RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 LCE1DQ5T752 114 aa4.27□□□□□ -1.73
UBR3-205ENST00000439681 Q5XG85 94 aa4.27□□□□□ -1.73
UBR3-205ENST00000439681 A0A087WSZ3 146 aa4.26□□□□□ -1.73
UBR3-205ENST00000439681 DMBT1Q9UGM3 2413 aaPredicted RBP4.26□□□□□ -1.73
UBR3-205ENST00000439681 ANAPC13Q9BS18 74 aa4.25□□□□□ -1.73
UBR3-205ENST00000439681 A0A1B0GW54 56 aa4.24□□□□□ -1.73
UBR3-205ENST00000439681 PRO0628Q9UI54 55 aa4.24□□□□□ -1.73
UBR3-205ENST00000439681 HERC1Q15751 4861 aa4.24□□□□□ -1.73
UBR3-205ENST00000439681 C4orf26Q17RF5 130 aa4.24□□□□□ -1.73
UBR3-205ENST00000439681 ASB16-AS1Q495Z4 193 aa4.24□□□□□ -1.73
UBR3-205ENST00000439681 LIMD2Q9BT23 127 aa4.24□□□□□ -1.73
UBR3-205ENST00000439681 KRTAP4-9Q9BYQ8 210 aa4.24□□□□□ -1.73
UBR3-205ENST00000439681 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
UBR3-205ENST00000439681 C1orf195Q5TG92 126 aa4.23□□□□□ -1.73
UBR3-205ENST00000439681 Q96NJ1 140 aa4.22□□□□□ -1.73
UBR3-205ENST00000439681 RETNLBQ9BQ08 111 aa4.22□□□□□ -1.73
UBR3-205ENST00000439681 LINC00846Q9NV44 126 aa4.22□□□□□ -1.73
UBR3-205ENST00000439681 J3KT08 172 aa4.21□□□□□ -1.73
UBR3-205ENST00000439681 LINC00472Q9H8W2 130 aa4.21□□□□□ -1.73
UBR3-205ENST00000439681 J3QR89 54 aa4.21□□□□□ -1.74
UBR3-205ENST00000439681 NREPQ16612 68 aa4.2□□□□□ -1.74
UBR3-205ENST00000439681 DEFB116Q30KQ4 102 aa4.2□□□□□ -1.74
UBR3-205ENST00000439681 FAM240AA0A1B0GVK7 77 aa4.19□□□□□ -1.74
UBR3-205ENST00000439681 Q6ZVQ6 151 aa4.19□□□□□ -1.74
UBR3-205ENST00000439681 ACYP1P07311 99 aa4.19□□□□□ -1.74
UBR3-205ENST00000439681 RPS28P62857 69 aaKnown RBP4.17□□□□□ -1.74
UBR3-205ENST00000439681 FP248Q71RG6 208 aaPredicted RBP4.17□□□□□ -1.74
UBR3-205ENST00000439681 HMCN2Q8NDA2 5059 aa4.17□□□□□ -1.74
UBR3-205ENST00000439681 IGKV4-1P06312 121 aa4.17□□□□□ -1.74
UBR3-205ENST00000439681 PRR4Q16378 134 aa4.17□□□□□ -1.74
UBR3-205ENST00000439681 UBL5Q9BZL1 73 aa4.17□□□□□ -1.74
UBR3-205ENST00000439681 IGLV7-46A0A075B6I9 117 aa4.16□□□□□ -1.74
UBR3-205ENST00000439681 LORP23490 312 aaPredicted RBP4.16□□□□□ -1.74
UBR3-205ENST00000439681 DSCR10P59022 87 aa4.15□□□□□ -1.75
UBR3-205ENST00000439681 CCDC179H3BU77 68 aa4.14□□□□□ -1.75
UBR3-205ENST00000439681 BPY2O14599 106 aa4.14□□□□□ -1.75
UBR3-205ENST00000439681 IGKV3D-7A0A0C4DH55 119 aa4.13□□□□□ -1.75
UBR3-205ENST00000439681 FAM236DA0A1B0GTK5 79 aa4.13□□□□□ -1.75
UBR3-205ENST00000439681 A8MWP4 228 aa4.13□□□□□ -1.75
UBR3-205ENST00000439681 FAM236CP0DP71 79 aa4.13□□□□□ -1.75
UBR3-205ENST00000439681 KRTAP13-3Q3SY46 172 aa4.13□□□□□ -1.75
UBR3-205ENST00000439681 A0A1B0GVX0 72 aa4.12□□□□□ -1.75
UBR3-205ENST00000439681 NOTCH2NLQ7Z3S9 236 aa4.12□□□□□ -1.75
UBR3-205ENST00000439681 LINC00643Q86TS7 51 aa4.12□□□□□ -1.75
UBR3-205ENST00000439681 PRR15Q8IV56 129 aa4.12□□□□□ -1.75
UBR3-205ENST00000439681 K7EQZ3 153 aa4.11□□□□□ -1.75
UBR3-205ENST00000439681 CXCL6P80162 114 aa4.11□□□□□ -1.75
UBR3-205ENST00000439681 Q8N9L7 120 aa4.11□□□□□ -1.75
UBR3-205ENST00000439681 LPAP08519 4548 aa4.11□□□□□ -1.75
UBR3-205ENST00000439681 IGHV6-1A0A0B4J1U7 121 aa4.1□□□□□ -1.75
UBR3-205ENST00000439681 C9orf92A6NGG3 77 aa4.1□□□□□ -1.75
UBR3-205ENST00000439681 TPRXLQ17RH7 258 aa4.1□□□□□ -1.75
UBR3-205ENST00000439681 NDUFB1O75438 58 aa4.1□□□□□ -1.75
UBR3-205ENST00000439681 LINC00313P59037 77 aa4.09□□□□□ -1.76
UBR3-205ENST00000439681 ATP5EP2Q5VTU8 51 aa4.08□□□□□ -1.76
UBR3-205ENST00000439681 C8orf17Q9NRJ1 99 aa4.08□□□□□ -1.76
UBR3-205ENST00000439681 KRTAP16-1A8MUX0 517 aa4.07□□□□□ -1.76
UBR3-205ENST00000439681 C8orf87E5RJ46 101 aa4.07□□□□□ -1.76
UBR3-205ENST00000439681 MMP24-AS1A0A0U1RRL7 71 aa4.07□□□□□ -1.76
UBR3-205ENST00000439681 LRP2P98164 4655 aa4.07□□□□□ -1.76
UBR3-205ENST00000439681 MT-ATP8P03928 68 aa4.06□□□□□ -1.76
UBR3-205ENST00000439681 PMAIP1Q13794 54 aa4.06□□□□□ -1.76
UBR3-205ENST00000439681 hDV103S1A0JD37 113 aa4.03□□□□□ -1.76
UBR3-205ENST00000439681 A8MUU9 505 aa4.03□□□□□ -1.76
UBR3-205ENST00000439681 HIST1H4AP62805 103 aaKnown RBP4.03□□□□□ -1.76
UBR3-205ENST00000439681 C20orf166-AS1Q96NR2 134 aa4.03□□□□□ -1.76
UBR3-205ENST00000439681 A0A087WVE0 104 aa4.03□□□□□ -1.76
UBR3-205ENST00000439681 FAM236AA0A1B0GUQ0 79 aa4.03□□□□□ -1.76
UBR3-205ENST00000439681 FAM236BA0A1B0GV22 79 aa4.03□□□□□ -1.76
UBR3-205ENST00000439681 HCG22E2RYF7 251 aa4.03□□□□□ -1.76
UBR3-205ENST00000439681 CASC2Q6XLA1 102 aa4.02□□□□□ -1.77
UBR3-205ENST00000439681 WFDC13Q8IUB5 93 aa4.02□□□□□ -1.77
UBR3-205ENST00000439681 Q8N9P0 234 aaPredicted RBP4.02□□□□□ -1.77
UBR3-205ENST00000439681 TMEM254Q8TBM7 123 aa4.02□□□□□ -1.77
UBR3-205ENST00000439681 RPL37P61927 97 aaKnown RBP4.02□□□□□ -1.77
UBR3-205ENST00000439681 Q75L30 129 aa4.02□□□□□ -1.77
UBR3-205ENST00000439681 MRPL34Q9BQ48 92 aaKnown RBP4.02□□□□□ -1.77
UBR3-205ENST00000439681 A0A0U1RQV1 116 aa4.01□□□□□ -1.77
UBR3-205ENST00000439681 IMUPQ9GZP8 106 aa4□□□□□ -1.77
UBR3-205ENST00000439681 UBR4Q5T4S7 5183 aa4□□□□□ -1.77
UBR3-205ENST00000439681 MUC17Q685J3 4493 aa4□□□□□ -1.77
UBR3-205ENST00000439681 PCOTHQ58A44 107 aa3.97□□□□□ -1.77
UBR3-205ENST00000439681 NDUFS5O43920 106 aa3.96□□□□□ -1.78
UBR3-205ENST00000439681 SEC61BP60468 96 aaKnown RBP3.96□□□□□ -1.78
UBR3-205ENST00000439681 TMEM258P61165 79 aa3.96□□□□□ -1.78
UBR3-205ENST00000439681 ATP11AUNQ6ZP68 121 aa3.96□□□□□ -1.78
UBR3-205ENST00000439681 KRTAP19-1Q8IUB9 90 aa3.96□□□□□ -1.78
UBR3-205ENST00000439681 UQCRQO14949 82 aa3.95□□□□□ -1.78
UBR3-205ENST00000439681 ZCCHC13Q8WW36 166 aaKnown RBP3.95□□□□□ -1.78
UBR3-205ENST00000439681 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
UBR3-205ENST00000439681 RNF213Q63HN8 5207 aa3.95□□□□□ -1.78
UBR3-205ENST00000439681 Q5W150 140 aa3.95□□□□□ -1.78
UBR3-205ENST00000439681 BRK1Q8WUW1 75 aa3.94□□□□□ -1.78
UBR3-205ENST00000439681 KRTAP4-1Q9BYQ7 146 aa3.94□□□□□ -1.78
UBR3-205ENST00000439681 TP53AIP1Q9HCN2 124 aa3.93□□□□□ -1.78
UBR3-205ENST00000439681 OCR1Q9BZK8 76 aa3.92□□□□□ -1.78
UBR3-205ENST00000439681 RBM12B-AS1Q9P1G2 102 aa3.92□□□□□ -1.78
UBR3-205ENST00000439681 MUC2Q02817 5179 aa3.91□□□□□ -1.78
UBR3-205ENST00000439681 SPINK7P58062 85 aa3.87□□□□□ -1.79
UBR3-205ENST00000439681 TRAV22A0A0B4J277 110 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms