RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 CYSTM1Q9H1C7 97 aa10.2□□□□□ -0.78
ATG9A-215ENST00000446716 NOTCH2NLQ7Z3S9 236 aa10.19□□□□□ -0.78
ATG9A-215ENST00000446716 KRTAP13-2Q52LG2 175 aa10.18□□□□□ -0.78
ATG9A-215ENST00000446716 DCHS2Q6V1P9 2916 aa10.16□□□□□ -0.78
ATG9A-215ENST00000446716 TNRC18O15417 2968 aaPredicted RBP10.15□□□□□ -0.79
ATG9A-215ENST00000446716 ZANQ9Y493 2812 aa10.14□□□□□ -0.79
ATG9A-215ENST00000446716 RPL37P61927 97 aaKnown RBP10.13□□□□□ -0.79
ATG9A-215ENST00000446716 ADM2Q7Z4H4 148 aa10.13□□□□□ -0.79
ATG9A-215ENST00000446716 KRTAP13-1Q8IUC0 172 aa10.12□□□□□ -0.79
ATG9A-215ENST00000446716 PLAC4Q8WY50 150 aa10.11□□□□□ -0.79
ATG9A-215ENST00000446716 Q5VV11 94 aa10.09□□□□□ -0.79
ATG9A-215ENST00000446716 H1FX-AS1Q4G0G2 97 aa10.09□□□□□ -0.79
ATG9A-215ENST00000446716 CFAP47Q6ZTR5 3102 aa10.03□□□□□ -0.8
ATG9A-215ENST00000446716 TENM3Q9P273 2699 aa10.02□□□□□ -0.81
ATG9A-215ENST00000446716 DMXL1Q9Y485 3027 aa10□□□□□ -0.81
ATG9A-215ENST00000446716 NF1P21359 2839 aa9.96□□□□□ -0.81
ATG9A-215ENST00000446716 SPATA8Q6RVD6 105 aa9.96□□□□□ -0.81
ATG9A-215ENST00000446716 DNAH14Q0VDD8 3507 aa9.96□□□□□ -0.82
ATG9A-215ENST00000446716 C20orf166-AS1Q96NR2 134 aa9.94□□□□□ -0.82
ATG9A-215ENST00000446716 PRAC1Q96KF2 57 aa9.92□□□□□ -0.82
ATG9A-215ENST00000446716 ROMO1P60602 79 aa9.92□□□□□ -0.82
ATG9A-215ENST00000446716 TENM1Q9UKZ4 2725 aa9.91□□□□□ -0.82
ATG9A-215ENST00000446716 A8MUU9 505 aa9.88□□□□□ -0.83
ATG9A-215ENST00000446716 SPTBN5Q9NRC6 3674 aaKnown RBP9.84□□□□□ -0.83
ATG9A-215ENST00000446716 USP34Q70CQ2 3546 aa9.83□□□□□ -0.84
ATG9A-215ENST00000446716 TENM2Q9NT68 2774 aa9.81□□□□□ -0.84
ATG9A-215ENST00000446716 SPEGQ15772 3267 aa9.8□□□□□ -0.84
ATG9A-215ENST00000446716 A0A0A0MQY5 61 aa9.79□□□□□ -0.84
ATG9A-215ENST00000446716 HRNRQ86YZ3 2850 aaPredicted RBP9.79□□□□□ -0.84
ATG9A-215ENST00000446716 FBN2P35556 2912 aa9.78□□□□□ -0.84
ATG9A-215ENST00000446716 KRTAP1-4P0C5Y4 121 aa9.75□□□□□ -0.85
ATG9A-215ENST00000446716 MXRA5Q9NR99 2828 aa9.73□□□□□ -0.85
ATG9A-215ENST00000446716 PKD1L1Q8TDX9 2849 aa9.68□□□□□ -0.86
ATG9A-215ENST00000446716 XP32Q5T750 250 aa9.66□□□□□ -0.86
ATG9A-215ENST00000446716 A8MU10 97 aa9.65□□□□□ -0.86
ATG9A-215ENST00000446716 KRTAP16-1A8MUX0 517 aa9.63□□□□□ -0.87
ATG9A-215ENST00000446716 LOC400499M0QZD8 3231 aa9.61□□□□□ -0.87
ATG9A-215ENST00000446716 TPRXLQ17RH7 258 aa9.56□□□□□ -0.88
ATG9A-215ENST00000446716 CELSR1Q9NYQ6 3014 aa9.53□□□□□ -0.88
ATG9A-215ENST00000446716 MYO15AQ9UKN7 3530 aa9.51□□□□□ -0.89
ATG9A-215ENST00000446716 DCHS1Q96JQ0 3298 aa9.47□□□□□ -0.89
ATG9A-215ENST00000446716 A0A1B0GVY2 172 aa9.47□□□□□ -0.89
ATG9A-215ENST00000446716 A6NN06 94 aa9.47□□□□□ -0.89
ATG9A-215ENST00000446716 TNP1P09430 55 aa9.44□□□□□ -0.9
ATG9A-215ENST00000446716 VWFP04275 2813 aa9.43□□□□□ -0.9
ATG9A-215ENST00000446716 KRTAP13-3Q3SY46 172 aa9.37□□□□□ -0.91
ATG9A-215ENST00000446716 TGP01266 2768 aa9.35□□□□□ -0.91
ATG9A-215ENST00000446716 KRTAP10-8P60410 259 aa9.34□□□□□ -0.91
ATG9A-215ENST00000446716 KRTAP25-1Q3LHN0 102 aa9.34□□□□□ -0.91
ATG9A-215ENST00000446716 KRTAP10-10P60014 251 aa9.32□□□□□ -0.92
ATG9A-215ENST00000446716 PDZD2O15018 2839 aa9.29□□□□□ -0.92
ATG9A-215ENST00000446716 RELNP78509 3460 aa9.27□□□□□ -0.93
ATG9A-215ENST00000446716 FBN1P35555 2871 aaKnown RBP9.19□□□□□ -0.94
ATG9A-215ENST00000446716 OTOGQ6ZRI0 2925 aa9.17□□□□□ -0.94
ATG9A-215ENST00000446716 SRRM2Q9UQ35 2752 aaKnown RBP9.17□□□□□ -0.94
ATG9A-215ENST00000446716 MUC3AQ02505 3323 aa9.15□□□□□ -0.94
ATG9A-215ENST00000446716 WDFY3Q8IZQ1 3526 aa9.13□□□□□ -0.95
ATG9A-215ENST00000446716 PRO2289Q9P1D8 64 aa9.08□□□□□ -0.96
ATG9A-215ENST00000446716 PP632Q6XCG6 107 aa9.04□□□□□ -0.96
ATG9A-215ENST00000446716 C10orf95Q9H7T3 257 aa9.04□□□□□ -0.96
ATG9A-215ENST00000446716 NDUFAF8A1L188 74 aa9.04□□□□□ -0.96
ATG9A-215ENST00000446716 ZFHX3Q15911 3703 aa9.01□□□□□ -0.97
ATG9A-215ENST00000446716 P0C880 135 aa9□□□□□ -0.97
ATG9A-215ENST00000446716 NBPF19A0A087WUL8 3843 aa9□□□□□ -0.97
ATG9A-215ENST00000446716 LAMA5O15230 3695 aa8.98□□□□□ -0.97
ATG9A-215ENST00000446716 H0YAA0 97 aa8.97□□□□□ -0.97
ATG9A-215ENST00000446716 DMDP11532 3685 aa8.96□□□□□ -0.98
ATG9A-215ENST00000446716 ASPMQ8IZT6 3477 aa8.86□□□□□ -0.99
ATG9A-215ENST00000446716 FBN3Q75N90 2809 aa8.76□□□□□ -1.01
ATG9A-215ENST00000446716 ZFHX4Q86UP3 3567 aa8.75□□□□□ -1.01
ATG9A-215ENST00000446716 COL7A1Q02388 2944 aa8.62□□□□□ -1.03
ATG9A-215ENST00000446716 ANK3Q12955 4377 aaKnown RBP8.59□□□□□ -1.03
ATG9A-215ENST00000446716 MT1HL1P0DM35 61 aa8.57□□□□□ -1.04
ATG9A-215ENST00000446716 SMG1Q96Q15 3661 aaKnown RBP8.56□□□□□ -1.04
ATG9A-215ENST00000446716 MEGF8Q7Z7M0 2845 aa8.55□□□□□ -1.04
ATG9A-215ENST00000446716 KRTAP12-2P59991 146 aa8.52□□□□□ -1.05
ATG9A-215ENST00000446716 CSMD2Q7Z408 3487 aa8.52□□□□□ -1.05
ATG9A-215ENST00000446716 KRTAP3-1Q9BYR8 98 aa8.51□□□□□ -1.05
ATG9A-215ENST00000446716 CSMD1Q96PZ7 3565 aa8.49□□□□□ -1.05
ATG9A-215ENST00000446716 KRTAP4-5Q9BYR2 181 aa8.42□□□□□ -1.06
ATG9A-215ENST00000446716 KRTAP13-4Q3LI77 160 aa8.42□□□□□ -1.06
ATG9A-215ENST00000446716 TRRAPQ9Y4A5 3859 aa8.41□□□□□ -1.06
ATG9A-215ENST00000446716 KRTAP12-1P59990 96 aa8.41□□□□□ -1.06
ATG9A-215ENST00000446716 SPENQ96T58 3664 aaKnown RBP8.34□□□□□ -1.07
ATG9A-215ENST00000446716 KRTAP10-4P60372 401 aaPredicted RBP8.3□□□□□ -1.08
ATG9A-215ENST00000446716 SVEP1Q4LDE5 3571 aa8.28□□□□□ -1.08
ATG9A-215ENST00000446716 BSNQ9UPA5 3926 aa8.24□□□□□ -1.09
ATG9A-215ENST00000446716 KRTAP10-6P60371 365 aaPredicted RBP8.21□□□□□ -1.1
ATG9A-215ENST00000446716 CUBNO60494 3623 aa8.2□□□□□ -1.1
ATG9A-215ENST00000446716 KRTAP15-1Q3LI76 137 aa8.11□□□□□ -1.11
ATG9A-215ENST00000446716 HUWE1Q7Z6Z7 4374 aaKnown RBP8.06□□□□□ -1.12
ATG9A-215ENST00000446716 KRTAP3-3Q9BYR6 98 aa7.97□□□□□ -1.13
ATG9A-215ENST00000446716 KRTAP3-2Q9BYR7 98 aa7.93□□□□□ -1.14
ATG9A-215ENST00000446716 KRTAP10-12P60413 245 aa7.91□□□□□ -1.14
ATG9A-215ENST00000446716 ALMS1Q8TCU4 4167 aa7.86□□□□□ -1.15
ATG9A-215ENST00000446716 DNAH5Q8TE73 4624 aa7.77□□□□□ -1.17
ATG9A-215ENST00000446716 DNHD1Q96M86 4753 aa7.76□□□□□ -1.17
ATG9A-215ENST00000446716 CRCT1Q9UGL9 99 aa7.75□□□□□ -1.17
ATG9A-215ENST00000446716 DNAH9Q9NYC9 4486 aa7.72□□□□□ -1.17
ATG9A-215ENST00000446716 PLECQ15149 4684 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms