RNA–Protein interactions for RNA: ENST00000440192.1

SDCBPP1-201, Transcript of syndecan binding protein pseudogene 1, humanhuman

BASIC

Gene SDCBPP1, Length 890 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP1-201ENST00000440192 TRANK1O15050 2925 aa0.82□□□□□ -2.28
SDCBPP1-201ENST00000440192 SRRM2Q9UQ35 2752 aaKnown RBP0.82□□□□□ -2.28
SDCBPP1-201ENST00000440192 NF1P21359 2839 aa0.82□□□□□ -2.28
SDCBPP1-201ENST00000440192 BDP1A6H8Y1 2624 aa0.82□□□□□ -2.28
SDCBPP1-201ENST00000440192 EP300Q09472 2414 aaPredicted RBP0.81□□□□□ -2.28
SDCBPP1-201ENST00000440192 HIVEP3Q5T1R4 2406 aa0.81□□□□□ -2.28
SDCBPP1-201ENST00000440192 ABCA2Q9BZC7 2435 aa0.81□□□□□ -2.28
SDCBPP1-201ENST00000440192 F8P00451 2351 aa0.81□□□□□ -2.28
SDCBPP1-201ENST00000440192 ACANP16112 2415 aa0.81□□□□□ -2.28
SDCBPP1-201ENST00000440192 DMDP11532 3685 aa0.8□□□□□ -2.28
SDCBPP1-201ENST00000440192 NBPF19A0A087WUL8 3843 aa0.8□□□□□ -2.28
SDCBPP1-201ENST00000440192 ZZEF1O43149 2961 aa0.8□□□□□ -2.28
SDCBPP1-201ENST00000440192 SPTBN5Q9NRC6 3674 aaKnown RBP0.8□□□□□ -2.28
SDCBPP1-201ENST00000440192 CMYA5Q8N3K9 4069 aa0.8□□□□□ -2.28
SDCBPP1-201ENST00000440192 U3KQA8 63 aa0.8□□□□□ -2.28
SDCBPP1-201ENST00000440192 NIPBLQ6KC79 2804 aaeCLIP0.8□□□□□ -2.28
SDCBPP1-201ENST00000440192 CEP290O15078 2479 aa0.8□□□□□ -2.28
SDCBPP1-201ENST00000440192 USP24Q9UPU5 2620 aa0.8□□□□□ -2.28
SDCBPP1-201ENST00000440192 BSNQ9UPA5 3926 aa0.8□□□□□ -2.28
SDCBPP1-201ENST00000440192 PKD1L2Q7Z442 2459 aa0.79□□□□□ -2.28
SDCBPP1-201ENST00000440192 LRRK2Q5S007 2527 aa0.79□□□□□ -2.28
SDCBPP1-201ENST00000440192 DNAH11Q96DT5 4516 aa0.79□□□□□ -2.28
SDCBPP1-201ENST00000440192 ITPR3Q14573 2671 aa0.79□□□□□ -2.28
SDCBPP1-201ENST00000440192 C9orf92A6NGG3 77 aa0.79□□□□□ -2.28
SDCBPP1-201ENST00000440192 APCP25054 2843 aa0.79□□□□□ -2.28
SDCBPP1-201ENST00000440192 USP9YO00507 2555 aaPredicted RBP0.79□□□□□ -2.28
SDCBPP1-201ENST00000440192 PRKDCP78527 4128 aaKnown RBP0.79□□□□□ -2.28
SDCBPP1-201ENST00000440192 NBASA2RRP1 2371 aa0.78□□□□□ -2.28
SDCBPP1-201ENST00000440192 TLN1Q9Y490 2541 aaKnown RBP0.78□□□□□ -2.28
SDCBPP1-201ENST00000440192 HECTD1Q9ULT8 2610 aa0.78□□□□□ -2.28
SDCBPP1-201ENST00000440192 A0A096LPF7 62 aa0.78□□□□□ -2.28
SDCBPP1-201ENST00000440192 RANBP2P49792 3224 aaKnown RBP0.78□□□□□ -2.28
SDCBPP1-201ENST00000440192 TRRAPQ9Y4A5 3859 aa0.78□□□□□ -2.29
SDCBPP1-201ENST00000440192 CRYBG3Q68DQ2 2970 aa0.78□□□□□ -2.29
SDCBPP1-201ENST00000440192 FRYLO94915 3013 aa0.78□□□□□ -2.29
SDCBPP1-201ENST00000440192 KALRNO60229 2985 aa0.77□□□□□ -2.29
SDCBPP1-201ENST00000440192 CFAP54Q96N23 3096 aa0.77□□□□□ -2.29
SDCBPP1-201ENST00000440192 SACSQ9NZJ4 4579 aa0.77□□□□□ -2.29
SDCBPP1-201ENST00000440192 SONP18583 2426 aaKnown RBP0.77□□□□□ -2.29
SDCBPP1-201ENST00000440192 SPG11Q96JI7 2443 aa0.77□□□□□ -2.29
SDCBPP1-201ENST00000440192 PTPN13Q12923 2485 aa0.77□□□□□ -2.29
SDCBPP1-201ENST00000440192 COL6A5A8TX70 2615 aa0.77□□□□□ -2.29
SDCBPP1-201ENST00000440192 FRYQ5TBA9 3013 aa0.77□□□□□ -2.29
SDCBPP1-201ENST00000440192 PRUNE2Q8WUY3 3088 aa0.77□□□□□ -2.29
SDCBPP1-201ENST00000440192 CFAP47Q6ZTR5 3102 aa0.77□□□□□ -2.29
SDCBPP1-201ENST00000440192 ANK2Q01484 3957 aa0.77□□□□□ -2.29
SDCBPP1-201ENST00000440192 DNAH1Q9P2D7 4330 aa0.76□□□□□ -2.29
SDCBPP1-201ENST00000440192 ABCA12Q86UK0 2595 aa0.76□□□□□ -2.29
SDCBPP1-201ENST00000440192 CACNA1AO00555 2505 aa0.76□□□□□ -2.29
SDCBPP1-201ENST00000440192 SPART-AS1P0CW21 52 aa0.76□□□□□ -2.29
SDCBPP1-201ENST00000440192 HTN1P15515 57 aa0.76□□□□□ -2.29
SDCBPP1-201ENST00000440192 DEFB133Q30KQ1 61 aa0.76□□□□□ -2.29
SDCBPP1-201ENST00000440192 LYSTQ99698 3801 aa0.76□□□□□ -2.29
SDCBPP1-201ENST00000440192 GOLGB1Q14789 3259 aaKnown RBP0.76□□□□□ -2.29
SDCBPP1-201ENST00000440192 COL6A3P12111 3177 aa0.76□□□□□ -2.29
SDCBPP1-201ENST00000440192 FBN2P35556 2912 aa0.76□□□□□ -2.29
SDCBPP1-201ENST00000440192 CFAP46Q8IYW2 2715 aa0.76□□□□□ -2.29
SDCBPP1-201ENST00000440192 POLQO75417 2590 aa0.76□□□□□ -2.29
SDCBPP1-201ENST00000440192 DMBT1Q9UGM3 2413 aaPredicted RBP0.76□□□□□ -2.29
SDCBPP1-201ENST00000440192 DNAH2Q9P225 4427 aa0.75□□□□□ -2.29
SDCBPP1-201ENST00000440192 TRIOO75962 3097 aa0.75□□□□□ -2.29
SDCBPP1-201ENST00000440192 SMG1Q96Q15 3661 aaKnown RBP0.75□□□□□ -2.29
SDCBPP1-201ENST00000440192 VPS13BQ7Z7G8 4022 aa0.75□□□□□ -2.29
SDCBPP1-201ENST00000440192 CELSR1Q9NYQ6 3014 aa0.75□□□□□ -2.29
SDCBPP1-201ENST00000440192 SPINK1P00995 79 aa0.75□□□□□ -2.29
SDCBPP1-201ENST00000440192 APLNQ9ULZ1 77 aa0.75□□□□□ -2.29
SDCBPP1-201ENST00000440192 UTP20O75691 2785 aaKnown RBP0.75□□□□□ -2.29
SDCBPP1-201ENST00000440192 CENPEQ02224 2701 aa0.75□□□□□ -2.29
SDCBPP1-201ENST00000440192 FLNCQ14315 2725 aa0.75□□□□□ -2.29
SDCBPP1-201ENST00000440192 NSD1Q96L73 2696 aaPredicted RBP0.75□□□□□ -2.29
SDCBPP1-201ENST00000440192 TENM3Q9P273 2699 aa0.75□□□□□ -2.29
SDCBPP1-201ENST00000440192 DNAH6Q9C0G6 4158 aa0.75□□□□□ -2.29
SDCBPP1-201ENST00000440192 CELSR3Q9NYQ7 3312 aa0.75□□□□□ -2.29
SDCBPP1-201ENST00000440192 TLN2Q9Y4G6 2542 aa0.75□□□□□ -2.29
SDCBPP1-201ENST00000440192 CCDC168Q8NDH2 2452 aa0.75□□□□□ -2.29
SDCBPP1-201ENST00000440192 VPS13AQ96RL7 3174 aa0.75□□□□□ -2.29
SDCBPP1-201ENST00000440192 DYNC2H1Q8NCM8 4307 aaKnown RBP0.75□□□□□ -2.29
SDCBPP1-201ENST00000440192 USP34Q70CQ2 3546 aa0.75□□□□□ -2.29
SDCBPP1-201ENST00000440192 DNAH3Q8TD57 4116 aa0.74□□□□□ -2.29
SDCBPP1-201ENST00000440192 UTRNP46939 3433 aa0.74□□□□□ -2.29
SDCBPP1-201ENST00000440192 HTTP42858 3142 aa0.74□□□□□ -2.29
SDCBPP1-201ENST00000440192 ZFYVE26Q68DK2 2539 aa0.74□□□□□ -2.29
SDCBPP1-201ENST00000440192 SPTAN1Q13813 2472 aaKnown RBP0.74□□□□□ -2.29
SDCBPP1-201ENST00000440192 MXRA5Q9NR99 2828 aa0.74□□□□□ -2.29
SDCBPP1-201ENST00000440192 TNP1P09430 55 aa0.74□□□□□ -2.29
SDCBPP1-201ENST00000440192 ZNF292O60281 2723 aa0.74□□□□□ -2.29
SDCBPP1-201ENST00000440192 ITPR2Q14571 2701 aa0.74□□□□□ -2.29
SDCBPP1-201ENST00000440192 NBEAL1Q6ZS30 2694 aa0.74□□□□□ -2.29
SDCBPP1-201ENST00000440192 GCN1Q92616 2671 aaKnown RBP0.74□□□□□ -2.29
SDCBPP1-201ENST00000440192 BOD1L1Q8NFC6 3051 aa0.74□□□□□ -2.29
SDCBPP1-201ENST00000440192 MYO9AB2RTY4 2548 aa0.74□□□□□ -2.29
SDCBPP1-201ENST00000440192 SPENQ96T58 3664 aaKnown RBP0.74□□□□□ -2.29
SDCBPP1-201ENST00000440192 HUWE1Q7Z6Z7 4374 aaKnown RBP0.73□□□□□ -2.29
SDCBPP1-201ENST00000440192 DNAH12Q6ZR08 3092 aa0.73□□□□□ -2.29
SDCBPP1-201ENST00000440192 MYCBP2O75592 4640 aa0.73□□□□□ -2.29
SDCBPP1-201ENST00000440192 DNAH8Q96JB1 4490 aa0.73□□□□□ -2.29
SDCBPP1-201ENST00000440192 MTORP42345 2549 aa0.73□□□□□ -2.29
SDCBPP1-201ENST00000440192 DNAH7Q8WXX0 4024 aa0.73□□□□□ -2.29
SDCBPP1-201ENST00000440192 A0A0D9SG42 100 aa0.73□□□□□ -2.29
SDCBPP1-201ENST00000440192 KRTAP2-3P0C7H8 128 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms