RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 TRBV7-4A0A0J9YYF1 115 aa6.4□□□□□ -1.38
SF3B4-202ENST00000457312 KRTAP10-7P60409 375 aaPredicted RBP6.4□□□□□ -1.38
SF3B4-202ENST00000457312 C12orf57Q99622 126 aa6.39□□□□□ -1.39
SF3B4-202ENST00000457312 S4R3F8 94 aa6.39□□□□□ -1.39
SF3B4-202ENST00000457312 SCGB1D4Q6XE38 83 aa6.38□□□□□ -1.39
SF3B4-202ENST00000457312 FABP4P15090 132 aa6.37□□□□□ -1.39
SF3B4-202ENST00000457312 KRTAP4-6Q9BYQ5 205 aa6.37□□□□□ -1.39
SF3B4-202ENST00000457312 LINC00310P59036 64 aa6.36□□□□□ -1.39
SF3B4-202ENST00000457312 KRTAP10-12P60413 245 aa6.36□□□□□ -1.39
SF3B4-202ENST00000457312 TRGC2P03986 189 aa6.35□□□□□ -1.39
SF3B4-202ENST00000457312 C4orf26Q17RF5 130 aa6.33□□□□□ -1.4
SF3B4-202ENST00000457312 IGKV2D-30A0A075B6S6 120 aa6.32□□□□□ -1.4
SF3B4-202ENST00000457312 IGKV2-30P06310 120 aa6.32□□□□□ -1.4
SF3B4-202ENST00000457312 AHNAKQ09666 5890 aaKnown RBP6.32□□□□□ -1.4
SF3B4-202ENST00000457312 TMEM218A2RU14 115 aa6.3□□□□□ -1.4
SF3B4-202ENST00000457312 BVES-AS1Q5T3Y7 98 aa6.3□□□□□ -1.4
SF3B4-202ENST00000457312 hCG_2014768A0A024R1R8 64 aa6.28□□□□□ -1.4
SF3B4-202ENST00000457312 C7orf65Q6ZTY9 151 aa6.28□□□□□ -1.4
SF3B4-202ENST00000457312 C8orf17Q9NRJ1 99 aa6.28□□□□□ -1.4
SF3B4-202ENST00000457312 ANKRD29Q8N6D5 301 aa6.26□□□□□ -1.41
SF3B4-202ENST00000457312 PLAC4Q8WY50 150 aa6.26□□□□□ -1.41
SF3B4-202ENST00000457312 TRACP01848 142 aa6.25□□□□□ -1.41
SF3B4-202ENST00000457312 KRTAP5-4Q6L8H1 288 aa6.25□□□□□ -1.41
SF3B4-202ENST00000457312 C2orf91Q6ZV80 131 aa6.25□□□□□ -1.41
SF3B4-202ENST00000457312 KRTAP3-1Q9BYR8 98 aa6.25□□□□□ -1.41
SF3B4-202ENST00000457312 FABP2P12104 132 aa6.23□□□□□ -1.41
SF3B4-202ENST00000457312 Q6ZVQ6 151 aa6.22□□□□□ -1.41
SF3B4-202ENST00000457312 A0A1B0GV72 72 aa6.21□□□□□ -1.42
SF3B4-202ENST00000457312 CCKP06307 115 aa6.21□□□□□ -1.42
SF3B4-202ENST00000457312 KRTAP19-3Q7Z4W3 81 aa6.21□□□□□ -1.42
SF3B4-202ENST00000457312 J3KT08 172 aa6.2□□□□□ -1.42
SF3B4-202ENST00000457312 SYS1-DBNDD2H3BUS1 97 aa6.19□□□□□ -1.42
SF3B4-202ENST00000457312 A8MUN3 132 aa6.18□□□□□ -1.42
SF3B4-202ENST00000457312 UQCC3Q6UW78 93 aa6.18□□□□□ -1.42
SF3B4-202ENST00000457312 NDUFB1O75438 58 aa6.17□□□□□ -1.42
SF3B4-202ENST00000457312 LINC01545Q5VT33 79 aa6.17□□□□□ -1.42
SF3B4-202ENST00000457312 KRTAP3-3Q9BYR6 98 aa6.17□□□□□ -1.42
SF3B4-202ENST00000457312 CYSTM1Q9H1C7 97 aa6.17□□□□□ -1.42
SF3B4-202ENST00000457312 K7EQZ3 153 aa6.13□□□□□ -1.43
SF3B4-202ENST00000457312 SNCGO76070 127 aa6.13□□□□□ -1.43
SF3B4-202ENST00000457312 MUC5ACP98088 5654 aa6.12□□□□□ -1.43
SF3B4-202ENST00000457312 PDE6GP18545 87 aa6.11□□□□□ -1.43
SF3B4-202ENST00000457312 YPEL4Q96NS1 127 aa6.11□□□□□ -1.43
SF3B4-202ENST00000457312 Q5W150 140 aa6.1□□□□□ -1.43
SF3B4-202ENST00000457312 MRPL34Q9BQ48 92 aaKnown RBP6.09□□□□□ -1.43
SF3B4-202ENST00000457312 TMEM254Q8TBM7 123 aa6.07□□□□□ -1.44
SF3B4-202ENST00000457312 CLLU1Q5K131 121 aa6.05□□□□□ -1.44
SF3B4-202ENST00000457312 VPS25Q9BRG1 176 aa6.05□□□□□ -1.44
SF3B4-202ENST00000457312 H0YGX0 51 aa6.04□□□□□ -1.44
SF3B4-202ENST00000457312 NDUFS5O43920 106 aa6.04□□□□□ -1.44
SF3B4-202ENST00000457312 MT1EP04732 61 aa6.04□□□□□ -1.44
SF3B4-202ENST00000457312 KRTAP19-7Q3SYF9 63 aa6.04□□□□□ -1.44
SF3B4-202ENST00000457312 PET117Q6UWS5 81 aa6.04□□□□□ -1.44
SF3B4-202ENST00000457312 C1orf64Q8NEQ6 169 aa6.04□□□□□ -1.44
SF3B4-202ENST00000457312 MUC5BQ9HC84 5762 aaPredicted RBP6.04□□□□□ -1.44
SF3B4-202ENST00000457312 MMP24-AS1A0A0U1RRL7 71 aa6.03□□□□□ -1.44
SF3B4-202ENST00000457312 H0YAA0 97 aa6.01□□□□□ -1.45
SF3B4-202ENST00000457312 A0A1B0GX51 115 aa5.99□□□□□ -1.45
SF3B4-202ENST00000457312 KRTAP20-2Q3LI61 65 aa5.98□□□□□ -1.45
SF3B4-202ENST00000457312 Q6ZQT0 140 aa5.94□□□□□ -1.46
SF3B4-202ENST00000457312 hDV103S1A0JD37 113 aa5.92□□□□□ -1.46
SF3B4-202ENST00000457312 ORMDL1Q9P0S3 153 aa5.91□□□□□ -1.46
SF3B4-202ENST00000457312 ATOH7Q8N100 152 aa5.9□□□□□ -1.46
SF3B4-202ENST00000457312 MT1GP13640 62 aa5.89□□□□□ -1.47
SF3B4-202ENST00000457312 A0A087WVE0 104 aa5.88□□□□□ -1.47
SF3B4-202ENST00000457312 C21orf62-AS1Q17RA5 79 aa5.88□□□□□ -1.47
SF3B4-202ENST00000457312 APOC3P02656 99 aa5.86□□□□□ -1.47
SF3B4-202ENST00000457312 H3BQ85 93 aa5.85□□□□□ -1.47
SF3B4-202ENST00000457312 TMEM256-PLSCR3K7ERE1 68 aa5.85□□□□□ -1.47
SF3B4-202ENST00000457312 SNAPINO95295 136 aa5.85□□□□□ -1.47
SF3B4-202ENST00000457312 ADM2Q7Z4H4 148 aa5.85□□□□□ -1.47
SF3B4-202ENST00000457312 PP632Q6XCG6 107 aa5.83□□□□□ -1.48
SF3B4-202ENST00000457312 MT1MQ8N339 61 aa5.83□□□□□ -1.48
SF3B4-202ENST00000457312 DNAL4O96015 105 aa5.82□□□□□ -1.48
SF3B4-202ENST00000457312 KRTDAPP60985 99 aa5.81□□□□□ -1.48
SF3B4-202ENST00000457312 UBE2V1Q13404 147 aa5.8□□□□□ -1.48
SF3B4-202ENST00000457312 SVBPQ8N300 66 aa5.8□□□□□ -1.48
SF3B4-202ENST00000457312 R4GN34 69 aa5.78□□□□□ -1.48
SF3B4-202ENST00000457312 HIST1H4GQ99525 98 aa5.77□□□□□ -1.49
SF3B4-202ENST00000457312 KRTAP4-3Q9BYR4 195 aa5.76□□□□□ -1.49
SF3B4-202ENST00000457312 A0A0B4J2C4 111 aa5.75□□□□□ -1.49
SF3B4-202ENST00000457312 TRIAP1O43715 76 aa5.74□□□□□ -1.49
SF3B4-202ENST00000457312 KRTAP4-7Q9BYR0 210 aa5.74□□□□□ -1.49
SF3B4-202ENST00000457312 HCG22E2RYF7 251 aa5.73□□□□□ -1.49
SF3B4-202ENST00000457312 KRTAP4-11Q9BYQ6 195 aa5.73□□□□□ -1.49
SF3B4-202ENST00000457312 C9JAW5 83 aa5.71□□□□□ -1.5
SF3B4-202ENST00000457312 M0QZ58 72 aa5.7□□□□□ -1.5
SF3B4-202ENST00000457312 NDUFA5Q16718 116 aa5.7□□□□□ -1.5
SF3B4-202ENST00000457312 LINC01554Q52M75 96 aa5.69□□□□□ -1.5
SF3B4-202ENST00000457312 KRTAP5-8O75690 187 aa5.68□□□□□ -1.5
SF3B4-202ENST00000457312 SNRPEP62304 92 aaKnown RBP5.68□□□□□ -1.5
SF3B4-202ENST00000457312 CXCL6P80162 114 aa5.67□□□□□ -1.5
SF3B4-202ENST00000457312 NDUFC1O43677 76 aa5.63□□□□□ -1.51
SF3B4-202ENST00000457312 HIST1H2BKO60814 126 aa5.63□□□□□ -1.51
SF3B4-202ENST00000457312 HIST1H2BJP06899 126 aa5.63□□□□□ -1.51
SF3B4-202ENST00000457312 HIST1H2BOP23527 126 aa5.63□□□□□ -1.51
SF3B4-202ENST00000457312 HIST1H2BBP33778 126 aa5.63□□□□□ -1.51
SF3B4-202ENST00000457312 HIST1H2BDP58876 126 aa5.63□□□□□ -1.51
SF3B4-202ENST00000457312 HIST1H2BCP62807 126 aa5.63□□□□□ -1.51
SF3B4-202ENST00000457312 HIST2H2BEQ16778 126 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms