RNA–Protein interactions for RNA: ENST00000457138.6

DDX3X-203, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 2 BASIC

Gene DDX3X, Length 5,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-203ENST00000457138 REV3LO60673 3130 aa6.23□□□□□ -1.41
DDX3X-203ENST00000457138 A8MU10 97 aa6.22□□□□□ -1.41
DDX3X-203ENST00000457138 ITPR2Q14571 2701 aa6.22□□□□□ -1.41
DDX3X-203ENST00000457138 KRTAP11-1Q8IUC1 163 aa6.2□□□□□ -1.42
DDX3X-203ENST00000457138 LRBAP50851 2863 aa6.19□□□□□ -1.42
DDX3X-203ENST00000457138 SPEGQ15772 3267 aa6.19□□□□□ -1.42
DDX3X-203ENST00000457138 NOTCH2NLQ7Z3S9 236 aa6.18□□□□□ -1.42
DDX3X-203ENST00000457138 ASH1LQ9NR48 2969 aaKnown RBP6.18□□□□□ -1.42
DDX3X-203ENST00000457138 KRTAP13-1Q8IUC0 172 aa6.17□□□□□ -1.42
DDX3X-203ENST00000457138 KRTAP7-1Q8IUC3 87 aa6.16□□□□□ -1.42
DDX3X-203ENST00000457138 KRTAP13-2Q52LG2 175 aa6.16□□□□□ -1.42
DDX3X-203ENST00000457138 ZZEF1O43149 2961 aa6.15□□□□□ -1.42
DDX3X-203ENST00000457138 UTP20O75691 2785 aaKnown RBP6.15□□□□□ -1.43
DDX3X-203ENST00000457138 NDUFAF8A1L188 74 aa6.15□□□□□ -1.43
DDX3X-203ENST00000457138 CFAP47Q6ZTR5 3102 aa6.13□□□□□ -1.43
DDX3X-203ENST00000457138 KMT2BQ9UMN6 2715 aaPredicted RBP6.09□□□□□ -1.43
DDX3X-203ENST00000457138 HIVEP1P15822 2718 aa6.09□□□□□ -1.43
DDX3X-203ENST00000457138 MYO15AQ9UKN7 3530 aa6.08□□□□□ -1.44
DDX3X-203ENST00000457138 A8MUU9 505 aa6.07□□□□□ -1.44
DDX3X-203ENST00000457138 CELSR2Q9HCU4 2923 aa6.07□□□□□ -1.44
DDX3X-203ENST00000457138 NIPBLQ6KC79 2804 aaeCLIP6.05□□□□□ -1.44
DDX3X-203ENST00000457138 ZANQ9Y493 2812 aa6.04□□□□□ -1.44
DDX3X-203ENST00000457138 C20orf166-AS1Q96NR2 134 aa6.04□□□□□ -1.44
DDX3X-203ENST00000457138 APCP25054 2843 aa6.03□□□□□ -1.44
DDX3X-203ENST00000457138 MUC3AQ02505 3323 aa6.01□□□□□ -1.45
DDX3X-203ENST00000457138 DMXL1Q9Y485 3027 aa6.01□□□□□ -1.45
DDX3X-203ENST00000457138 TENM4Q6N022 2769 aa6.01□□□□□ -1.45
DDX3X-203ENST00000457138 CRYBG3Q68DQ2 2970 aa5.99□□□□□ -1.45
DDX3X-203ENST00000457138 DCHS2Q6V1P9 2916 aa5.99□□□□□ -1.45
DDX3X-203ENST00000457138 USP34Q70CQ2 3546 aa5.98□□□□□ -1.45
DDX3X-203ENST00000457138 LOC400499M0QZD8 3231 aa5.97□□□□□ -1.45
DDX3X-203ENST00000457138 NF1P21359 2839 aa5.89□□□□□ -1.47
DDX3X-203ENST00000457138 KRTAP1-4P0C5Y4 121 aa5.88□□□□□ -1.47
DDX3X-203ENST00000457138 FBN2P35556 2912 aa5.88□□□□□ -1.47
DDX3X-203ENST00000457138 HRNRQ86YZ3 2850 aaPredicted RBP5.88□□□□□ -1.47
DDX3X-203ENST00000457138 TNP1P09430 55 aa5.87□□□□□ -1.47
DDX3X-203ENST00000457138 XP32Q5T750 250 aa5.86□□□□□ -1.47
DDX3X-203ENST00000457138 C10orf95Q9H7T3 257 aa5.83□□□□□ -1.48
DDX3X-203ENST00000457138 TPRXLQ17RH7 258 aa5.83□□□□□ -1.48
DDX3X-203ENST00000457138 DMDP11532 3685 aa5.82□□□□□ -1.48
DDX3X-203ENST00000457138 ASPMQ8IZT6 3477 aa5.79□□□□□ -1.48
DDX3X-203ENST00000457138 LAMA5O15230 3695 aa5.75□□□□□ -1.49
DDX3X-203ENST00000457138 H0YAA0 97 aa5.75□□□□□ -1.49
DDX3X-203ENST00000457138 TENM3Q9P273 2699 aa5.73□□□□□ -1.49
DDX3X-203ENST00000457138 DCHS1Q96JQ0 3298 aa5.73□□□□□ -1.49
DDX3X-203ENST00000457138 WDFY3Q8IZQ1 3526 aa5.72□□□□□ -1.49
DDX3X-203ENST00000457138 PP632Q6XCG6 107 aa5.72□□□□□ -1.49
DDX3X-203ENST00000457138 RELNP78509 3460 aa5.71□□□□□ -1.49
DDX3X-203ENST00000457138 P0C880 135 aa5.71□□□□□ -1.5
DDX3X-203ENST00000457138 MXRA5Q9NR99 2828 aa5.7□□□□□ -1.5
DDX3X-203ENST00000457138 KRTAP10-8P60410 259 aa5.69□□□□□ -1.5
DDX3X-203ENST00000457138 KRTAP13-3Q3SY46 172 aa5.68□□□□□ -1.5
DDX3X-203ENST00000457138 A0A1B0GVY2 172 aa5.67□□□□□ -1.5
DDX3X-203ENST00000457138 CELSR1Q9NYQ6 3014 aa5.66□□□□□ -1.5
DDX3X-203ENST00000457138 TENM1Q9UKZ4 2725 aa5.66□□□□□ -1.5
DDX3X-203ENST00000457138 KRTAP10-10P60014 251 aa5.63□□□□□ -1.51
DDX3X-203ENST00000457138 PRO2289Q9P1D8 64 aa5.62□□□□□ -1.51
DDX3X-203ENST00000457138 PKD1L1Q8TDX9 2849 aa5.58□□□□□ -1.52
DDX3X-203ENST00000457138 TENM2Q9NT68 2774 aa5.57□□□□□ -1.52
DDX3X-203ENST00000457138 ZFHX4Q86UP3 3567 aa5.55□□□□□ -1.52
DDX3X-203ENST00000457138 SMG1Q96Q15 3661 aaKnown RBP5.51□□□□□ -1.53
DDX3X-203ENST00000457138 PDZD2O15018 2839 aa5.48□□□□□ -1.53
DDX3X-203ENST00000457138 VWFP04275 2813 aa5.47□□□□□ -1.53
DDX3X-203ENST00000457138 TGP01266 2768 aa5.45□□□□□ -1.54
DDX3X-203ENST00000457138 FBN1P35555 2871 aaKnown RBP5.45□□□□□ -1.54
DDX3X-203ENST00000457138 CSMD1Q96PZ7 3565 aa5.41□□□□□ -1.54
DDX3X-203ENST00000457138 NBPF19A0A087WUL8 3843 aa5.35□□□□□ -1.55
DDX3X-203ENST00000457138 KRTAP12-2P59991 146 aa5.35□□□□□ -1.55
DDX3X-203ENST00000457138 OTOGQ6ZRI0 2925 aa5.34□□□□□ -1.55
DDX3X-203ENST00000457138 ZFHX3Q15911 3703 aa5.32□□□□□ -1.56
DDX3X-203ENST00000457138 SRRM2Q9UQ35 2752 aaKnown RBP5.29□□□□□ -1.56
DDX3X-203ENST00000457138 SVEP1Q4LDE5 3571 aa5.27□□□□□ -1.57
DDX3X-203ENST00000457138 CUBNO60494 3623 aa5.26□□□□□ -1.57
DDX3X-203ENST00000457138 SPENQ96T58 3664 aaKnown RBP5.25□□□□□ -1.57
DDX3X-203ENST00000457138 KRTAP13-4Q3LI77 160 aa5.24□□□□□ -1.57
DDX3X-203ENST00000457138 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
DDX3X-203ENST00000457138 CSMD2Q7Z408 3487 aa5.22□□□□□ -1.57
DDX3X-203ENST00000457138 FBN3Q75N90 2809 aa5.17□□□□□ -1.58
DDX3X-203ENST00000457138 KRTAP3-1Q9BYR8 98 aa5.16□□□□□ -1.58
DDX3X-203ENST00000457138 BSNQ9UPA5 3926 aa5.14□□□□□ -1.59
DDX3X-203ENST00000457138 KRTAP23-1A1A580 65 aa5.12□□□□□ -1.59
DDX3X-203ENST00000457138 ANK3Q12955 4377 aaKnown RBP5.1□□□□□ -1.59
DDX3X-203ENST00000457138 MT1HL1P0DM35 61 aa5.09□□□□□ -1.6
DDX3X-203ENST00000457138 TRRAPQ9Y4A5 3859 aa5.08□□□□□ -1.6
DDX3X-203ENST00000457138 MEGF8Q7Z7M0 2845 aa5.06□□□□□ -1.6
DDX3X-203ENST00000457138 COL7A1Q02388 2944 aa5.06□□□□□ -1.6
DDX3X-203ENST00000457138 KRTAP10-6P60371 365 aaPredicted RBP5.05□□□□□ -1.6
DDX3X-203ENST00000457138 KRTAP15-1Q3LI76 137 aa5.05□□□□□ -1.6
DDX3X-203ENST00000457138 KRTAP3-3Q9BYR6 98 aa4.98□□□□□ -1.61
DDX3X-203ENST00000457138 KRTAP3-2Q9BYR7 98 aa4.98□□□□□ -1.61
DDX3X-203ENST00000457138 INE1O15225 51 aa4.96□□□□□ -1.62
DDX3X-203ENST00000457138 KRTAP10-4P60372 401 aaPredicted RBP4.93□□□□□ -1.62
DDX3X-203ENST00000457138 VPS13CQ709C8 3753 aa4.91□□□□□ -1.62
DDX3X-203ENST00000457138 KRTAP4-5Q9BYR2 181 aa4.87□□□□□ -1.63
DDX3X-203ENST00000457138 KRTAP10-12P60413 245 aa4.85□□□□□ -1.63
DDX3X-203ENST00000457138 ZNF469Q96JG9 3925 aaPredicted RBP4.83□□□□□ -1.64
DDX3X-203ENST00000457138 HUWE1Q7Z6Z7 4374 aaKnown RBP4.81□□□□□ -1.64
DDX3X-203ENST00000457138 ALMS1Q8TCU4 4167 aa4.77□□□□□ -1.65
DDX3X-203ENST00000457138 KRTAP12-3P60328 96 aa4.69□□□□□ -1.66
DDX3X-203ENST00000457138 AKAP9Q99996 3911 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms