RNA–Protein interactions for RNA: ENST00000450894.7

ITGB4-203, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,645 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-203ENST00000450894 EYSQ5T1H1 3165 aa7.59□□□□□ -1.2
ITGB4-203ENST00000450894 TACC2O95359 2948 aa7.58□□□□□ -1.2
ITGB4-203ENST00000450894 KRTAP21-3Q3LHN1 58 aa7.58□□□□□ -1.2
ITGB4-203ENST00000450894 MYO15AQ9UKN7 3530 aa7.57□□□□□ -1.2
ITGB4-203ENST00000450894 REV3LO60673 3130 aa7.56□□□□□ -1.2
ITGB4-203ENST00000450894 TEP1Q99973 2627 aaKnown RBP7.56□□□□□ -1.2
ITGB4-203ENST00000450894 NOTCH1P46531 2555 aa7.55□□□□□ -1.2
ITGB4-203ENST00000450894 SPTBN5Q9NRC6 3674 aaKnown RBP7.54□□□□□ -1.2
ITGB4-203ENST00000450894 COL12A1Q99715 3063 aa7.53□□□□□ -1.2
ITGB4-203ENST00000450894 ASH1LQ9NR48 2969 aaKnown RBP7.53□□□□□ -1.2
ITGB4-203ENST00000450894 UBR5O95071 2799 aaPredicted RBP7.52□□□□□ -1.21
ITGB4-203ENST00000450894 ITPR1Q14643 2758 aa7.5□□□□□ -1.21
ITGB4-203ENST00000450894 SETXQ7Z333 2677 aaKnown RBP7.49□□□□□ -1.21
ITGB4-203ENST00000450894 ZZEF1O43149 2961 aa7.47□□□□□ -1.21
ITGB4-203ENST00000450894 USP34Q70CQ2 3546 aa7.46□□□□□ -1.21
ITGB4-203ENST00000450894 KRTAP13-3Q3SY46 172 aa7.46□□□□□ -1.21
ITGB4-203ENST00000450894 IGSF10Q6WRI0 2623 aa7.46□□□□□ -1.22
ITGB4-203ENST00000450894 FLNCQ14315 2725 aa7.45□□□□□ -1.22
ITGB4-203ENST00000450894 COL6A5A8TX70 2615 aa7.45□□□□□ -1.22
ITGB4-203ENST00000450894 LOC400499M0QZD8 3231 aa7.43□□□□□ -1.22
ITGB4-203ENST00000450894 KRTAP1-4P0C5Y4 121 aa7.42□□□□□ -1.22
ITGB4-203ENST00000450894 KRTAP10-8P60410 259 aa7.39□□□□□ -1.23
ITGB4-203ENST00000450894 BAHCC1Q9P281 2608 aa7.39□□□□□ -1.23
ITGB4-203ENST00000450894 WDFY3Q8IZQ1 3526 aa7.31□□□□□ -1.24
ITGB4-203ENST00000450894 UTP20O75691 2785 aaKnown RBP7.3□□□□□ -1.24
ITGB4-203ENST00000450894 DMXL1Q9Y485 3027 aa7.29□□□□□ -1.24
ITGB4-203ENST00000450894 STAB2Q8WWQ8 2551 aa7.29□□□□□ -1.24
ITGB4-203ENST00000450894 KMT2BQ9UMN6 2715 aaPredicted RBP7.28□□□□□ -1.24
ITGB4-203ENST00000450894 NSD1Q96L73 2696 aaPredicted RBP7.28□□□□□ -1.24
ITGB4-203ENST00000450894 ZANQ9Y493 2812 aa7.28□□□□□ -1.24
ITGB4-203ENST00000450894 XP32Q5T750 250 aa7.27□□□□□ -1.25
ITGB4-203ENST00000450894 CELSR2Q9HCU4 2923 aa7.25□□□□□ -1.25
ITGB4-203ENST00000450894 HIVEP1P15822 2718 aa7.24□□□□□ -1.25
ITGB4-203ENST00000450894 DCHS1Q96JQ0 3298 aa7.22□□□□□ -1.25
ITGB4-203ENST00000450894 APCP25054 2843 aa7.21□□□□□ -1.26
ITGB4-203ENST00000450894 ITPR2Q14571 2701 aa7.19□□□□□ -1.26
ITGB4-203ENST00000450894 TNRC18O15417 2968 aaPredicted RBP7.19□□□□□ -1.26
ITGB4-203ENST00000450894 HRNRQ86YZ3 2850 aaPredicted RBP7.16□□□□□ -1.26
ITGB4-203ENST00000450894 FBN2P35556 2912 aa7.14□□□□□ -1.27
ITGB4-203ENST00000450894 TPRXLQ17RH7 258 aa7.12□□□□□ -1.27
ITGB4-203ENST00000450894 DCHS2Q6V1P9 2916 aa7.12□□□□□ -1.27
ITGB4-203ENST00000450894 ZFHX4Q86UP3 3567 aa7.12□□□□□ -1.27
ITGB4-203ENST00000450894 ASPMQ8IZT6 3477 aa7.12□□□□□ -1.27
ITGB4-203ENST00000450894 NF1P21359 2839 aa7.11□□□□□ -1.27
ITGB4-203ENST00000450894 KRTAP12-2P59991 146 aa7.09□□□□□ -1.27
ITGB4-203ENST00000450894 RELNP78509 3460 aa7.09□□□□□ -1.27
ITGB4-203ENST00000450894 NIPBLQ6KC79 2804 aaeCLIP7.08□□□□□ -1.28
ITGB4-203ENST00000450894 A0A1B0GVY2 172 aa7.08□□□□□ -1.28
ITGB4-203ENST00000450894 CRYBG3Q68DQ2 2970 aa7.05□□□□□ -1.28
ITGB4-203ENST00000450894 KRTAP13-4Q3LI77 160 aa7□□□□□ -1.29
ITGB4-203ENST00000450894 LAMA5O15230 3695 aa6.99□□□□□ -1.29
ITGB4-203ENST00000450894 KRTAP12-1P59990 96 aa6.98□□□□□ -1.29
ITGB4-203ENST00000450894 PRO2289Q9P1D8 64 aa6.98□□□□□ -1.29
ITGB4-203ENST00000450894 CSMD1Q96PZ7 3565 aa6.96□□□□□ -1.3
ITGB4-203ENST00000450894 MXRA5Q9NR99 2828 aa6.92□□□□□ -1.3
ITGB4-203ENST00000450894 KRTAP10-10P60014 251 aa6.91□□□□□ -1.3
ITGB4-203ENST00000450894 DMDP11532 3685 aa6.9□□□□□ -1.3
ITGB4-203ENST00000450894 KRTAP3-1Q9BYR8 98 aa6.9□□□□□ -1.31
ITGB4-203ENST00000450894 SMG1Q96Q15 3661 aaKnown RBP6.88□□□□□ -1.31
ITGB4-203ENST00000450894 MUC3AQ02505 3323 aa6.86□□□□□ -1.31
ITGB4-203ENST00000450894 KRTAP15-1Q3LI76 137 aa6.85□□□□□ -1.31
ITGB4-203ENST00000450894 CELSR1Q9NYQ6 3014 aa6.84□□□□□ -1.31
ITGB4-203ENST00000450894 KRTAP10-6P60371 365 aaPredicted RBP6.8□□□□□ -1.32
ITGB4-203ENST00000450894 TENM4Q6N022 2769 aa6.79□□□□□ -1.32
ITGB4-203ENST00000450894 SVEP1Q4LDE5 3571 aa6.77□□□□□ -1.33
ITGB4-203ENST00000450894 CUBNO60494 3623 aa6.75□□□□□ -1.33
ITGB4-203ENST00000450894 INE1O15225 51 aa6.74□□□□□ -1.33
ITGB4-203ENST00000450894 TENM3Q9P273 2699 aa6.71□□□□□ -1.34
ITGB4-203ENST00000450894 TGP01266 2768 aa6.68□□□□□ -1.34
ITGB4-203ENST00000450894 PDZD2O15018 2839 aa6.6□□□□□ -1.35
ITGB4-203ENST00000450894 TENM1Q9UKZ4 2725 aa6.57□□□□□ -1.36
ITGB4-203ENST00000450894 KRTAP3-2Q9BYR7 98 aa6.56□□□□□ -1.36
ITGB4-203ENST00000450894 SPENQ96T58 3664 aaKnown RBP6.55□□□□□ -1.36
ITGB4-203ENST00000450894 VWFP04275 2813 aa6.53□□□□□ -1.36
ITGB4-203ENST00000450894 FBN1P35555 2871 aaKnown RBP6.52□□□□□ -1.37
ITGB4-203ENST00000450894 KRTAP23-1A1A580 65 aa6.5□□□□□ -1.37
ITGB4-203ENST00000450894 PKD1L1Q8TDX9 2849 aa6.49□□□□□ -1.37
ITGB4-203ENST00000450894 KRTAP3-3Q9BYR6 98 aa6.48□□□□□ -1.37
ITGB4-203ENST00000450894 NBPF19A0A087WUL8 3843 aa6.43□□□□□ -1.38
ITGB4-203ENST00000450894 TENM2Q9NT68 2774 aa6.43□□□□□ -1.38
ITGB4-203ENST00000450894 CSMD2Q7Z408 3487 aa6.42□□□□□ -1.38
ITGB4-203ENST00000450894 ANK3Q12955 4377 aaKnown RBP6.37□□□□□ -1.39
ITGB4-203ENST00000450894 OTOGQ6ZRI0 2925 aa6.33□□□□□ -1.4
ITGB4-203ENST00000450894 ZFHX3Q15911 3703 aa6.32□□□□□ -1.4
ITGB4-203ENST00000450894 BSNQ9UPA5 3926 aa6.25□□□□□ -1.41
ITGB4-203ENST00000450894 SRRM2Q9UQ35 2752 aaKnown RBP6.22□□□□□ -1.41
ITGB4-203ENST00000450894 KRTAP10-12P60413 245 aa6.21□□□□□ -1.42
ITGB4-203ENST00000450894 FBN3Q75N90 2809 aa6.2□□□□□ -1.42
ITGB4-203ENST00000450894 TRRAPQ9Y4A5 3859 aa6.19□□□□□ -1.42
ITGB4-203ENST00000450894 MT1HL1P0DM35 61 aa6.11□□□□□ -1.43
ITGB4-203ENST00000450894 KRTAP12-3P60328 96 aa6.1□□□□□ -1.43
ITGB4-203ENST00000450894 HUWE1Q7Z6Z7 4374 aaKnown RBP6.1□□□□□ -1.43
ITGB4-203ENST00000450894 KRTAP10-4P60372 401 aaPredicted RBP6.09□□□□□ -1.43
ITGB4-203ENST00000450894 VPS13CQ709C8 3753 aa6.09□□□□□ -1.43
ITGB4-203ENST00000450894 MEGF8Q7Z7M0 2845 aa6.07□□□□□ -1.44
ITGB4-203ENST00000450894 LCE3AQ5TA76 89 aa6.04□□□□□ -1.44
ITGB4-203ENST00000450894 CRCT1Q9UGL9 99 aa6.01□□□□□ -1.45
ITGB4-203ENST00000450894 COL7A1Q02388 2944 aa5.99□□□□□ -1.45
ITGB4-203ENST00000450894 ALMS1Q8TCU4 4167 aa5.91□□□□□ -1.46
ITGB4-203ENST00000450894 CSMD3Q7Z407 3707 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms