RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 HIST1H4AP62805 103 aaKnown RBP7.3□□□□□ -1.24
COL4A1-202ENST00000467182 PRR15Q8IV56 129 aa7.3□□□□□ -1.24
COL4A1-202ENST00000467182 A0A1B0GVX0 72 aa7.28□□□□□ -1.24
COL4A1-202ENST00000467182 RETNLBQ9BQ08 111 aa7.28□□□□□ -1.24
COL4A1-202ENST00000467182 NOTCH2NLQ7Z3S9 236 aa7.26□□□□□ -1.25
COL4A1-202ENST00000467182 MMP24-AS1A0A0U1RRL7 71 aa7.25□□□□□ -1.25
COL4A1-202ENST00000467182 NDUFB1O75438 58 aa7.25□□□□□ -1.25
COL4A1-202ENST00000467182 IGHV6-1A0A0B4J1U7 121 aa7.24□□□□□ -1.25
COL4A1-202ENST00000467182 C8orf17Q9NRJ1 99 aa7.23□□□□□ -1.25
COL4A1-202ENST00000467182 DMBT1Q9UGM3 2413 aaPredicted RBP7.23□□□□□ -1.25
COL4A1-202ENST00000467182 FAM236AA0A1B0GUQ0 79 aa7.21□□□□□ -1.26
COL4A1-202ENST00000467182 FAM236BA0A1B0GV22 79 aa7.21□□□□□ -1.26
COL4A1-202ENST00000467182 HCG22E2RYF7 251 aa7.21□□□□□ -1.26
COL4A1-202ENST00000467182 C8orf87E5RJ46 101 aa7.2□□□□□ -1.26
COL4A1-202ENST00000467182 J3QL48 77 aa7.2□□□□□ -1.26
COL4A1-202ENST00000467182 FP248Q71RG6 208 aaPredicted RBP7.2□□□□□ -1.26
COL4A1-202ENST00000467182 KRTAP16-1A8MUX0 517 aa7.19□□□□□ -1.26
COL4A1-202ENST00000467182 SCGB1A1P11684 91 aa7.19□□□□□ -1.26
COL4A1-202ENST00000467182 WFDC13Q8IUB5 93 aa7.19□□□□□ -1.26
COL4A1-202ENST00000467182 LINC00313P59037 77 aa7.17□□□□□ -1.26
COL4A1-202ENST00000467182 CASC2Q6XLA1 102 aa7.17□□□□□ -1.26
COL4A1-202ENST00000467182 hDV103S1A0JD37 113 aa7.16□□□□□ -1.26
COL4A1-202ENST00000467182 TMEM254Q8TBM7 123 aa7.16□□□□□ -1.26
COL4A1-202ENST00000467182 IGLV7-46A0A075B6I9 117 aa7.13□□□□□ -1.27
COL4A1-202ENST00000467182 MRPL34Q9BQ48 92 aaKnown RBP7.13□□□□□ -1.27
COL4A1-202ENST00000467182 C9orf92A6NGG3 77 aa7.12□□□□□ -1.27
COL4A1-202ENST00000467182 KRTAP13-3Q3SY46 172 aa7.11□□□□□ -1.27
COL4A1-202ENST00000467182 ATOX1O00244 68 aa7.1□□□□□ -1.27
COL4A1-202ENST00000467182 PRR4Q16378 134 aa7.1□□□□□ -1.27
COL4A1-202ENST00000467182 Q8N9P0 234 aaPredicted RBP7.1□□□□□ -1.27
COL4A1-202ENST00000467182 OCR1Q9BZK8 76 aa7.1□□□□□ -1.27
COL4A1-202ENST00000467182 HERC1Q15751 4861 aa7.08□□□□□ -1.28
COL4A1-202ENST00000467182 LPAP08519 4548 aa7.08□□□□□ -1.28
COL4A1-202ENST00000467182 A8MUU9 505 aa7.05□□□□□ -1.28
COL4A1-202ENST00000467182 TPRXLQ17RH7 258 aa7.05□□□□□ -1.28
COL4A1-202ENST00000467182 C20orf166-AS1Q96NR2 134 aa7.05□□□□□ -1.28
COL4A1-202ENST00000467182 HMCN2Q8NDA2 5059 aa7.05□□□□□ -1.28
COL4A1-202ENST00000467182 TRAV7A0A075B6U4 112 aa7.04□□□□□ -1.28
COL4A1-202ENST00000467182 XP32Q5T750 250 aa7.03□□□□□ -1.28
COL4A1-202ENST00000467182 SMIM20Q8N5G0 67 aa7.03□□□□□ -1.28
COL4A1-202ENST00000467182 NDUFS5O43920 106 aa7.02□□□□□ -1.29
COL4A1-202ENST00000467182 SERP2Q8N6R1 65 aa7.02□□□□□ -1.29
COL4A1-202ENST00000467182 ANAPC13Q9BS18 74 aa7.02□□□□□ -1.29
COL4A1-202ENST00000467182 TP53AIP1Q9HCN2 124 aa7.01□□□□□ -1.29
COL4A1-202ENST00000467182 UQCRQO14949 82 aa7□□□□□ -1.29
COL4A1-202ENST00000467182 Q75L30 129 aa7□□□□□ -1.29
COL4A1-202ENST00000467182 LRP2P98164 4655 aa6.99□□□□□ -1.29
COL4A1-202ENST00000467182 Q5W150 140 aa6.99□□□□□ -1.29
COL4A1-202ENST00000467182 MUC17Q685J3 4493 aa6.98□□□□□ -1.29
COL4A1-202ENST00000467182 COX7CP15954 63 aa6.98□□□□□ -1.29
COL4A1-202ENST00000467182 RPL37P61927 97 aaKnown RBP6.97□□□□□ -1.29
COL4A1-202ENST00000467182 TRAV22A0A0B4J277 110 aa6.94□□□□□ -1.3
COL4A1-202ENST00000467182 C5orf47Q569G3 176 aa6.94□□□□□ -1.3
COL4A1-202ENST00000467182 ZCCHC13Q8WW36 166 aaKnown RBP6.94□□□□□ -1.3
COL4A1-202ENST00000467182 H0Y9P7 68 aa6.93□□□□□ -1.3
COL4A1-202ENST00000467182 PCP4P48539 62 aa6.93□□□□□ -1.3
COL4A1-202ENST00000467182 CCDC179H3BU77 68 aa6.92□□□□□ -1.3
COL4A1-202ENST00000467182 A0A0U1RQV1 116 aa6.91□□□□□ -1.3
COL4A1-202ENST00000467182 C20orf197Q8N268 126 aa6.89□□□□□ -1.31
COL4A1-202ENST00000467182 MP68P56378 58 aa6.88□□□□□ -1.31
COL4A1-202ENST00000467182 KRTAP3-3Q9BYR6 98 aa6.88□□□□□ -1.31
COL4A1-202ENST00000467182 KRTAP3-2Q9BYR7 98 aa6.88□□□□□ -1.31
COL4A1-202ENST00000467182 H3BPC8 53 aa6.87□□□□□ -1.31
COL4A1-202ENST00000467182 LINC00208Q96KT6 92 aa6.87□□□□□ -1.31
COL4A1-202ENST00000467182 CYSTM1Q9H1C7 97 aa6.87□□□□□ -1.31
COL4A1-202ENST00000467182 KLKP1Q107X0 134 aa6.86□□□□□ -1.31
COL4A1-202ENST00000467182 SNURFQ9Y675 71 aa6.86□□□□□ -1.31
COL4A1-202ENST00000467182 IGKV2-30P06310 120 aa6.85□□□□□ -1.31
COL4A1-202ENST00000467182 ATP11AUNQ6ZP68 121 aa6.85□□□□□ -1.31
COL4A1-202ENST00000467182 C1orf64Q8NEQ6 169 aa6.85□□□□□ -1.31
COL4A1-202ENST00000467182 LOC101927531A0A1B0GV80 90 aa6.83□□□□□ -1.32
COL4A1-202ENST00000467182 PCOTHQ58A44 107 aa6.83□□□□□ -1.32
COL4A1-202ENST00000467182 CYP4F30PQ9H0H9 118 aa6.81□□□□□ -1.32
COL4A1-202ENST00000467182 IGKV2D-30A0A075B6S6 120 aa6.79□□□□□ -1.32
COL4A1-202ENST00000467182 SPINK7P58062 85 aa6.77□□□□□ -1.33
COL4A1-202ENST00000467182 SEC61BP60468 96 aaKnown RBP6.77□□□□□ -1.33
COL4A1-202ENST00000467182 C7orf65Q6ZTY9 151 aa6.77□□□□□ -1.33
COL4A1-202ENST00000467182 H7BZZ5 65 aa6.76□□□□□ -1.33
COL4A1-202ENST00000467182 KRTAP4-1Q9BYQ7 146 aa6.74□□□□□ -1.33
COL4A1-202ENST00000467182 NDUFC1O43677 76 aa6.72□□□□□ -1.33
COL4A1-202ENST00000467182 HRES1P13985 223 aa6.7□□□□□ -1.34
COL4A1-202ENST00000467182 UBR4Q5T4S7 5183 aa6.67□□□□□ -1.34
COL4A1-202ENST00000467182 SPANXA2-OT1Q8N9U9 137 aa6.66□□□□□ -1.34
COL4A1-202ENST00000467182 MPLKIPQ8TAP9 179 aa6.65□□□□□ -1.34
COL4A1-202ENST00000467182 RNF213Q63HN8 5207 aa6.65□□□□□ -1.35
COL4A1-202ENST00000467182 C4orf26Q17RF5 130 aa6.64□□□□□ -1.35
COL4A1-202ENST00000467182 TMEM258P61165 79 aa6.63□□□□□ -1.35
COL4A1-202ENST00000467182 KRTAP3-1Q9BYR8 98 aa6.62□□□□□ -1.35
COL4A1-202ENST00000467182 FAM236DA0A1B0GTK5 79 aa6.59□□□□□ -1.35
COL4A1-202ENST00000467182 FAM236CP0DP71 79 aa6.59□□□□□ -1.35
COL4A1-202ENST00000467182 COX6B2Q6YFQ2 88 aa6.59□□□□□ -1.35
COL4A1-202ENST00000467182 MUC2Q02817 5179 aa6.58□□□□□ -1.36
COL4A1-202ENST00000467182 DMAC1Q96GE9 116 aa6.58□□□□□ -1.36
COL4A1-202ENST00000467182 KRTAP19-2Q3LHN2 52 aa6.57□□□□□ -1.36
COL4A1-202ENST00000467182 ATP5EP56381 51 aaPredicted RBP6.56□□□□□ -1.36
COL4A1-202ENST00000467182 A8MUN3 132 aa6.52□□□□□ -1.37
COL4A1-202ENST00000467182 RBM12B-AS1Q9P1G2 102 aa6.51□□□□□ -1.37
COL4A1-202ENST00000467182 ACYP2P14621 99 aa6.48□□□□□ -1.37
COL4A1-202ENST00000467182 H1FX-AS1Q4G0G2 97 aa6.45□□□□□ -1.38
COL4A1-202ENST00000467182 LCE2CQ5TA81 110 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms