RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 KRTAP13-2Q52LG2 175 aa6.91□□□□□ -1.3
UBE3B-203ENST00000434735 KALRNO60229 2985 aa6.9□□□□□ -1.31
UBE3B-203ENST00000434735 TENM1Q9UKZ4 2725 aa6.89□□□□□ -1.31
UBE3B-203ENST00000434735 Q5VV11 94 aa6.89□□□□□ -1.31
UBE3B-203ENST00000434735 RPS29P62273 56 aaKnown RBP6.88□□□□□ -1.31
UBE3B-203ENST00000434735 A0A1B0GVY2 172 aa6.87□□□□□ -1.31
UBE3B-203ENST00000434735 TENM3Q9P273 2699 aa6.87□□□□□ -1.31
UBE3B-203ENST00000434735 DMXL1Q9Y485 3027 aa6.86□□□□□ -1.31
UBE3B-203ENST00000434735 SPATA8Q6RVD6 105 aa6.86□□□□□ -1.31
UBE3B-203ENST00000434735 ASH1LQ9NR48 2969 aaKnown RBP6.86□□□□□ -1.31
UBE3B-203ENST00000434735 DCHS2Q6V1P9 2916 aa6.86□□□□□ -1.31
UBE3B-203ENST00000434735 DNAH14Q0VDD8 3507 aa6.84□□□□□ -1.31
UBE3B-203ENST00000434735 ADGRG4Q8IZF6 3080 aa6.83□□□□□ -1.32
UBE3B-203ENST00000434735 SPEGQ15772 3267 aa6.82□□□□□ -1.32
UBE3B-203ENST00000434735 A8MUU9 505 aa6.82□□□□□ -1.32
UBE3B-203ENST00000434735 NF1P21359 2839 aa6.82□□□□□ -1.32
UBE3B-203ENST00000434735 USP34Q70CQ2 3546 aa6.81□□□□□ -1.32
UBE3B-203ENST00000434735 KRTAP4-16G5E9R7 235 aaPredicted RBP6.81□□□□□ -1.32
UBE3B-203ENST00000434735 PKD1L1Q8TDX9 2849 aa6.8□□□□□ -1.32
UBE3B-203ENST00000434735 NOTCH2NLQ7Z3S9 236 aa6.78□□□□□ -1.32
UBE3B-203ENST00000434735 ASB16-AS1Q495Z4 193 aa6.74□□□□□ -1.33
UBE3B-203ENST00000434735 H3BS24 57 aa6.74□□□□□ -1.33
UBE3B-203ENST00000434735 Q5XG85 94 aa6.74□□□□□ -1.33
UBE3B-203ENST00000434735 KRTAP10-10P60014 251 aa6.73□□□□□ -1.33
UBE3B-203ENST00000434735 KRTAP7-1Q8IUC3 87 aa6.73□□□□□ -1.33
UBE3B-203ENST00000434735 ZANQ9Y493 2812 aa6.72□□□□□ -1.33
UBE3B-203ENST00000434735 KRTAP29-1A8MX34 341 aaPredicted RBP6.71□□□□□ -1.34
UBE3B-203ENST00000434735 CYSTM1Q9H1C7 97 aa6.7□□□□□ -1.34
UBE3B-203ENST00000434735 SPTBN5Q9NRC6 3674 aaKnown RBP6.7□□□□□ -1.34
UBE3B-203ENST00000434735 TNP1P09430 55 aa6.68□□□□□ -1.34
UBE3B-203ENST00000434735 XP32Q5T750 250 aa6.68□□□□□ -1.34
UBE3B-203ENST00000434735 KRTAP13-1Q8IUC0 172 aa6.65□□□□□ -1.34
UBE3B-203ENST00000434735 MYO15AQ9UKN7 3530 aa6.65□□□□□ -1.34
UBE3B-203ENST00000434735 TPRXLQ17RH7 258 aa6.64□□□□□ -1.35
UBE3B-203ENST00000434735 KRTAP10-8P60410 259 aa6.63□□□□□ -1.35
UBE3B-203ENST00000434735 VWFP04275 2813 aa6.62□□□□□ -1.35
UBE3B-203ENST00000434735 MXRA5Q9NR99 2828 aa6.62□□□□□ -1.35
UBE3B-203ENST00000434735 A8MU10 97 aa6.6□□□□□ -1.35
UBE3B-203ENST00000434735 KRTAP1-4P0C5Y4 121 aa6.58□□□□□ -1.36
UBE3B-203ENST00000434735 DCHS1Q96JQ0 3298 aa6.55□□□□□ -1.36
UBE3B-203ENST00000434735 KRTAP16-1A8MUX0 517 aa6.54□□□□□ -1.36
UBE3B-203ENST00000434735 KRTAP25-1Q3LHN0 102 aa6.52□□□□□ -1.37
UBE3B-203ENST00000434735 C10orf95Q9H7T3 257 aa6.49□□□□□ -1.37
UBE3B-203ENST00000434735 FBN2P35556 2912 aa6.49□□□□□ -1.37
UBE3B-203ENST00000434735 ZFHX3Q15911 3703 aa6.46□□□□□ -1.38
UBE3B-203ENST00000434735 NBPF19A0A087WUL8 3843 aa6.45□□□□□ -1.38
UBE3B-203ENST00000434735 CELSR1Q9NYQ6 3014 aa6.45□□□□□ -1.38
UBE3B-203ENST00000434735 PRO2289Q9P1D8 64 aa6.45□□□□□ -1.38
UBE3B-203ENST00000434735 KRTAP13-3Q3SY46 172 aa6.44□□□□□ -1.38
UBE3B-203ENST00000434735 WDFY3Q8IZQ1 3526 aa6.43□□□□□ -1.38
UBE3B-203ENST00000434735 LOC400499M0QZD8 3231 aa6.43□□□□□ -1.38
UBE3B-203ENST00000434735 SRRM2Q9UQ35 2752 aaKnown RBP6.42□□□□□ -1.38
UBE3B-203ENST00000434735 PDZD2O15018 2839 aa6.41□□□□□ -1.38
UBE3B-203ENST00000434735 HRNRQ86YZ3 2850 aaPredicted RBP6.41□□□□□ -1.38
UBE3B-203ENST00000434735 PP632Q6XCG6 107 aa6.4□□□□□ -1.39
UBE3B-203ENST00000434735 NDUFAF8A1L188 74 aa6.37□□□□□ -1.39
UBE3B-203ENST00000434735 DMDP11532 3685 aa6.37□□□□□ -1.39
UBE3B-203ENST00000434735 TGP01266 2768 aa6.36□□□□□ -1.39
UBE3B-203ENST00000434735 RELNP78509 3460 aa6.35□□□□□ -1.39
UBE3B-203ENST00000434735 A6NN06 94 aa6.33□□□□□ -1.4
UBE3B-203ENST00000434735 FBN3Q75N90 2809 aa6.28□□□□□ -1.4
UBE3B-203ENST00000434735 OTOGQ6ZRI0 2925 aa6.28□□□□□ -1.4
UBE3B-203ENST00000434735 FBN1P35555 2871 aaKnown RBP6.26□□□□□ -1.41
UBE3B-203ENST00000434735 MUC3AQ02505 3323 aa6.24□□□□□ -1.41
UBE3B-203ENST00000434735 ASPMQ8IZT6 3477 aa6.23□□□□□ -1.41
UBE3B-203ENST00000434735 KRTAP4-5Q9BYR2 181 aa6.15□□□□□ -1.42
UBE3B-203ENST00000434735 LAMA5O15230 3695 aa6.14□□□□□ -1.43
UBE3B-203ENST00000434735 P0C880 135 aa6.14□□□□□ -1.43
UBE3B-203ENST00000434735 ZFHX4Q86UP3 3567 aa6.07□□□□□ -1.44
UBE3B-203ENST00000434735 SPENQ96T58 3664 aaKnown RBP6.07□□□□□ -1.44
UBE3B-203ENST00000434735 H0YAA0 97 aa6.01□□□□□ -1.45
UBE3B-203ENST00000434735 SMG1Q96Q15 3661 aaKnown RBP5.97□□□□□ -1.45
UBE3B-203ENST00000434735 CSMD2Q7Z408 3487 aa5.96□□□□□ -1.46
UBE3B-203ENST00000434735 MT1HL1P0DM35 61 aa5.94□□□□□ -1.46
UBE3B-203ENST00000434735 CSMD1Q96PZ7 3565 aa5.94□□□□□ -1.46
UBE3B-203ENST00000434735 COL7A1Q02388 2944 aa5.91□□□□□ -1.46
UBE3B-203ENST00000434735 ANK3Q12955 4377 aaKnown RBP5.87□□□□□ -1.47
UBE3B-203ENST00000434735 BSNQ9UPA5 3926 aa5.84□□□□□ -1.48
UBE3B-203ENST00000434735 KRTAP12-2P59991 146 aa5.77□□□□□ -1.49
UBE3B-203ENST00000434735 KRTAP13-4Q3LI77 160 aa5.76□□□□□ -1.49
UBE3B-203ENST00000434735 TRRAPQ9Y4A5 3859 aa5.74□□□□□ -1.49
UBE3B-203ENST00000434735 SVEP1Q4LDE5 3571 aa5.73□□□□□ -1.49
UBE3B-203ENST00000434735 CRCT1Q9UGL9 99 aa5.71□□□□□ -1.49
UBE3B-203ENST00000434735 MEGF8Q7Z7M0 2845 aa5.71□□□□□ -1.5
UBE3B-203ENST00000434735 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
UBE3B-203ENST00000434735 LORP23490 312 aaPredicted RBP5.68□□□□□ -1.5
UBE3B-203ENST00000434735 KRTAP12-1P59990 96 aa5.61□□□□□ -1.51
UBE3B-203ENST00000434735 VPS13CQ709C8 3753 aa5.59□□□□□ -1.51
UBE3B-203ENST00000434735 KRTAP10-4P60372 401 aaPredicted RBP5.59□□□□□ -1.51
UBE3B-203ENST00000434735 CUBNO60494 3623 aa5.55□□□□□ -1.52
UBE3B-203ENST00000434735 KRTAP3-1Q9BYR8 98 aa5.51□□□□□ -1.53
UBE3B-203ENST00000434735 DNHD1Q96M86 4753 aa5.51□□□□□ -1.53
UBE3B-203ENST00000434735 HUWE1Q7Z6Z7 4374 aaKnown RBP5.51□□□□□ -1.53
UBE3B-203ENST00000434735 ALMS1Q8TCU4 4167 aa5.5□□□□□ -1.53
UBE3B-203ENST00000434735 KRTAP10-12P60413 245 aa5.45□□□□□ -1.54
UBE3B-203ENST00000434735 KRTAP8-1Q8IUC2 63 aa5.43□□□□□ -1.54
UBE3B-203ENST00000434735 KRTAP10-6P60371 365 aaPredicted RBP5.31□□□□□ -1.56
UBE3B-203ENST00000434735 DNAH5Q8TE73 4624 aa5.3□□□□□ -1.56
UBE3B-203ENST00000434735 MT1HP80294 61 aa5.27□□□□□ -1.57
UBE3B-203ENST00000434735 DNAH9Q9NYC9 4486 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms