RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 DMBT1Q9UGM3 2413 aaPredicted RBP15.73■□□□□ 0.11
CGREF1-207ENST00000440612 A0A1B0GVX0 72 aa15.7■□□□□ 0.1
CGREF1-207ENST00000440612 NDUFB1O75438 58 aa15.69■□□□□ 0.1
CGREF1-207ENST00000440612 FAM236AA0A1B0GUQ0 79 aa15.66■□□□□ 0.1
CGREF1-207ENST00000440612 FAM236BA0A1B0GV22 79 aa15.66■□□□□ 0.1
CGREF1-207ENST00000440612 RETNLBQ9BQ08 111 aa15.66■□□□□ 0.1
CGREF1-207ENST00000440612 IGHV6-1A0A0B4J1U7 121 aa15.64■□□□□ 0.09
CGREF1-207ENST00000440612 NOTCH2NLQ7Z3S9 236 aa15.64■□□□□ 0.09
CGREF1-207ENST00000440612 SCGB1A1P11684 91 aa15.63■□□□□ 0.09
CGREF1-207ENST00000440612 MMP24-AS1A0A0U1RRL7 71 aa15.63■□□□□ 0.09
CGREF1-207ENST00000440612 HCG22E2RYF7 251 aa15.6■□□□□ 0.09
CGREF1-207ENST00000440612 C8orf17Q9NRJ1 99 aa15.6■□□□□ 0.09
CGREF1-207ENST00000440612 PCLOQ9Y6V0 5065 aa15.55■□□□□ 0.08
CGREF1-207ENST00000440612 WFDC13Q8IUB5 93 aa15.54■□□□□ 0.08
CGREF1-207ENST00000440612 CASC2Q6XLA1 102 aa15.51■□□□□ 0.07
CGREF1-207ENST00000440612 C8orf87E5RJ46 101 aa15.5■□□□□ 0.07
CGREF1-207ENST00000440612 hDV103S1A0JD37 113 aa15.48■□□□□ 0.07
CGREF1-207ENST00000440612 LINC00313P59037 77 aa15.47■□□□□ 0.07
CGREF1-207ENST00000440612 J3QL48 77 aa15.45■□□□□ 0.06
CGREF1-207ENST00000440612 KRTAP16-1A8MUX0 517 aa15.44■□□□□ 0.06
CGREF1-207ENST00000440612 FP248Q71RG6 208 aaPredicted RBP15.44■□□□□ 0.06
CGREF1-207ENST00000440612 ATOX1O00244 68 aa15.42■□□□□ 0.06
CGREF1-207ENST00000440612 TMEM254Q8TBM7 123 aa15.41■□□□□ 0.06
CGREF1-207ENST00000440612 MRPL34Q9BQ48 92 aaKnown RBP15.38■□□□□ 0.05
CGREF1-207ENST00000440612 OCR1Q9BZK8 76 aa15.38■□□□□ 0.05
CGREF1-207ENST00000440612 IGLV7-46A0A075B6I9 117 aa15.33■□□□□ 0.04
CGREF1-207ENST00000440612 C9orf92A6NGG3 77 aa15.33■□□□□ 0.04
CGREF1-207ENST00000440612 Q8N9P0 234 aaPredicted RBP15.29■□□□□ 0.04
CGREF1-207ENST00000440612 ANAPC13Q9BS18 74 aa15.29■□□□□ 0.04
CGREF1-207ENST00000440612 PRR4Q16378 134 aa15.26■□□□□ 0.03
CGREF1-207ENST00000440612 KRTAP13-3Q3SY46 172 aa15.26■□□□□ 0.03
CGREF1-207ENST00000440612 TRAV7A0A075B6U4 112 aa15.25■□□□□ 0.03
CGREF1-207ENST00000440612 SMIM20Q8N5G0 67 aa15.25■□□□□ 0.03
CGREF1-207ENST00000440612 SERP2Q8N6R1 65 aa15.25■□□□□ 0.03
CGREF1-207ENST00000440612 NDUFS5O43920 106 aa15.19■□□□□ 0.02
CGREF1-207ENST00000440612 PCP4P48539 62 aa15.17■□□□□ 0.02
CGREF1-207ENST00000440612 C20orf166-AS1Q96NR2 134 aa15.17■□□□□ 0.02
CGREF1-207ENST00000440612 COX7CP15954 63 aa15.16■□□□□ 0.02
CGREF1-207ENST00000440612 TP53AIP1Q9HCN2 124 aa15.16■□□□□ 0.02
CGREF1-207ENST00000440612 A8MUU9 505 aa15.15■□□□□ 0.02
CGREF1-207ENST00000440612 UQCRQO14949 82 aa15.15■□□□□ 0.02
CGREF1-207ENST00000440612 HERC1Q15751 4861 aa15.13■□□□□ 0.01
CGREF1-207ENST00000440612 TPRXLQ17RH7 258 aa15.12■□□□□ 0.01
CGREF1-207ENST00000440612 Q5W150 140 aa15.1■□□□□ 0.01
CGREF1-207ENST00000440612 XP32Q5T750 250 aa15.09■□□□□ 0.01
CGREF1-207ENST00000440612 LPAP08519 4548 aa15.08■□□□□ 0
CGREF1-207ENST00000440612 CCDC179H3BU77 68 aa15.06■□□□□ 0
CGREF1-207ENST00000440612 Q75L30 129 aa15.05■□□□□ -0
CGREF1-207ENST00000440612 C5orf47Q569G3 176 aa15.04■□□□□ -0
CGREF1-207ENST00000440612 TRAV22A0A0B4J277 110 aa15.02□□□□□ -0.01
CGREF1-207ENST00000440612 H0Y9P7 68 aa15□□□□□ -0.01
CGREF1-207ENST00000440612 C20orf197Q8N268 126 aa14.97□□□□□ -0.01
CGREF1-207ENST00000440612 A0A0U1RQV1 116 aa14.95□□□□□ -0.02
CGREF1-207ENST00000440612 RPL37P61927 97 aaKnown RBP14.95□□□□□ -0.02
CGREF1-207ENST00000440612 ZCCHC13Q8WW36 166 aaKnown RBP14.95□□□□□ -0.02
CGREF1-207ENST00000440612 LRP2P98164 4655 aa14.95□□□□□ -0.02
CGREF1-207ENST00000440612 HMCN2Q8NDA2 5059 aa14.94□□□□□ -0.02
CGREF1-207ENST00000440612 MP68P56378 58 aa14.91□□□□□ -0.02
CGREF1-207ENST00000440612 CYSTM1Q9H1C7 97 aa14.9□□□□□ -0.02
CGREF1-207ENST00000440612 SNURFQ9Y675 71 aa14.9□□□□□ -0.02
CGREF1-207ENST00000440612 KLKP1Q107X0 134 aa14.89□□□□□ -0.03
CGREF1-207ENST00000440612 LINC00208Q96KT6 92 aa14.89□□□□□ -0.03
CGREF1-207ENST00000440612 H3BPC8 53 aa14.86□□□□□ -0.03
CGREF1-207ENST00000440612 C1orf64Q8NEQ6 169 aa14.85□□□□□ -0.03
CGREF1-207ENST00000440612 ATP11AUNQ6ZP68 121 aa14.77□□□□□ -0.04
CGREF1-207ENST00000440612 IGKV2-30P06310 120 aa14.76□□□□□ -0.05
CGREF1-207ENST00000440612 LOC101927531A0A1B0GV80 90 aa14.75□□□□□ -0.05
CGREF1-207ENST00000440612 CYP4F30PQ9H0H9 118 aa14.73□□□□□ -0.05
CGREF1-207ENST00000440612 H7BZZ5 65 aa14.69□□□□□ -0.06
CGREF1-207ENST00000440612 PCOTHQ58A44 107 aa14.68□□□□□ -0.06
CGREF1-207ENST00000440612 IGKV2D-30A0A075B6S6 120 aa14.68□□□□□ -0.06
CGREF1-207ENST00000440612 NDUFC1O43677 76 aa14.61□□□□□ -0.07
CGREF1-207ENST00000440612 SPINK7P58062 85 aa14.61□□□□□ -0.07
CGREF1-207ENST00000440612 C7orf65Q6ZTY9 151 aa14.61□□□□□ -0.07
CGREF1-207ENST00000440612 MUC17Q685J3 4493 aa14.6□□□□□ -0.07
CGREF1-207ENST00000440612 SEC61BP60468 96 aaKnown RBP14.54□□□□□ -0.08
CGREF1-207ENST00000440612 HRES1P13985 223 aa14.49□□□□□ -0.09
CGREF1-207ENST00000440612 TMEM258P61165 79 aa14.42□□□□□ -0.1
CGREF1-207ENST00000440612 KRTAP4-1Q9BYQ7 146 aa14.42□□□□□ -0.1
CGREF1-207ENST00000440612 SPANXA2-OT1Q8N9U9 137 aa14.42□□□□□ -0.1
CGREF1-207ENST00000440612 C4orf26Q17RF5 130 aa14.34□□□□□ -0.11
CGREF1-207ENST00000440612 FAM236DA0A1B0GTK5 79 aa14.33□□□□□ -0.12
CGREF1-207ENST00000440612 FAM236CP0DP71 79 aa14.33□□□□□ -0.12
CGREF1-207ENST00000440612 UBR4Q5T4S7 5183 aa14.31□□□□□ -0.12
CGREF1-207ENST00000440612 MPLKIPQ8TAP9 179 aa14.27□□□□□ -0.12
CGREF1-207ENST00000440612 KRTAP3-1Q9BYR8 98 aa14.26□□□□□ -0.13
CGREF1-207ENST00000440612 MUC2Q02817 5179 aa14.25□□□□□ -0.13
CGREF1-207ENST00000440612 ATP5EP56381 51 aaPredicted RBP14.23□□□□□ -0.13
CGREF1-207ENST00000440612 DMAC1Q96GE9 116 aa14.22□□□□□ -0.13
CGREF1-207ENST00000440612 COX6B2Q6YFQ2 88 aa14.2□□□□□ -0.14
CGREF1-207ENST00000440612 RNF213Q63HN8 5207 aa14.14□□□□□ -0.15
CGREF1-207ENST00000440612 A8MUN3 132 aa14.08□□□□□ -0.16
CGREF1-207ENST00000440612 KRTAP19-2Q3LHN2 52 aa14.05□□□□□ -0.16
CGREF1-207ENST00000440612 ACYP2P14621 99 aa14.04□□□□□ -0.16
CGREF1-207ENST00000440612 RBM12B-AS1Q9P1G2 102 aa14.02□□□□□ -0.16
CGREF1-207ENST00000440612 SERP1Q9Y6X1 66 aa13.98□□□□□ -0.17
CGREF1-207ENST00000440612 COA5Q86WW8 74 aa13.98□□□□□ -0.17
CGREF1-207ENST00000440612 H1FX-AS1Q4G0G2 97 aa13.89□□□□□ -0.19
CGREF1-207ENST00000440612 RPS28P62857 69 aaKnown RBP13.88□□□□□ -0.19
CGREF1-207ENST00000440612 LCE2CQ5TA81 110 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms