa0.45□□□□□ -2.34
NCK1-203ENST00000467911 LRP1Q07954 4544 aaKnown RBP0.45□□□□□ -2.34
NCK1-203ENST00000467911 PKD1L1Q8TDX9 2849 aa0.45□□□□□ -2.34
NCK1-203ENST00000467911 FLNCQ14315 2725 aa0.45□□□□□ -2.34
NCK1-203ENST00000467911 CELSR3Q9NYQ7 3312 aa0.45□□□□□ -2.34
NCK1-203ENST00000467911 SPTA1P02549 2419 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms