RNA–Protein interactions for RNA: ENST00000459877.1

KCNC4-205, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 7,597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-205ENST00000459877 DCAF8L2P0C7V8 631 aa16.03■□□□□ 0.16
KCNC4-205ENST00000459877 EHMT2Q96KQ7 1210 aa15.11■□□□□ 0.01
KCNC4-205ENST00000459877 SUPT5HO00267 1087 aaKnown RBP15□□□□□ -0.01
KCNC4-205ENST00000459877 SHROOM4Q9ULL8 1493 aa14.77□□□□□ -0.04
KCNC4-205ENST00000459877 PELP1Q8IZL8 1130 aaKnown RBP14.57□□□□□ -0.08
KCNC4-205ENST00000459877 TTBK1Q5TCY1 1321 aaPredicted RBP14.57□□□□□ -0.08
KCNC4-205ENST00000459877 APLP2Q06481 763 aa14.43□□□□□ -0.1
KCNC4-205ENST00000459877 RANGAP1P46060 587 aaPredicted RBP14.36□□□□□ -0.11
KCNC4-205ENST00000459877 FAM9AQ8IZU1 332 aaPredicted RBP14.32□□□□□ -0.12
KCNC4-205ENST00000459877 ERICH6Q7L0X2 663 aa14.26□□□□□ -0.13
KCNC4-205ENST00000459877 ATP1B4Q9UN42 357 aaPredicted RBP14.22□□□□□ -0.13
KCNC4-205ENST00000459877 PCGF6Q9BYE7 350 aa14.14□□□□□ -0.15
KCNC4-205ENST00000459877 NISCHQ9Y2I1 1504 aa14.06□□□□□ -0.16
KCNC4-205ENST00000459877 CCER1Q8TC90 406 aaPredicted RBP13.96□□□□□ -0.18
KCNC4-205ENST00000459877 YTHDC1Q96MU7 727 aaKnown RBP13.94□□□□□ -0.18
KCNC4-205ENST00000459877 CENPBP07199 599 aaPredicted RBP13.86□□□□□ -0.19
KCNC4-205ENST00000459877 MYT1Q01538 1121 aa13.84□□□□□ -0.19
KCNC4-205ENST00000459877 PPARGC1BQ86YN6 1023 aaKnown RBP13.79□□□□□ -0.2
KCNC4-205ENST00000459877 UBTFP17480 764 aaKnown RBP13.78□□□□□ -0.2
KCNC4-205ENST00000459877 MYT1LQ9UL68 1186 aa13.77□□□□□ -0.21
KCNC4-205ENST00000459877 NEFLP07196 543 aa13.76□□□□□ -0.21
KCNC4-205ENST00000459877 CHIC1Q5VXU3 224 aa13.75□□□□□ -0.21
KCNC4-205ENST00000459877 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
KCNC4-205ENST00000459877 POLR3GLQ9BT43 218 aa13.73□□□□□ -0.21
KCNC4-205ENST00000459877 CNGB1Q14028 1251 aaPredicted RBP13.69□□□□□ -0.22
KCNC4-205ENST00000459877 ZEB1P37275 1124 aaPredicted RBP13.61□□□□□ -0.23
KCNC4-205ENST00000459877 ITGAEP38570 1179 aa13.59□□□□□ -0.23
KCNC4-205ENST00000459877 DAXXQ9UER7 740 aaPredicted RBP13.58□□□□□ -0.24
KCNC4-205ENST00000459877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.58□□□□□ -0.24
KCNC4-205ENST00000459877 HNRNPUL2Q1KMD3 747 aaKnown RBP13.58□□□□□ -0.24
KCNC4-205ENST00000459877 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
KCNC4-205ENST00000459877 ZNF316A6NFI3 1004 aaPredicted RBP13.29□□□□□ -0.28
KCNC4-205ENST00000459877 CLSPNQ9HAW4 1339 aa13.28□□□□□ -0.28
KCNC4-205ENST00000459877 BCL11AQ9H165 835 aa13.23□□□□□ -0.29
KCNC4-205ENST00000459877 SLC24A1O60721 1099 aa13.2□□□□□ -0.3
KCNC4-205ENST00000459877 TRIM26Q12899 539 aaPredicted RBP13.19□□□□□ -0.3
KCNC4-205ENST00000459877 LOC105371045A0A1W2PR82 267 aa13.14□□□□□ -0.31
KCNC4-205ENST00000459877 FAM50AQ14320 339 aaKnown RBP13.12□□□□□ -0.31
KCNC4-205ENST00000459877 HRCP23327 699 aa13.11□□□□□ -0.31
KCNC4-205ENST00000459877 RTL5Q5HYW3 569 aaPredicted RBP13.11□□□□□ -0.31
KCNC4-205ENST00000459877 TRIM52Q96A61 297 aa13.09□□□□□ -0.31
KCNC4-205ENST00000459877 NEUROD1Q13562 356 aa13.07□□□□□ -0.32
KCNC4-205ENST00000459877 BCANQ96GW7 911 aa13.06□□□□□ -0.32
KCNC4-205ENST00000459877 ZNF326Q5BKZ1 582 aaKnown RBP13.04□□□□□ -0.32
KCNC4-205ENST00000459877 ZBTB47Q9UFB7 747 aaPredicted RBP12.98□□□□□ -0.33
KCNC4-205ENST00000459877 PLPPR3Q6T4P5 718 aa12.94□□□□□ -0.34
KCNC4-205ENST00000459877 DIEXFQ68CQ4 756 aaKnown RBP12.94□□□□□ -0.34
KCNC4-205ENST00000459877 FBLN2P98095 1184 aa12.93□□□□□ -0.34
KCNC4-205ENST00000459877 CANXP27824 592 aaKnown RBP12.93□□□□□ -0.34
KCNC4-205ENST00000459877 ARID3CA6NKF2 412 aa12.89□□□□□ -0.35
KCNC4-205ENST00000459877 PABPN1Q86U42 306 aaKnown RBP eCLIP12.83□□□□□ -0.36
KCNC4-205ENST00000459877 ANP32CO43423 234 aa12.8□□□□□ -0.36
KCNC4-205ENST00000459877 CDK11AQ9UQ88 783 aaPredicted RBP12.79□□□□□ -0.36
KCNC4-205ENST00000459877 NPM2Q86SE8 214 aaKnown RBP12.78□□□□□ -0.36
KCNC4-205ENST00000459877 NEFMP07197 916 aa12.75□□□□□ -0.37
KCNC4-205ENST00000459877 P3H3Q8IVL6 736 aa12.74□□□□□ -0.37
KCNC4-205ENST00000459877 GTF3C3Q9Y5Q9 886 aa12.72□□□□□ -0.37
KCNC4-205ENST00000459877 ZNF777Q9ULD5 760 aaPredicted RBP12.71□□□□□ -0.37
KCNC4-205ENST00000459877 CHGAP10645 457 aaKnown RBP12.65□□□□□ -0.38
KCNC4-205ENST00000459877 ABCC9O60706 1549 aa12.65□□□□□ -0.38
KCNC4-205ENST00000459877 SCAF1Q9H7N4 1312 aaKnown RBP12.64□□□□□ -0.39
KCNC4-205ENST00000459877 STAG3Q9UJ98 1225 aa12.63□□□□□ -0.39
KCNC4-205ENST00000459877 PLEKHG5O94827 1062 aa12.62□□□□□ -0.39
KCNC4-205ENST00000459877 SENP3Q9H4L4 574 aaPredicted RBP12.62□□□□□ -0.39
KCNC4-205ENST00000459877 ESF1Q9H501 851 aaKnown RBP12.62□□□□□ -0.39
KCNC4-205ENST00000459877 A0A0G2JS52 829 aa12.61□□□□□ -0.39
KCNC4-205ENST00000459877 HSP90AA1P07900 732 aaKnown RBP12.6□□□□□ -0.39
KCNC4-205ENST00000459877 ANP32AP39687 249 aaKnown RBP12.6□□□□□ -0.39
KCNC4-205ENST00000459877 SALL2Q9Y467 1007 aaPredicted RBP12.59□□□□□ -0.39
KCNC4-205ENST00000459877 ARXQ96QS3 562 aa12.59□□□□□ -0.39
KCNC4-205ENST00000459877 EIF5BO60841 1220 aaKnown RBP12.56□□□□□ -0.4
KCNC4-205ENST00000459877 ZBTB7CA1YPR0 619 aa12.54□□□□□ -0.4
KCNC4-205ENST00000459877 ANP32BQ92688 251 aaKnown RBP12.52□□□□□ -0.4
KCNC4-205ENST00000459877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.48□□□□□ -0.41
KCNC4-205ENST00000459877 FAM9BQ8IZU0 186 aa12.47□□□□□ -0.41
KCNC4-205ENST00000459877 FKBP8Q14318 412 aa12.46□□□□□ -0.41
KCNC4-205ENST00000459877 NBR1Q14596 966 aa12.46□□□□□ -0.42
KCNC4-205ENST00000459877 TULP1O00294 542 aaPredicted RBP12.43□□□□□ -0.42
KCNC4-205ENST00000459877 UPF2Q9HAU5 1272 aaKnown RBP12.42□□□□□ -0.42
KCNC4-205ENST00000459877 C14orf37Q86TY3 774 aa12.4□□□□□ -0.42
KCNC4-205ENST00000459877 HNRNPUQ00839 825 aaKnown RBP eCLIP12.38□□□□□ -0.43
KCNC4-205ENST00000459877 KDM2AQ9Y2K7 1162 aa12.37□□□□□ -0.43
KCNC4-205ENST00000459877 TPRNQ4KMQ1 711 aa12.37□□□□□ -0.43
KCNC4-205ENST00000459877 CHIC2Q9UKJ5 165 aa12.37□□□□□ -0.43
KCNC4-205ENST00000459877 CDK11BP21127 795 aaKnown RBP12.36□□□□□ -0.43
KCNC4-205ENST00000459877 TONSLQ96HA7 1378 aa12.34□□□□□ -0.43
KCNC4-205ENST00000459877 IRX6P78412 446 aaPredicted RBP12.34□□□□□ -0.43
KCNC4-205ENST00000459877 NPM1P06748 294 aaKnown RBP eCLIP12.33□□□□□ -0.44
KCNC4-205ENST00000459877 DDX10Q13206 875 aaKnown RBP12.33□□□□□ -0.44
KCNC4-205ENST00000459877 WDR43Q15061 677 aaKnown RBP eCLIP12.32□□□□□ -0.44
KCNC4-205ENST00000459877 ACIN1Q9UKV3 1341 aaKnown RBP12.31□□□□□ -0.44
KCNC4-205ENST00000459877 TAOK2Q9UL54 1235 aa12.31□□□□□ -0.44
KCNC4-205ENST00000459877 SENP3-EIF4A1A0A087X0R7 540 aa12.3□□□□□ -0.44
KCNC4-205ENST00000459877 TMC1Q8TDI8 760 aa12.29□□□□□ -0.44
KCNC4-205ENST00000459877 SCRIBQ14160 1630 aa12.28□□□□□ -0.44
KCNC4-205ENST00000459877 HIRIP3Q9BW71 556 aaPredicted RBP12.28□□□□□ -0.44
KCNC4-205ENST00000459877 CCDC136Q96JN2 1154 aa12.27□□□□□ -0.45
KCNC4-205ENST00000459877 MYH16Q9H6N6 1097 aa12.26□□□□□ -0.45
KCNC4-205ENST00000459877 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.25□□□□□ -0.45
KCNC4-205ENST00000459877 HAP1P54257 671 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms