RNA–Protein interactions for RNA: ENST00000467911.1

NCK1-203, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-203ENST00000467911 AEBP2Q6ZN18 517 aaPredicted RBP29.81■■■□□ 2.36
NCK1-203ENST00000467911 CHIC1Q5VXU3 224 aa27.88■■■□□ 2.05
NCK1-203ENST00000467911 SENP3Q9H4L4 574 aaPredicted RBP25.29■■□□□ 1.64
NCK1-203ENST00000467911 PHF23Q9BUL5 403 aaPredicted RBP25■■□□□ 1.59
NCK1-203ENST00000467911 FOXD1Q16676 465 aa23.74■■□□□ 1.39
NCK1-203ENST00000467911 POTEDQ86YR6 584 aa22.35■■□□□ 1.17
NCK1-203ENST00000467911 MSH5O43196 834 aa22.19■■□□□ 1.14
NCK1-203ENST00000467911 PLPPR3Q6T4P5 718 aa22.06■■□□□ 1.12
NCK1-203ENST00000467911 PIAS4Q8N2W9 510 aaPredicted RBP22.05■■□□□ 1.12
NCK1-203ENST00000467911 PPP6R1Q9UPN7 881 aa22.01■■□□□ 1.11
NCK1-203ENST00000467911 ADRA2BP18089 450 aa21.89■■□□□ 1.09
NCK1-203ENST00000467911 MAPK8IP2Q13387 824 aaPredicted RBP20.24■□□□□ 0.83
NCK1-203ENST00000467911 DMRT2Q9Y5R5 561 aa20.05■□□□□ 0.8
NCK1-203ENST00000467911 SCAF1Q9H7N4 1312 aaKnown RBP19.81■□□□□ 0.76
NCK1-203ENST00000467911 PPP4R3CPQ6ZMV5 832 aa19.36■□□□□ 0.69
NCK1-203ENST00000467911 CACNB1Q02641 598 aaPredicted RBP19.3■□□□□ 0.68
NCK1-203ENST00000467911 DCAF8L1A6NGE4 600 aa19.25■□□□□ 0.67
NCK1-203ENST00000467911 HOXD11P31277 338 aaPredicted RBP19.19■□□□□ 0.66
NCK1-203ENST00000467911 CNKSR2Q8WXI2 1034 aa19.01■□□□□ 0.63
NCK1-203ENST00000467911 RNF39Q9H2S5 420 aa19■□□□□ 0.63
NCK1-203ENST00000467911 RNF216Q9NWF9 866 aaPredicted RBP18.93■□□□□ 0.62
NCK1-203ENST00000467911 C1QBPQ07021 282 aaKnown RBP18.62■□□□□ 0.57
NCK1-203ENST00000467911 DNAJC5BQ9UF47 199 aa18.49■□□□□ 0.55
NCK1-203ENST00000467911 NCBP3Q53F19 620 aaKnown RBP18.39■□□□□ 0.53
NCK1-203ENST00000467911 NPM3O75607 178 aaKnown RBP18.27■□□□□ 0.52
NCK1-203ENST00000467911 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.26■□□□□ 0.51
NCK1-203ENST00000467911 U3KPZ7 1027 aaPredicted RBP17.91■□□□□ 0.46
NCK1-203ENST00000467911 SPINK5Q9NQ38 1064 aaPredicted RBP17.79■□□□□ 0.44
NCK1-203ENST00000467911 DSG3P32926 999 aa17.7■□□□□ 0.42
NCK1-203ENST00000467911 CAPN15O75808 1086 aa17.69■□□□□ 0.42
NCK1-203ENST00000467911 KCNA4P22459 653 aa17.67■□□□□ 0.42
NCK1-203ENST00000467911 SLC4A2P04920 1241 aa17.58■□□□□ 0.4
NCK1-203ENST00000467911 POTEHQ6S545 545 aa17.42■□□□□ 0.38
NCK1-203ENST00000467911 TRHP20396 242 aaPredicted RBP17.34■□□□□ 0.37
NCK1-203ENST00000467911 ABCB7O75027 752 aa17.32■□□□□ 0.36
NCK1-203ENST00000467911 ZNF219Q9P2Y4 722 aaPredicted RBP17.21■□□□□ 0.35
NCK1-203ENST00000467911 APLP2Q06481 763 aa17.15■□□□□ 0.34
NCK1-203ENST00000467911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.1■□□□□ 0.33
NCK1-203ENST00000467911 HNRNPUL2Q1KMD3 747 aaKnown RBP17.1■□□□□ 0.33
NCK1-203ENST00000467911 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
NCK1-203ENST00000467911 MYCNP04198 464 aaPredicted RBP16.82■□□□□ 0.28
NCK1-203ENST00000467911 POLA2Q14181 598 aa16.81■□□□□ 0.28
NCK1-203ENST00000467911 RBM42Q9BTD8 480 aaKnown RBP16.75■□□□□ 0.27
NCK1-203ENST00000467911 ATF5Q9Y2D1 282 aaPredicted RBP16.63■□□□□ 0.25
NCK1-203ENST00000467911 CHRDL2Q6WN34 429 aa16.62■□□□□ 0.25
NCK1-203ENST00000467911 SLC4A1APQ9BWU0 796 aaKnown RBP16.54■□□□□ 0.24
NCK1-203ENST00000467911 FOXD4L1Q9NU39 408 aa16.5■□□□□ 0.23
NCK1-203ENST00000467911 AKT1S1Q96B36 256 aa16.35■□□□□ 0.21
NCK1-203ENST00000467911 ZBTB22O15209 634 aa16.31■□□□□ 0.2
NCK1-203ENST00000467911 OSCARQ8IYS5 282 aa16.31■□□□□ 0.2
NCK1-203ENST00000467911 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
NCK1-203ENST00000467911 REM2Q8IYK8 340 aaPredicted RBP16.26■□□□□ 0.19
NCK1-203ENST00000467911 PIP4P2Q8N4L2 257 aa16.19■□□□□ 0.18
NCK1-203ENST00000467911 SP7Q8TDD2 431 aaPredicted RBP16.16■□□□□ 0.18
NCK1-203ENST00000467911 PITPNM1O00562 1244 aa16.12■□□□□ 0.17
NCK1-203ENST00000467911 FXR2P51116 673 aaKnown RBP eCLIP16.01■□□□□ 0.15
NCK1-203ENST00000467911 ATXN8OSP0DMR3 200 aa15.96■□□□□ 0.15
NCK1-203ENST00000467911 HAX1O00165 279 aa15.94■□□□□ 0.14
NCK1-203ENST00000467911 EVX2Q03828 476 aa15.86■□□□□ 0.13
NCK1-203ENST00000467911 SPDYE2BA6NHP3 402 aa15.83■□□□□ 0.12
NCK1-203ENST00000467911 SPDYE6P0CI01 402 aa15.83■□□□□ 0.12
NCK1-203ENST00000467911 SPDYE2Q495Y8 402 aa15.83■□□□□ 0.12
NCK1-203ENST00000467911 MKRN4PQ13434 485 aaPredicted RBP15.82■□□□□ 0.12
NCK1-203ENST00000467911 FBLN2P98095 1184 aa15.79■□□□□ 0.12
NCK1-203ENST00000467911 CLEC11AQ9Y240 323 aa15.69■□□□□ 0.1
NCK1-203ENST00000467911 PRKAR2AP13861 404 aaKnown RBP15.67■□□□□ 0.1
NCK1-203ENST00000467911 SSUH2Q9Y2M2 353 aa15.64■□□□□ 0.09
NCK1-203ENST00000467911 ZNF692Q9BU19 519 aaPredicted RBP15.63■□□□□ 0.09
NCK1-203ENST00000467911 SPDYE1Q8NFV5 336 aaPredicted RBP15.62■□□□□ 0.09
NCK1-203ENST00000467911 C19orf67A6NJJ6 358 aa15.52■□□□□ 0.08
NCK1-203ENST00000467911 CHADLQ6NUI6 762 aa15.5■□□□□ 0.07
NCK1-203ENST00000467911 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
NCK1-203ENST00000467911 GABBR2O75899 941 aa15.39■□□□□ 0.05
NCK1-203ENST00000467911 PRR29P0C7W0 189 aa15.34■□□□□ 0.05
NCK1-203ENST00000467911 CSRNP3Q8WYN3 585 aa15.2■□□□□ 0.02
NCK1-203ENST00000467911 FARP1Q9Y4F1 1045 aaPredicted RBP15.16■□□□□ 0.02
NCK1-203ENST00000467911 CD44P16070 742 aaKnown RBP15.15■□□□□ 0.02
NCK1-203ENST00000467911 LHX8Q68G74 356 aa15.15■□□□□ 0.02
NCK1-203ENST00000467911 POTEIP0CG38 1075 aa15.13■□□□□ 0.01
NCK1-203ENST00000467911 CREBZFQ9NS37 354 aa14.96□□□□□ -0.01
NCK1-203ENST00000467911 ZNF579Q8NAF0 562 aaKnown RBP14.88□□□□□ -0.03
NCK1-203ENST00000467911 ZRANB1Q9UGI0 708 aa14.88□□□□□ -0.03
NCK1-203ENST00000467911 CLCN6P51797 869 aa14.84□□□□□ -0.03
NCK1-203ENST00000467911 DCBLD2Q96PD2 775 aa14.83□□□□□ -0.04
NCK1-203ENST00000467911 EHMT2Q96KQ7 1210 aa14.82□□□□□ -0.04
NCK1-203ENST00000467911 SPDYE4A6NLX3 237 aa14.81□□□□□ -0.04
NCK1-203ENST00000467911 STAG3Q9UJ98 1225 aa14.8□□□□□ -0.04
NCK1-203ENST00000467911 GALR2O43603 387 aaPredicted RBP14.79□□□□□ -0.04
NCK1-203ENST00000467911 PHF12Q96QT6 1004 aa14.71□□□□□ -0.05
NCK1-203ENST00000467911 MNX1P50219 401 aaPredicted RBP14.68□□□□□ -0.06
NCK1-203ENST00000467911 POTEB2H3BUK9 544 aa14.65□□□□□ -0.06
NCK1-203ENST00000467911 OTUD5Q96G74 571 aa14.6□□□□□ -0.07
NCK1-203ENST00000467911 PELP1Q8IZL8 1130 aaKnown RBP14.58□□□□□ -0.08
NCK1-203ENST00000467911 PAK3O75914 559 aaPredicted RBP14.57□□□□□ -0.08
NCK1-203ENST00000467911 NPM1P06748 294 aaKnown RBP eCLIP14.54□□□□□ -0.08
NCK1-203ENST00000467911 MS4A3Q96HJ5 214 aa14.48□□□□□ -0.09
NCK1-203ENST00000467911 PLSCR2Q9NRY7 297 aa14.46□□□□□ -0.09
NCK1-203ENST00000467911 PROM2Q8N271 834 aa14.43□□□□□ -0.1
NCK1-203ENST00000467911 ASTLQ6HA08 431 aaPredicted RBP14.41□□□□□ -0.1
NCK1-203ENST00000467911 ATMINO43313 823 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms