RNA–Protein interactions for RNA: ENST00000450338.5

SEMA3F-207, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 1,693 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-207ENST00000450338 NDUFB1O75438 58 aa12.57□□□□□ -0.4
SEMA3F-207ENST00000450338 PRR15Q8IV56 129 aa12.55□□□□□ -0.4
SEMA3F-207ENST00000450338 A0A087WVE0 104 aa12.53□□□□□ -0.4
SEMA3F-207ENST00000450338 A0A1B0GVX0 72 aa12.51□□□□□ -0.41
SEMA3F-207ENST00000450338 J3QL48 77 aa12.51□□□□□ -0.41
SEMA3F-207ENST00000450338 RETNLBQ9BQ08 111 aa12.51□□□□□ -0.41
SEMA3F-207ENST00000450338 IGHV6-1A0A0B4J1U7 121 aa12.49□□□□□ -0.41
SEMA3F-207ENST00000450338 C8orf17Q9NRJ1 99 aa12.42□□□□□ -0.42
SEMA3F-207ENST00000450338 HCG22E2RYF7 251 aa12.42□□□□□ -0.42
SEMA3F-207ENST00000450338 MMP24-AS1A0A0U1RRL7 71 aa12.4□□□□□ -0.42
SEMA3F-207ENST00000450338 FAM236AA0A1B0GUQ0 79 aa12.4□□□□□ -0.42
SEMA3F-207ENST00000450338 FAM236BA0A1B0GV22 79 aa12.4□□□□□ -0.42
SEMA3F-207ENST00000450338 C8orf87E5RJ46 101 aa12.4□□□□□ -0.42
SEMA3F-207ENST00000450338 FP248Q71RG6 208 aaPredicted RBP12.39□□□□□ -0.43
SEMA3F-207ENST00000450338 NOTCH2NLQ7Z3S9 236 aa12.39□□□□□ -0.43
SEMA3F-207ENST00000450338 LINC00313P59037 77 aa12.38□□□□□ -0.43
SEMA3F-207ENST00000450338 WFDC13Q8IUB5 93 aa12.38□□□□□ -0.43
SEMA3F-207ENST00000450338 CASC2Q6XLA1 102 aa12.36□□□□□ -0.43
SEMA3F-207ENST00000450338 hDV103S1A0JD37 113 aa12.35□□□□□ -0.43
SEMA3F-207ENST00000450338 SCGB1A1P11684 91 aa12.34□□□□□ -0.43
SEMA3F-207ENST00000450338 IGLV7-46A0A075B6I9 117 aa12.31□□□□□ -0.44
SEMA3F-207ENST00000450338 PRR4Q16378 134 aa12.29□□□□□ -0.44
SEMA3F-207ENST00000450338 TMEM254Q8TBM7 123 aa12.29□□□□□ -0.44
SEMA3F-207ENST00000450338 HERC1Q15751 4861 aa12.28□□□□□ -0.44
SEMA3F-207ENST00000450338 C9orf92A6NGG3 77 aa12.26□□□□□ -0.45
SEMA3F-207ENST00000450338 MRPL34Q9BQ48 92 aaKnown RBP12.26□□□□□ -0.45
SEMA3F-207ENST00000450338 ATOX1O00244 68 aa12.25□□□□□ -0.45
SEMA3F-207ENST00000450338 KRTAP16-1A8MUX0 517 aa12.24□□□□□ -0.45
SEMA3F-207ENST00000450338 KRTAP13-3Q3SY46 172 aa12.18□□□□□ -0.46
SEMA3F-207ENST00000450338 NDUFS5O43920 106 aa12.17□□□□□ -0.46
SEMA3F-207ENST00000450338 Q8N9P0 234 aaPredicted RBP12.16□□□□□ -0.46
SEMA3F-207ENST00000450338 SMIM20Q8N5G0 67 aa12.16□□□□□ -0.46
SEMA3F-207ENST00000450338 OCR1Q9BZK8 76 aa12.16□□□□□ -0.46
SEMA3F-207ENST00000450338 TPRXLQ17RH7 258 aa12.12□□□□□ -0.47
SEMA3F-207ENST00000450338 ANAPC13Q9BS18 74 aa12.12□□□□□ -0.47
SEMA3F-207ENST00000450338 TRAV7A0A075B6U4 112 aa12.11□□□□□ -0.47
SEMA3F-207ENST00000450338 TP53AIP1Q9HCN2 124 aa12.1□□□□□ -0.47
SEMA3F-207ENST00000450338 C20orf166-AS1Q96NR2 134 aa12.09□□□□□ -0.47
SEMA3F-207ENST00000450338 SERP2Q8N6R1 65 aa12.08□□□□□ -0.48
SEMA3F-207ENST00000450338 A8MUU9 505 aa12.07□□□□□ -0.48
SEMA3F-207ENST00000450338 UQCRQO14949 82 aa12.06□□□□□ -0.48
SEMA3F-207ENST00000450338 XP32Q5T750 250 aa12.04□□□□□ -0.48
SEMA3F-207ENST00000450338 Q75L30 129 aa12.02□□□□□ -0.49
SEMA3F-207ENST00000450338 COX7CP15954 63 aa11.99□□□□□ -0.49
SEMA3F-207ENST00000450338 C5orf47Q569G3 176 aa11.97□□□□□ -0.49
SEMA3F-207ENST00000450338 TRAV22A0A0B4J277 110 aa11.97□□□□□ -0.49
SEMA3F-207ENST00000450338 Q5W150 140 aa11.96□□□□□ -0.5
SEMA3F-207ENST00000450338 RPL37P61927 97 aaKnown RBP11.95□□□□□ -0.5
SEMA3F-207ENST00000450338 H0Y9P7 68 aa11.94□□□□□ -0.5
SEMA3F-207ENST00000450338 ZCCHC13Q8WW36 166 aaKnown RBP11.94□□□□□ -0.5
SEMA3F-207ENST00000450338 HMCN2Q8NDA2 5059 aa11.93□□□□□ -0.5
SEMA3F-207ENST00000450338 PCP4P48539 62 aa11.91□□□□□ -0.5
SEMA3F-207ENST00000450338 MP68P56378 58 aa11.91□□□□□ -0.5
SEMA3F-207ENST00000450338 LPAP08519 4548 aa11.91□□□□□ -0.5
SEMA3F-207ENST00000450338 ATP11AUNQ6ZP68 121 aa11.87□□□□□ -0.51
SEMA3F-207ENST00000450338 C20orf197Q8N268 126 aa11.87□□□□□ -0.51
SEMA3F-207ENST00000450338 LINC00208Q96KT6 92 aa11.85□□□□□ -0.51
SEMA3F-207ENST00000450338 H3BPC8 53 aa11.84□□□□□ -0.51
SEMA3F-207ENST00000450338 CCDC179H3BU77 68 aa11.84□□□□□ -0.51
SEMA3F-207ENST00000450338 A0A0U1RQV1 116 aa11.82□□□□□ -0.52
SEMA3F-207ENST00000450338 C1orf64Q8NEQ6 169 aa11.81□□□□□ -0.52
SEMA3F-207ENST00000450338 SNURFQ9Y675 71 aa11.81□□□□□ -0.52
SEMA3F-207ENST00000450338 LRP2P98164 4655 aa11.8□□□□□ -0.52
SEMA3F-207ENST00000450338 KLKP1Q107X0 134 aa11.78□□□□□ -0.52
SEMA3F-207ENST00000450338 LOC101927531A0A1B0GV80 90 aa11.77□□□□□ -0.53
SEMA3F-207ENST00000450338 PCOTHQ58A44 107 aa11.75□□□□□ -0.53
SEMA3F-207ENST00000450338 IGKV2-30P06310 120 aa11.75□□□□□ -0.53
SEMA3F-207ENST00000450338 IGKV2D-30A0A075B6S6 120 aa11.72□□□□□ -0.53
SEMA3F-207ENST00000450338 SEC61BP60468 96 aaKnown RBP11.71□□□□□ -0.53
SEMA3F-207ENST00000450338 CYP4F30PQ9H0H9 118 aa11.71□□□□□ -0.54
SEMA3F-207ENST00000450338 C7orf65Q6ZTY9 151 aa11.69□□□□□ -0.54
SEMA3F-207ENST00000450338 CYSTM1Q9H1C7 97 aa11.68□□□□□ -0.54
SEMA3F-207ENST00000450338 SPINK7P58062 85 aa11.65□□□□□ -0.55
SEMA3F-207ENST00000450338 NDUFC1O43677 76 aa11.62□□□□□ -0.55
SEMA3F-207ENST00000450338 H7BZZ5 65 aa11.58□□□□□ -0.56
SEMA3F-207ENST00000450338 MUC17Q685J3 4493 aa11.54□□□□□ -0.56
SEMA3F-207ENST00000450338 UBR4Q5T4S7 5183 aa11.53□□□□□ -0.56
SEMA3F-207ENST00000450338 HRES1P13985 223 aa11.51□□□□□ -0.57
SEMA3F-207ENST00000450338 SPANXA2-OT1Q8N9U9 137 aa11.45□□□□□ -0.58
SEMA3F-207ENST00000450338 KRTAP4-1Q9BYQ7 146 aa11.45□□□□□ -0.58
SEMA3F-207ENST00000450338 TMEM258P61165 79 aa11.43□□□□□ -0.58
SEMA3F-207ENST00000450338 C4orf26Q17RF5 130 aa11.43□□□□□ -0.58
SEMA3F-207ENST00000450338 FAM236DA0A1B0GTK5 79 aa11.35□□□□□ -0.59
SEMA3F-207ENST00000450338 FAM236CP0DP71 79 aa11.35□□□□□ -0.59
SEMA3F-207ENST00000450338 ATP5EP56381 51 aaPredicted RBP11.33□□□□□ -0.6
SEMA3F-207ENST00000450338 COX6B2Q6YFQ2 88 aa11.33□□□□□ -0.6
SEMA3F-207ENST00000450338 MPLKIPQ8TAP9 179 aa11.33□□□□□ -0.6
SEMA3F-207ENST00000450338 RBM12B-AS1Q9P1G2 102 aa11.3□□□□□ -0.6
SEMA3F-207ENST00000450338 DMAC1Q96GE9 116 aa11.29□□□□□ -0.6
SEMA3F-207ENST00000450338 RNF213Q63HN8 5207 aa11.27□□□□□ -0.6
SEMA3F-207ENST00000450338 KRTAP3-1Q9BYR8 98 aa11.27□□□□□ -0.61
SEMA3F-207ENST00000450338 A8MUN3 132 aa11.25□□□□□ -0.61
SEMA3F-207ENST00000450338 ACYP2P14621 99 aa11.21□□□□□ -0.61
SEMA3F-207ENST00000450338 MUC2Q02817 5179 aa11.19□□□□□ -0.62
SEMA3F-207ENST00000450338 H1FX-AS1Q4G0G2 97 aa11.12□□□□□ -0.63
SEMA3F-207ENST00000450338 KRTAP19-2Q3LHN2 52 aa11.1□□□□□ -0.63
SEMA3F-207ENST00000450338 COA5Q86WW8 74 aa11.1□□□□□ -0.63
SEMA3F-207ENST00000450338 SERP1Q9Y6X1 66 aa11.08□□□□□ -0.64
SEMA3F-207ENST00000450338 CHKB-CPT1BH3BT56 60 aa11.02□□□□□ -0.64
SEMA3F-207ENST00000450338 S4R3F8 94 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms