RNA–Protein interactions for RNA: ENST00000459877.1

KCNC4-205, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 7,597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-205ENST00000459877 SPEGQ15772 3267 aa4.99□□□□□ -1.61
KCNC4-205ENST00000459877 DSPP15924 2871 aaKnown RBP4.98□□□□□ -1.61
KCNC4-205ENST00000459877 MAP1AP78559 2803 aaPredicted RBP4.97□□□□□ -1.61
KCNC4-205ENST00000459877 KRTAP13-1Q8IUC0 172 aa4.96□□□□□ -1.61
KCNC4-205ENST00000459877 KALRNO60229 2985 aa4.96□□□□□ -1.62
KCNC4-205ENST00000459877 NSD1Q96L73 2696 aaPredicted RBP4.95□□□□□ -1.62
KCNC4-205ENST00000459877 ASPMQ8IZT6 3477 aa4.93□□□□□ -1.62
KCNC4-205ENST00000459877 UBR5O95071 2799 aaPredicted RBP4.92□□□□□ -1.62
KCNC4-205ENST00000459877 KRTAP10-10P60014 251 aa4.92□□□□□ -1.62
KCNC4-205ENST00000459877 UTP20O75691 2785 aaKnown RBP4.91□□□□□ -1.62
KCNC4-205ENST00000459877 WDFY3Q8IZQ1 3526 aa4.91□□□□□ -1.62
KCNC4-205ENST00000459877 XP32Q5T750 250 aa4.9□□□□□ -1.62
KCNC4-205ENST00000459877 CFAP47Q6ZTR5 3102 aa4.9□□□□□ -1.63
KCNC4-205ENST00000459877 FRYLO94915 3013 aa4.89□□□□□ -1.63
KCNC4-205ENST00000459877 TENM4Q6N022 2769 aa4.89□□□□□ -1.63
KCNC4-205ENST00000459877 ITPR2Q14571 2701 aa4.89□□□□□ -1.63
KCNC4-205ENST00000459877 BOD1L1Q8NFC6 3051 aa4.88□□□□□ -1.63
KCNC4-205ENST00000459877 LRBAP50851 2863 aa4.88□□□□□ -1.63
KCNC4-205ENST00000459877 NBEAQ8NFP9 2946 aa4.87□□□□□ -1.63
KCNC4-205ENST00000459877 CRYBG3Q68DQ2 2970 aa4.85□□□□□ -1.63
KCNC4-205ENST00000459877 TNRC18O15417 2968 aaPredicted RBP4.82□□□□□ -1.64
KCNC4-205ENST00000459877 DCHS1Q96JQ0 3298 aa4.82□□□□□ -1.64
KCNC4-205ENST00000459877 H0YAA0 97 aa4.81□□□□□ -1.64
KCNC4-205ENST00000459877 ASH1LQ9NR48 2969 aaKnown RBP4.8□□□□□ -1.64
KCNC4-205ENST00000459877 HIVEP1P15822 2718 aa4.8□□□□□ -1.64
KCNC4-205ENST00000459877 PRO2289Q9P1D8 64 aa4.79□□□□□ -1.64
KCNC4-205ENST00000459877 KMT2BQ9UMN6 2715 aaPredicted RBP4.79□□□□□ -1.64
KCNC4-205ENST00000459877 PP632Q6XCG6 107 aa4.78□□□□□ -1.64
KCNC4-205ENST00000459877 NBEAL2Q6ZNJ1 2754 aa4.78□□□□□ -1.64
KCNC4-205ENST00000459877 P0C880 135 aa4.77□□□□□ -1.65
KCNC4-205ENST00000459877 KRTAP1-4P0C5Y4 121 aa4.77□□□□□ -1.65
KCNC4-205ENST00000459877 DMXL2Q8TDJ6 3036 aa4.76□□□□□ -1.65
KCNC4-205ENST00000459877 DMXL1Q9Y485 3027 aa4.76□□□□□ -1.65
KCNC4-205ENST00000459877 NBPF19A0A087WUL8 3843 aa4.76□□□□□ -1.65
KCNC4-205ENST00000459877 TACC2O95359 2948 aa4.75□□□□□ -1.65
KCNC4-205ENST00000459877 ITPR1Q14643 2758 aa4.75□□□□□ -1.65
KCNC4-205ENST00000459877 COL12A1Q99715 3063 aa4.74□□□□□ -1.65
KCNC4-205ENST00000459877 APCP25054 2843 aa4.74□□□□□ -1.65
KCNC4-205ENST00000459877 LOC400499M0QZD8 3231 aa4.73□□□□□ -1.65
KCNC4-205ENST00000459877 TPRXLQ17RH7 258 aa4.73□□□□□ -1.65
KCNC4-205ENST00000459877 ADGRG4Q8IZF6 3080 aa4.72□□□□□ -1.65
KCNC4-205ENST00000459877 ATMQ13315 3056 aa4.71□□□□□ -1.66
KCNC4-205ENST00000459877 LAMA5O15230 3695 aa4.69□□□□□ -1.66
KCNC4-205ENST00000459877 ZZEF1O43149 2961 aa4.68□□□□□ -1.66
KCNC4-205ENST00000459877 CSMD1Q96PZ7 3565 aa4.66□□□□□ -1.66
KCNC4-205ENST00000459877 KRTAP13-3Q3SY46 172 aa4.66□□□□□ -1.66
KCNC4-205ENST00000459877 DMDP11532 3685 aa4.65□□□□□ -1.67
KCNC4-205ENST00000459877 TENM3Q9P273 2699 aa4.63□□□□□ -1.67
KCNC4-205ENST00000459877 ZFHX4Q86UP3 3567 aa4.62□□□□□ -1.67
KCNC4-205ENST00000459877 KRTAP12-2P59991 146 aa4.61□□□□□ -1.67
KCNC4-205ENST00000459877 RELNP78509 3460 aa4.57□□□□□ -1.68
KCNC4-205ENST00000459877 NIPBLQ6KC79 2804 aaeCLIP4.55□□□□□ -1.68
KCNC4-205ENST00000459877 SPENQ96T58 3664 aaKnown RBP4.52□□□□□ -1.69
KCNC4-205ENST00000459877 TENM1Q9UKZ4 2725 aa4.5□□□□□ -1.69
KCNC4-205ENST00000459877 TENM2Q9NT68 2774 aa4.5□□□□□ -1.69
KCNC4-205ENST00000459877 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
KCNC4-205ENST00000459877 CRCT1Q9UGL9 99 aa4.46□□□□□ -1.7
KCNC4-205ENST00000459877 SMG1Q96Q15 3661 aaKnown RBP4.46□□□□□ -1.7
KCNC4-205ENST00000459877 CELSR2Q9HCU4 2923 aa4.45□□□□□ -1.7
KCNC4-205ENST00000459877 KRTAP13-4Q3LI77 160 aa4.45□□□□□ -1.7
KCNC4-205ENST00000459877 MUC3AQ02505 3323 aa4.43□□□□□ -1.7
KCNC4-205ENST00000459877 KRTAP12-1P59990 96 aa4.4□□□□□ -1.7
KCNC4-205ENST00000459877 HRNRQ86YZ3 2850 aaPredicted RBP4.4□□□□□ -1.71
KCNC4-205ENST00000459877 CELSR1Q9NYQ6 3014 aa4.39□□□□□ -1.71
KCNC4-205ENST00000459877 NF1P21359 2839 aa4.39□□□□□ -1.71
KCNC4-205ENST00000459877 SVEP1Q4LDE5 3571 aa4.37□□□□□ -1.71
KCNC4-205ENST00000459877 BSNQ9UPA5 3926 aa4.36□□□□□ -1.71
KCNC4-205ENST00000459877 FBN2P35556 2912 aa4.36□□□□□ -1.71
KCNC4-205ENST00000459877 AKAP9Q99996 3911 aa4.34□□□□□ -1.71
KCNC4-205ENST00000459877 DCHS2Q6V1P9 2916 aa4.33□□□□□ -1.72
KCNC4-205ENST00000459877 ZANQ9Y493 2812 aa4.33□□□□□ -1.72
KCNC4-205ENST00000459877 ZFHX3Q15911 3703 aa4.33□□□□□ -1.72
KCNC4-205ENST00000459877 PKD1L1Q8TDX9 2849 aa4.32□□□□□ -1.72
KCNC4-205ENST00000459877 CUBNO60494 3623 aa4.31□□□□□ -1.72
KCNC4-205ENST00000459877 ANK3Q12955 4377 aaKnown RBP4.3□□□□□ -1.72
KCNC4-205ENST00000459877 VPS13CQ709C8 3753 aa4.29□□□□□ -1.72
KCNC4-205ENST00000459877 KRTAP3-1Q9BYR8 98 aa4.28□□□□□ -1.72
KCNC4-205ENST00000459877 TGP01266 2768 aa4.26□□□□□ -1.73
KCNC4-205ENST00000459877 MXRA5Q9NR99 2828 aa4.23□□□□□ -1.73
KCNC4-205ENST00000459877 PDZD2O15018 2839 aa4.23□□□□□ -1.73
KCNC4-205ENST00000459877 HUWE1Q7Z6Z7 4374 aaKnown RBP4.21□□□□□ -1.74
KCNC4-205ENST00000459877 CSMD2Q7Z408 3487 aa4.2□□□□□ -1.74
KCNC4-205ENST00000459877 ALMS1Q8TCU4 4167 aa4.2□□□□□ -1.74
KCNC4-205ENST00000459877 FBN3Q75N90 2809 aa4.19□□□□□ -1.74
KCNC4-205ENST00000459877 SRRM2Q9UQ35 2752 aaKnown RBP4.18□□□□□ -1.74
KCNC4-205ENST00000459877 KRTAP10-12P60413 245 aa4.17□□□□□ -1.74
KCNC4-205ENST00000459877 VWFP04275 2813 aa4.15□□□□□ -1.74
KCNC4-205ENST00000459877 KRTAP10-6P60371 365 aaPredicted RBP4.13□□□□□ -1.75
KCNC4-205ENST00000459877 TRRAPQ9Y4A5 3859 aa4.12□□□□□ -1.75
KCNC4-205ENST00000459877 CSMD3Q7Z407 3707 aa4.1□□□□□ -1.75
KCNC4-205ENST00000459877 KRTAP4-5Q9BYR2 181 aa4.08□□□□□ -1.76
KCNC4-205ENST00000459877 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
KCNC4-205ENST00000459877 INE1O15225 51 aa4.03□□□□□ -1.76
KCNC4-205ENST00000459877 MT1HL1P0DM35 61 aa4.02□□□□□ -1.77
KCNC4-205ENST00000459877 ZNF469Q96JG9 3925 aaPredicted RBP4.02□□□□□ -1.77
KCNC4-205ENST00000459877 KRTAP12-3P60328 96 aa4□□□□□ -1.77
KCNC4-205ENST00000459877 KRTAP3-3Q9BYR6 98 aa3.99□□□□□ -1.77
KCNC4-205ENST00000459877 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
KCNC4-205ENST00000459877 COL7A1Q02388 2944 aa3.96□□□□□ -1.78
KCNC4-205ENST00000459877 KRTAP3-2Q9BYR7 98 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms