RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 KRTAP13-2Q52LG2 175 aa8.48□□□□□ -1.05
TNFRSF1A-204ENST00000440083 SMIM20Q8N5G0 67 aa8.48□□□□□ -1.05
TNFRSF1A-204ENST00000440083 SERP2Q8N6R1 65 aa8.46□□□□□ -1.06
TNFRSF1A-204ENST00000440083 A8MWP4 228 aa8.45□□□□□ -1.06
TNFRSF1A-204ENST00000440083 NDUFB1O75438 58 aa8.45□□□□□ -1.06
TNFRSF1A-204ENST00000440083 COX7CP15954 63 aa8.45□□□□□ -1.06
TNFRSF1A-204ENST00000440083 HCG22E2RYF7 251 aa8.44□□□□□ -1.06
TNFRSF1A-204ENST00000440083 UQCRQO14949 82 aa8.44□□□□□ -1.06
TNFRSF1A-204ENST00000440083 TYMSOSQ8TAI1 123 aa8.44□□□□□ -1.06
TNFRSF1A-204ENST00000440083 TRAV7A0A075B6U4 112 aa8.43□□□□□ -1.06
TNFRSF1A-204ENST00000440083 CCDC179H3BU77 68 aa8.42□□□□□ -1.06
TNFRSF1A-204ENST00000440083 C4orf48Q5BLP8 95 aa8.42□□□□□ -1.06
TNFRSF1A-204ENST00000440083 Q96NJ1 140 aa8.42□□□□□ -1.06
TNFRSF1A-204ENST00000440083 PRR15Q8IV56 129 aa8.41□□□□□ -1.06
TNFRSF1A-204ENST00000440083 LIMD2Q9BT23 127 aa8.41□□□□□ -1.06
TNFRSF1A-204ENST00000440083 ASB16-AS1Q495Z4 193 aa8.38□□□□□ -1.07
TNFRSF1A-204ENST00000440083 WFDC13Q8IUB5 93 aa8.38□□□□□ -1.07
TNFRSF1A-204ENST00000440083 CASC2Q6XLA1 102 aa8.36□□□□□ -1.07
TNFRSF1A-204ENST00000440083 A0A1B0GVX0 72 aa8.35□□□□□ -1.07
TNFRSF1A-204ENST00000440083 Q5XG85 94 aa8.35□□□□□ -1.07
TNFRSF1A-204ENST00000440083 LINC00304Q8N9R0 145 aa8.34□□□□□ -1.07
TNFRSF1A-204ENST00000440083 IGHV6-1A0A0B4J1U7 121 aa8.33□□□□□ -1.08
TNFRSF1A-204ENST00000440083 SPINK1P00995 79 aa8.33□□□□□ -1.08
TNFRSF1A-204ENST00000440083 SPAG11AQ6PDA7 123 aa8.33□□□□□ -1.08
TNFRSF1A-204ENST00000440083 MMP24-AS1A0A0U1RRL7 71 aa8.32□□□□□ -1.08
TNFRSF1A-204ENST00000440083 OCR1Q9BZK8 76 aa8.31□□□□□ -1.08
TNFRSF1A-204ENST00000440083 C8orf17Q9NRJ1 99 aa8.31□□□□□ -1.08
TNFRSF1A-204ENST00000440083 hDV103S1A0JD37 113 aa8.29□□□□□ -1.08
TNFRSF1A-204ENST00000440083 C20orf197Q8N268 126 aa8.29□□□□□ -1.08
TNFRSF1A-204ENST00000440083 UBR4Q5T4S7 5183 aa8.29□□□□□ -1.08
TNFRSF1A-204ENST00000440083 RPS29P62273 56 aaKnown RBP8.28□□□□□ -1.08
TNFRSF1A-204ENST00000440083 C8orf87E5RJ46 101 aa8.27□□□□□ -1.09
TNFRSF1A-204ENST00000440083 C1orf195Q5TG92 126 aa8.27□□□□□ -1.09
TNFRSF1A-204ENST00000440083 LRP2P98164 4655 aa8.25□□□□□ -1.09
TNFRSF1A-204ENST00000440083 RETNLBQ9BQ08 111 aa8.25□□□□□ -1.09
TNFRSF1A-204ENST00000440083 TMEM254Q8TBM7 123 aa8.24□□□□□ -1.09
TNFRSF1A-204ENST00000440083 LPAP08519 4548 aa8.22□□□□□ -1.09
TNFRSF1A-204ENST00000440083 PRR4Q16378 134 aa8.22□□□□□ -1.09
TNFRSF1A-204ENST00000440083 MRPL34Q9BQ48 92 aaKnown RBP8.22□□□□□ -1.09
TNFRSF1A-204ENST00000440083 LCE2BO14633 110 aa8.21□□□□□ -1.1
TNFRSF1A-204ENST00000440083 NDUFS5O43920 106 aa8.21□□□□□ -1.1
TNFRSF1A-204ENST00000440083 C5orf47Q569G3 176 aa8.21□□□□□ -1.1
TNFRSF1A-204ENST00000440083 SNURFQ9Y675 71 aa8.21□□□□□ -1.1
TNFRSF1A-204ENST00000440083 MP68P56378 58 aa8.2□□□□□ -1.1
TNFRSF1A-204ENST00000440083 KLKP1Q107X0 134 aa8.2□□□□□ -1.1
TNFRSF1A-204ENST00000440083 TP53AIP1Q9HCN2 124 aa8.19□□□□□ -1.1
TNFRSF1A-204ENST00000440083 A0A0U1RQV1 116 aa8.18□□□□□ -1.1
TNFRSF1A-204ENST00000440083 LINC00313P59037 77 aa8.18□□□□□ -1.1
TNFRSF1A-204ENST00000440083 NDUFC1O43677 76 aa8.17□□□□□ -1.1
TNFRSF1A-204ENST00000440083 H0Y9P7 68 aa8.16□□□□□ -1.1
TNFRSF1A-204ENST00000440083 TMEM258P61165 79 aa8.16□□□□□ -1.1
TNFRSF1A-204ENST00000440083 NOTCH2NLQ7Z3S9 236 aa8.16□□□□□ -1.1
TNFRSF1A-204ENST00000440083 CYSTM1Q9H1C7 97 aa8.16□□□□□ -1.1
TNFRSF1A-204ENST00000440083 TRAV22A0A0B4J277 110 aa8.14□□□□□ -1.11
TNFRSF1A-204ENST00000440083 H3BPC8 53 aa8.13□□□□□ -1.11
TNFRSF1A-204ENST00000440083 H7BZZ5 65 aa8.1□□□□□ -1.11
TNFRSF1A-204ENST00000440083 IGLV7-46A0A075B6I9 117 aa8.09□□□□□ -1.11
TNFRSF1A-204ENST00000440083 LINC00208Q96KT6 92 aa8.09□□□□□ -1.11
TNFRSF1A-204ENST00000440083 FAM236DA0A1B0GTK5 79 aa8.08□□□□□ -1.12
TNFRSF1A-204ENST00000440083 FAM236CP0DP71 79 aa8.08□□□□□ -1.12
TNFRSF1A-204ENST00000440083 RNF213Q63HN8 5207 aa8.08□□□□□ -1.12
TNFRSF1A-204ENST00000440083 ZCCHC13Q8WW36 166 aaKnown RBP8.07□□□□□ -1.12
TNFRSF1A-204ENST00000440083 ATP5EP56381 51 aaPredicted RBP8.05□□□□□ -1.12
TNFRSF1A-204ENST00000440083 C1orf64Q8NEQ6 169 aa8.05□□□□□ -1.12
TNFRSF1A-204ENST00000440083 KRTAP16-1A8MUX0 517 aa8.04□□□□□ -1.12
TNFRSF1A-204ENST00000440083 FP248Q71RG6 208 aaPredicted RBP8.04□□□□□ -1.12
TNFRSF1A-204ENST00000440083 Q8N9P0 234 aaPredicted RBP8.04□□□□□ -1.12
TNFRSF1A-204ENST00000440083 TPRXLQ17RH7 258 aa8.01□□□□□ -1.13
TNFRSF1A-204ENST00000440083 MUC17Q685J3 4493 aa7.99□□□□□ -1.13
TNFRSF1A-204ENST00000440083 KRTAP13-3Q3SY46 172 aa7.99□□□□□ -1.13
TNFRSF1A-204ENST00000440083 LOC101927531A0A1B0GV80 90 aa7.98□□□□□ -1.13
TNFRSF1A-204ENST00000440083 C9orf92A6NGG3 77 aa7.97□□□□□ -1.13
TNFRSF1A-204ENST00000440083 Q5W150 140 aa7.95□□□□□ -1.14
TNFRSF1A-204ENST00000440083 PCOTHQ58A44 107 aa7.93□□□□□ -1.14
TNFRSF1A-204ENST00000440083 SPANXA2-OT1Q8N9U9 137 aa7.9□□□□□ -1.14
TNFRSF1A-204ENST00000440083 SERP1Q9Y6X1 66 aa7.9□□□□□ -1.14
TNFRSF1A-204ENST00000440083 C20orf166-AS1Q96NR2 134 aa7.89□□□□□ -1.15
TNFRSF1A-204ENST00000440083 A8MUU9 505 aa7.88□□□□□ -1.15
TNFRSF1A-204ENST00000440083 RPS28P62857 69 aaKnown RBP7.88□□□□□ -1.15
TNFRSF1A-204ENST00000440083 IGKV2-30P06310 120 aa7.87□□□□□ -1.15
TNFRSF1A-204ENST00000440083 XP32Q5T750 250 aa7.86□□□□□ -1.15
TNFRSF1A-204ENST00000440083 CYP4F30PQ9H0H9 118 aa7.86□□□□□ -1.15
TNFRSF1A-204ENST00000440083 MUC2Q02817 5179 aa7.83□□□□□ -1.16
TNFRSF1A-204ENST00000440083 IGKV2D-30A0A075B6S6 120 aa7.83□□□□□ -1.16
TNFRSF1A-204ENST00000440083 Q75L30 129 aa7.82□□□□□ -1.16
TNFRSF1A-204ENST00000440083 C7orf65Q6ZTY9 151 aa7.81□□□□□ -1.16
TNFRSF1A-204ENST00000440083 HRES1P13985 223 aa7.76□□□□□ -1.17
TNFRSF1A-204ENST00000440083 SEC61BP60468 96 aaKnown RBP7.74□□□□□ -1.17
TNFRSF1A-204ENST00000440083 RPL37P61927 97 aaKnown RBP7.74□□□□□ -1.17
TNFRSF1A-204ENST00000440083 ATP11AUNQ6ZP68 121 aa7.74□□□□□ -1.17
TNFRSF1A-204ENST00000440083 KRTAP4-1Q9BYQ7 146 aa7.74□□□□□ -1.17
TNFRSF1A-204ENST00000440083 SMIM26A0A096LP01 95 aa7.71□□□□□ -1.18
TNFRSF1A-204ENST00000440083 LCE2AQ5TA79 106 aaPredicted RBP7.71□□□□□ -1.18
TNFRSF1A-204ENST00000440083 COA5Q86WW8 74 aa7.68□□□□□ -1.18
TNFRSF1A-204ENST00000440083 ACYP2P14621 99 aa7.66□□□□□ -1.18
TNFRSF1A-204ENST00000440083 DMAC1Q96GE9 116 aa7.66□□□□□ -1.18
TNFRSF1A-204ENST00000440083 FAT4Q6V0I7 4981 aa7.66□□□□□ -1.18
TNFRSF1A-204ENST00000440083 SPINK7P58062 85 aa7.65□□□□□ -1.18
TNFRSF1A-204ENST00000440083 LCE2CQ5TA81 110 aa7.62□□□□□ -1.19
TNFRSF1A-204ENST00000440083 CHKB-CPT1BH3BT56 60 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms