RNA–Protein interactions for RNA: ENST00000448637.5

LPP-208, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5 BASIC

Gene LPP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-208ENST00000448637 KRTAP1-4P0C5Y4 121 aa4.27□□□□□ -1.73
LPP-208ENST00000448637 TEX15Q9BXT5 2789 aa4.25□□□□□ -1.73
LPP-208ENST00000448637 LAMA1P25391 3075 aa4.25□□□□□ -1.73
LPP-208ENST00000448637 NOTCH1P46531 2555 aa4.24□□□□□ -1.73
LPP-208ENST00000448637 NBPF19A0A087WUL8 3843 aa4.23□□□□□ -1.73
LPP-208ENST00000448637 AKAP13Q12802 2813 aa4.23□□□□□ -1.73
LPP-208ENST00000448637 VPS13CQ709C8 3753 aa4.23□□□□□ -1.73
LPP-208ENST00000448637 TRIOO75962 3097 aa4.22□□□□□ -1.73
LPP-208ENST00000448637 KRTAP13-3Q3SY46 172 aa4.22□□□□□ -1.73
LPP-208ENST00000448637 CFAP47Q6ZTR5 3102 aa4.22□□□□□ -1.73
LPP-208ENST00000448637 AKAP9Q99996 3911 aa4.22□□□□□ -1.73
LPP-208ENST00000448637 COL6A5A8TX70 2615 aa4.21□□□□□ -1.74
LPP-208ENST00000448637 CHD6Q8TD26 2715 aa4.2□□□□□ -1.74
LPP-208ENST00000448637 DCHS1Q96JQ0 3298 aa4.19□□□□□ -1.74
LPP-208ENST00000448637 GCN1Q92616 2671 aaKnown RBP4.19□□□□□ -1.74
LPP-208ENST00000448637 KRTAP12-2P59991 146 aa4.17□□□□□ -1.74
LPP-208ENST00000448637 IGSF10Q6WRI0 2623 aa4.17□□□□□ -1.74
LPP-208ENST00000448637 PRRC2CQ9Y520 2896 aaKnown RBP4.17□□□□□ -1.74
LPP-208ENST00000448637 VPS13AQ96RL7 3174 aa4.16□□□□□ -1.74
LPP-208ENST00000448637 TRANK1O15050 2925 aa4.16□□□□□ -1.74
LPP-208ENST00000448637 KRTAP13-4Q3LI77 160 aa4.15□□□□□ -1.75
LPP-208ENST00000448637 BOD1L1Q8NFC6 3051 aa4.14□□□□□ -1.75
LPP-208ENST00000448637 LCE2DQ5TA82 110 aaPredicted RBP4.12□□□□□ -1.75
LPP-208ENST00000448637 LOC400499M0QZD8 3231 aa4.12□□□□□ -1.75
LPP-208ENST00000448637 NSD1Q96L73 2696 aaPredicted RBP4.12□□□□□ -1.75
LPP-208ENST00000448637 FRYLO94915 3013 aa4.11□□□□□ -1.75
LPP-208ENST00000448637 CSMD1Q96PZ7 3565 aa4.11□□□□□ -1.75
LPP-208ENST00000448637 KRTAP15-1Q3LI76 137 aa4.11□□□□□ -1.75
LPP-208ENST00000448637 MAP1AP78559 2803 aaPredicted RBP4.11□□□□□ -1.75
LPP-208ENST00000448637 WDFY4Q6ZS81 3184 aa4.1□□□□□ -1.75
LPP-208ENST00000448637 LAMA5O15230 3695 aa4.1□□□□□ -1.75
LPP-208ENST00000448637 CHD7Q9P2D1 2997 aa4.09□□□□□ -1.75
LPP-208ENST00000448637 KRTAP3-3Q9BYR6 98 aa4.08□□□□□ -1.76
LPP-208ENST00000448637 KRTAP3-2Q9BYR7 98 aa4.08□□□□□ -1.76
LPP-208ENST00000448637 SVEP1Q4LDE5 3571 aa4.07□□□□□ -1.76
LPP-208ENST00000448637 CHD9Q3L8U1 2897 aa4.04□□□□□ -1.76
LPP-208ENST00000448637 FRYQ5TBA9 3013 aa4.03□□□□□ -1.76
LPP-208ENST00000448637 CUBNO60494 3623 aa4.03□□□□□ -1.76
LPP-208ENST00000448637 ZNF292O60281 2723 aa4.03□□□□□ -1.76
LPP-208ENST00000448637 KMT2BQ9UMN6 2715 aaPredicted RBP4□□□□□ -1.77
LPP-208ENST00000448637 KRTAP12-1P59990 96 aa3.99□□□□□ -1.77
LPP-208ENST00000448637 INE1O15225 51 aa3.98□□□□□ -1.77
LPP-208ENST00000448637 NBEAL2Q6ZNJ1 2754 aa3.97□□□□□ -1.77
LPP-208ENST00000448637 ITPR2Q14571 2701 aa3.96□□□□□ -1.78
LPP-208ENST00000448637 CSMD2Q7Z408 3487 aa3.95□□□□□ -1.78
LPP-208ENST00000448637 UBR5O95071 2799 aaPredicted RBP3.92□□□□□ -1.78
LPP-208ENST00000448637 DMXL1Q9Y485 3027 aa3.91□□□□□ -1.78
LPP-208ENST00000448637 DMXL2Q8TDJ6 3036 aa3.89□□□□□ -1.79
LPP-208ENST00000448637 KALRNO60229 2985 aa3.88□□□□□ -1.79
LPP-208ENST00000448637 CRCT1Q9UGL9 99 aa3.88□□□□□ -1.79
LPP-208ENST00000448637 KRTAP3-1Q9BYR8 98 aa3.86□□□□□ -1.79
LPP-208ENST00000448637 ITPR1Q14643 2758 aa3.86□□□□□ -1.79
LPP-208ENST00000448637 ZNF469Q96JG9 3925 aaPredicted RBP3.86□□□□□ -1.79
LPP-208ENST00000448637 CSMD3Q7Z407 3707 aa3.85□□□□□ -1.79
LPP-208ENST00000448637 NBEAQ8NFP9 2946 aa3.85□□□□□ -1.79
LPP-208ENST00000448637 TENM4Q6N022 2769 aa3.84□□□□□ -1.8
LPP-208ENST00000448637 MGAQ8IWI9 3026 aa3.84□□□□□ -1.8
LPP-208ENST00000448637 KRTAP10-12P60413 245 aa3.82□□□□□ -1.8
LPP-208ENST00000448637 APCP25054 2843 aa3.82□□□□□ -1.8
LPP-208ENST00000448637 KRTAP10-6P60371 365 aaPredicted RBP3.82□□□□□ -1.8
LPP-208ENST00000448637 CELSR1Q9NYQ6 3014 aa3.81□□□□□ -1.8
LPP-208ENST00000448637 DCHS2Q6V1P9 2916 aa3.81□□□□□ -1.8
LPP-208ENST00000448637 HIVEP1P15822 2718 aa3.77□□□□□ -1.81
LPP-208ENST00000448637 ANK3Q12955 4377 aaKnown RBP3.77□□□□□ -1.81
LPP-208ENST00000448637 TENM3Q9P273 2699 aa3.76□□□□□ -1.81
LPP-208ENST00000448637 ZZEF1O43149 2961 aa3.75□□□□□ -1.81
LPP-208ENST00000448637 FLNCQ14315 2725 aa3.73□□□□□ -1.81
LPP-208ENST00000448637 LYSTQ99698 3801 aa3.73□□□□□ -1.81
LPP-208ENST00000448637 DSPP15924 2871 aaKnown RBP3.73□□□□□ -1.81
LPP-208ENST00000448637 ATMQ13315 3056 aa3.72□□□□□ -1.81
LPP-208ENST00000448637 ANK2Q01484 3957 aa3.71□□□□□ -1.82
LPP-208ENST00000448637 ADGRG4Q8IZF6 3080 aa3.7□□□□□ -1.82
LPP-208ENST00000448637 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
LPP-208ENST00000448637 TRRAPQ9Y4A5 3859 aa3.68□□□□□ -1.82
LPP-208ENST00000448637 UTP20O75691 2785 aaKnown RBP3.68□□□□□ -1.82
LPP-208ENST00000448637 LRBAP50851 2863 aa3.68□□□□□ -1.82
LPP-208ENST00000448637 ASH1LQ9NR48 2969 aaKnown RBP3.67□□□□□ -1.82
LPP-208ENST00000448637 TGP01266 2768 aa3.66□□□□□ -1.82
LPP-208ENST00000448637 KRTAP23-1A1A580 65 aa3.66□□□□□ -1.82
LPP-208ENST00000448637 TENM1Q9UKZ4 2725 aa3.65□□□□□ -1.82
LPP-208ENST00000448637 NIPBLQ6KC79 2804 aaeCLIP3.63□□□□□ -1.83
LPP-208ENST00000448637 TENM2Q9NT68 2774 aa3.63□□□□□ -1.83
LPP-208ENST00000448637 KRTAP10-5P60370 271 aa3.62□□□□□ -1.83
LPP-208ENST00000448637 DNAH1Q9P2D7 4330 aa3.59□□□□□ -1.83
LPP-208ENST00000448637 CRYBG3Q68DQ2 2970 aa3.59□□□□□ -1.83
LPP-208ENST00000448637 CMYA5Q8N3K9 4069 aa3.58□□□□□ -1.84
LPP-208ENST00000448637 KRTAP8-1Q8IUC2 63 aa3.58□□□□□ -1.84
LPP-208ENST00000448637 HRNRQ86YZ3 2850 aaPredicted RBP3.57□□□□□ -1.84
LPP-208ENST00000448637 LCE3AQ5TA76 89 aa3.57□□□□□ -1.84
LPP-208ENST00000448637 MT1HL1P0DM35 61 aa3.55□□□□□ -1.84
LPP-208ENST00000448637 TACC2O95359 2948 aa3.54□□□□□ -1.84
LPP-208ENST00000448637 PDZD2O15018 2839 aa3.53□□□□□ -1.84
LPP-208ENST00000448637 LCE2BO14633 110 aa3.53□□□□□ -1.84
LPP-208ENST00000448637 COL12A1Q99715 3063 aa3.52□□□□□ -1.85
LPP-208ENST00000448637 CELSR2Q9HCU4 2923 aa3.48□□□□□ -1.85
LPP-208ENST00000448637 NF1P21359 2839 aa3.48□□□□□ -1.85
LPP-208ENST00000448637 FBN3Q75N90 2809 aa3.46□□□□□ -1.86
LPP-208ENST00000448637 DNAH3Q8TD57 4116 aa3.45□□□□□ -1.86
LPP-208ENST00000448637 LORP23490 312 aaPredicted RBP3.44□□□□□ -1.86
LPP-208ENST00000448637 FRAS1Q86XX4 4008 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms