RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 ATMQ13315 3056 aa12.25□□□□□ -0.45
TOP2B-204ENST00000435706 TACC2O95359 2948 aa12.21□□□□□ -0.45
TOP2B-204ENST00000435706 ITPR2Q14571 2701 aa12.21□□□□□ -0.45
TOP2B-204ENST00000435706 UTP20O75691 2785 aaKnown RBP12.2□□□□□ -0.46
TOP2B-204ENST00000435706 H0YAA0 97 aa12.19□□□□□ -0.46
TOP2B-204ENST00000435706 C10orf95Q9H7T3 257 aa12.16□□□□□ -0.46
TOP2B-204ENST00000435706 HIVEP1P15822 2718 aa12.13□□□□□ -0.47
TOP2B-204ENST00000435706 BOD1L1Q8NFC6 3051 aa12.13□□□□□ -0.47
TOP2B-204ENST00000435706 FLNCQ14315 2725 aa12.11□□□□□ -0.47
TOP2B-204ENST00000435706 FRYLO94915 3013 aa12.09□□□□□ -0.47
TOP2B-204ENST00000435706 COL12A1Q99715 3063 aa12.06□□□□□ -0.48
TOP2B-204ENST00000435706 SZT2Q5T011 3432 aa12.06□□□□□ -0.48
TOP2B-204ENST00000435706 COL6A3P12111 3177 aa12.05□□□□□ -0.48
TOP2B-204ENST00000435706 TNP1P09430 55 aa12.01□□□□□ -0.49
TOP2B-204ENST00000435706 ZZEF1O43149 2961 aa12.01□□□□□ -0.49
TOP2B-204ENST00000435706 NIPBLQ6KC79 2804 aaeCLIP11.96□□□□□ -0.51e-6■□□□□ 11.2
TOP2B-204ENST00000435706 KRTAP1-4P0C5Y4 121 aa11.94□□□□□ -0.5
TOP2B-204ENST00000435706 KMT2BQ9UMN6 2715 aaPredicted RBP11.93□□□□□ -0.5
TOP2B-204ENST00000435706 P0C880 135 aa11.92□□□□□ -0.5
TOP2B-204ENST00000435706 REV3LO60673 3130 aa11.9□□□□□ -0.5
TOP2B-204ENST00000435706 CELSR2Q9HCU4 2923 aa11.9□□□□□ -0.5
TOP2B-204ENST00000435706 PP632Q6XCG6 107 aa11.9□□□□□ -0.5
TOP2B-204ENST00000435706 CFAP47Q6ZTR5 3102 aa11.88□□□□□ -0.51
TOP2B-204ENST00000435706 KRTAP13-3Q3SY46 172 aa11.75□□□□□ -0.53
TOP2B-204ENST00000435706 ZANQ9Y493 2812 aa11.75□□□□□ -0.53
TOP2B-204ENST00000435706 XP32Q5T750 250 aa11.73□□□□□ -0.53
TOP2B-204ENST00000435706 DCHS2Q6V1P9 2916 aa11.73□□□□□ -0.53
TOP2B-204ENST00000435706 HRNRQ86YZ3 2850 aaPredicted RBP11.7□□□□□ -0.54
TOP2B-204ENST00000435706 KRTAP10-8P60410 259 aa11.66□□□□□ -0.54
TOP2B-204ENST00000435706 TNRC18O15417 2968 aaPredicted RBP11.64□□□□□ -0.55
TOP2B-204ENST00000435706 SPEGQ15772 3267 aa11.64□□□□□ -0.55
TOP2B-204ENST00000435706 EYSQ5T1H1 3165 aa11.57□□□□□ -0.56
TOP2B-204ENST00000435706 FBN2P35556 2912 aa11.54□□□□□ -0.56
TOP2B-204ENST00000435706 CRYBG3Q68DQ2 2970 aa11.49□□□□□ -0.57
TOP2B-204ENST00000435706 SPTBN5Q9NRC6 3674 aaKnown RBP11.46□□□□□ -0.57
TOP2B-204ENST00000435706 TGP01266 2768 aa11.46□□□□□ -0.57
TOP2B-204ENST00000435706 DMXL1Q9Y485 3027 aa11.46□□□□□ -0.57
TOP2B-204ENST00000435706 TENM4Q6N022 2769 aa11.44□□□□□ -0.58
TOP2B-204ENST00000435706 USP34Q70CQ2 3546 aa11.43□□□□□ -0.58
TOP2B-204ENST00000435706 NF1P21359 2839 aa11.39□□□□□ -0.59
TOP2B-204ENST00000435706 LOC400499M0QZD8 3231 aa11.35□□□□□ -0.59
TOP2B-204ENST00000435706 KRTAP12-2P59991 146 aa11.34□□□□□ -0.59
TOP2B-204ENST00000435706 A0A1B0GVY2 172 aa11.34□□□□□ -0.59
TOP2B-204ENST00000435706 TPRXLQ17RH7 258 aa11.31□□□□□ -0.6
TOP2B-204ENST00000435706 CELSR1Q9NYQ6 3014 aa11.17□□□□□ -0.62
TOP2B-204ENST00000435706 TENM3Q9P273 2699 aa11.17□□□□□ -0.62
TOP2B-204ENST00000435706 MXRA5Q9NR99 2828 aa11.14□□□□□ -0.63
TOP2B-204ENST00000435706 KRTAP12-1P59990 96 aa11.13□□□□□ -0.63
TOP2B-204ENST00000435706 MYO15AQ9UKN7 3530 aa11.11□□□□□ -0.63
TOP2B-204ENST00000435706 KRTAP3-1Q9BYR8 98 aa11.1□□□□□ -0.63
TOP2B-204ENST00000435706 TENM1Q9UKZ4 2725 aa11.1□□□□□ -0.63
TOP2B-204ENST00000435706 KRTAP13-4Q3LI77 160 aa11.03□□□□□ -0.64
TOP2B-204ENST00000435706 KRTAP21-3Q3LHN1 58 aa11□□□□□ -0.65
TOP2B-204ENST00000435706 KRTAP10-10P60014 251 aa10.97□□□□□ -0.65
TOP2B-204ENST00000435706 WDFY3Q8IZQ1 3526 aa10.95□□□□□ -0.66
TOP2B-204ENST00000435706 PDZD2O15018 2839 aa10.91□□□□□ -0.66
TOP2B-204ENST00000435706 TENM2Q9NT68 2774 aa10.9□□□□□ -0.67
TOP2B-204ENST00000435706 DCHS1Q96JQ0 3298 aa10.87□□□□□ -0.67
TOP2B-204ENST00000435706 KRTAP10-6P60371 365 aaPredicted RBP10.85□□□□□ -0.67
TOP2B-204ENST00000435706 PRO2289Q9P1D8 64 aa10.85□□□□□ -0.67
TOP2B-204ENST00000435706 RELNP78509 3460 aa10.84□□□□□ -0.67
TOP2B-204ENST00000435706 ZFHX4Q86UP3 3567 aa10.78□□□□□ -0.68
TOP2B-204ENST00000435706 CSMD1Q96PZ7 3565 aa10.75□□□□□ -0.69
TOP2B-204ENST00000435706 KRTAP15-1Q3LI76 137 aa10.7□□□□□ -0.7
TOP2B-204ENST00000435706 PKD1L1Q8TDX9 2849 aa10.64□□□□□ -0.71
TOP2B-204ENST00000435706 ASPMQ8IZT6 3477 aa10.6□□□□□ -0.71
TOP2B-204ENST00000435706 VWFP04275 2813 aa10.57□□□□□ -0.72
TOP2B-204ENST00000435706 SMG1Q96Q15 3661 aaKnown RBP10.48□□□□□ -0.73
TOP2B-204ENST00000435706 KRTAP3-2Q9BYR7 98 aa10.46□□□□□ -0.74
TOP2B-204ENST00000435706 LAMA5O15230 3695 aa10.41□□□□□ -0.74
TOP2B-204ENST00000435706 KRTAP3-3Q9BYR6 98 aa10.38□□□□□ -0.75
TOP2B-204ENST00000435706 FBN3Q75N90 2809 aa10.38□□□□□ -0.75
TOP2B-204ENST00000435706 FBN1P35555 2871 aaKnown RBP10.36□□□□□ -0.75
TOP2B-204ENST00000435706 MEGF8Q7Z7M0 2845 aa10.29□□□□□ -0.76
TOP2B-204ENST00000435706 INE1O15225 51 aa10.28□□□□□ -0.76
TOP2B-204ENST00000435706 SRRM2Q9UQ35 2752 aaKnown RBP10.27□□□□□ -0.77
TOP2B-204ENST00000435706 SVEP1Q4LDE5 3571 aa10.24□□□□□ -0.77
TOP2B-204ENST00000435706 NBPF19A0A087WUL8 3843 aa10.17□□□□□ -0.78
TOP2B-204ENST00000435706 ANK3Q12955 4377 aaKnown RBP10.15□□□□□ -0.78
TOP2B-204ENST00000435706 OTOGQ6ZRI0 2925 aa10.1□□□□□ -0.79
TOP2B-204ENST00000435706 CUBNO60494 3623 aa10.07□□□□□ -0.8
TOP2B-204ENST00000435706 DMDP11532 3685 aa10.05□□□□□ -0.8
TOP2B-204ENST00000435706 COL7A1Q02388 2944 aa9.94□□□□□ -0.82
TOP2B-204ENST00000435706 MT1HL1P0DM35 61 aa9.94□□□□□ -0.82
TOP2B-204ENST00000435706 TRRAPQ9Y4A5 3859 aa9.87□□□□□ -0.83
TOP2B-204ENST00000435706 KRTAP10-12P60413 245 aa9.83□□□□□ -0.84
TOP2B-204ENST00000435706 KRTAP23-1A1A580 65 aa9.82□□□□□ -0.84
TOP2B-204ENST00000435706 ZFHX3Q15911 3703 aa9.82□□□□□ -0.84
TOP2B-204ENST00000435706 KRTAP10-4P60372 401 aaPredicted RBP9.81□□□□□ -0.84
TOP2B-204ENST00000435706 SPENQ96T58 3664 aaKnown RBP9.81□□□□□ -0.84
TOP2B-204ENST00000435706 MUC3AQ02505 3323 aa9.8□□□□□ -0.84
TOP2B-204ENST00000435706 CSMD2Q7Z408 3487 aa9.8□□□□□ -0.84
TOP2B-204ENST00000435706 HUWE1Q7Z6Z7 4374 aaKnown RBP9.7□□□□□ -0.86
TOP2B-204ENST00000435706 KRTAP12-3P60328 96 aa9.69□□□□□ -0.86
TOP2B-204ENST00000435706 LORP23490 312 aaPredicted RBP9.66□□□□□ -0.86
TOP2B-204ENST00000435706 LCE3AQ5TA76 89 aa9.65□□□□□ -0.86
TOP2B-204ENST00000435706 BSNQ9UPA5 3926 aa9.51□□□□□ -0.89
TOP2B-204ENST00000435706 VPS13CQ709C8 3753 aa9.49□□□□□ -0.89
TOP2B-204ENST00000435706 CRCT1Q9UGL9 99 aa9.45□□□□□ -0.9
TOP2B-204ENST00000435706 KRTAP4-5Q9BYR2 181 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms