RNA–Protein interactions for RNA: ENST00000434452.5

DSC3-202, Transcript of desmocollin 3, humanhuman

TSL 5 BASIC

Gene DSC3, Length 6,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-202ENST00000434452 CHD7Q9P2D1 2997 aa4.84□□□□□ -1.63
DSC3-202ENST00000434452 NBEAL2Q6ZNJ1 2754 aa4.83□□□□□ -1.64
DSC3-202ENST00000434452 SPENQ96T58 3664 aaKnown RBP4.83□□□□□ -1.64
DSC3-202ENST00000434452 FLNCQ14315 2725 aa4.83□□□□□ -1.64
DSC3-202ENST00000434452 ZNF292O60281 2723 aa4.82□□□□□ -1.64
DSC3-202ENST00000434452 WDFY4Q6ZS81 3184 aa4.82□□□□□ -1.64
DSC3-202ENST00000434452 ZFHX4Q86UP3 3567 aa4.8□□□□□ -1.64
DSC3-202ENST00000434452 CHD9Q3L8U1 2897 aa4.8□□□□□ -1.64
DSC3-202ENST00000434452 LAMA1P25391 3075 aa4.79□□□□□ -1.64
DSC3-202ENST00000434452 ITPR1Q14643 2758 aa4.77□□□□□ -1.65
DSC3-202ENST00000434452 VPS13AQ96RL7 3174 aa4.76□□□□□ -1.65
DSC3-202ENST00000434452 ITPR2Q14571 2701 aa4.76□□□□□ -1.65
DSC3-202ENST00000434452 UBR5O95071 2799 aaPredicted RBP4.76□□□□□ -1.65
DSC3-202ENST00000434452 NBEAQ8NFP9 2946 aa4.75□□□□□ -1.65
DSC3-202ENST00000434452 TENM4Q6N022 2769 aa4.75□□□□□ -1.65
DSC3-202ENST00000434452 ASPMQ8IZT6 3477 aa4.75□□□□□ -1.65
DSC3-202ENST00000434452 FRYQ5TBA9 3013 aa4.75□□□□□ -1.65
DSC3-202ENST00000434452 KRTAP13-1Q8IUC0 172 aa4.75□□□□□ -1.65
DSC3-202ENST00000434452 KRTAP12-2P59991 146 aa4.74□□□□□ -1.65
DSC3-202ENST00000434452 KRTAP7-1Q8IUC3 87 aa4.73□□□□□ -1.65
DSC3-202ENST00000434452 BSNQ9UPA5 3926 aa4.73□□□□□ -1.65
DSC3-202ENST00000434452 CRYBG3Q68DQ2 2970 aa4.72□□□□□ -1.65
DSC3-202ENST00000434452 TRIOO75962 3097 aa4.72□□□□□ -1.65
DSC3-202ENST00000434452 TRANK1O15050 2925 aa4.72□□□□□ -1.65
DSC3-202ENST00000434452 FREM2Q5SZK8 3169 aa4.71□□□□□ -1.65
DSC3-202ENST00000434452 MGAQ8IWI9 3026 aa4.71□□□□□ -1.66
DSC3-202ENST00000434452 H0YAA0 97 aa4.7□□□□□ -1.66
DSC3-202ENST00000434452 UTP20O75691 2785 aaKnown RBP4.7□□□□□ -1.66
DSC3-202ENST00000434452 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
DSC3-202ENST00000434452 KRTAP13-3Q3SY46 172 aa4.69□□□□□ -1.66
DSC3-202ENST00000434452 KRTAP1-4P0C5Y4 121 aa4.66□□□□□ -1.66
DSC3-202ENST00000434452 DSPP15924 2871 aaKnown RBP4.66□□□□□ -1.66
DSC3-202ENST00000434452 ZFHX3Q15911 3703 aa4.65□□□□□ -1.66
DSC3-202ENST00000434452 FRYLO94915 3013 aa4.65□□□□□ -1.67
DSC3-202ENST00000434452 LAMA5O15230 3695 aa4.63□□□□□ -1.67
DSC3-202ENST00000434452 CELSR3Q9NYQ7 3312 aa4.6□□□□□ -1.67
DSC3-202ENST00000434452 ASH1LQ9NR48 2969 aaKnown RBP4.58□□□□□ -1.68
DSC3-202ENST00000434452 TENM3Q9P273 2699 aa4.58□□□□□ -1.68
DSC3-202ENST00000434452 NIPBLQ6KC79 2804 aaeCLIP4.57□□□□□ -1.68
DSC3-202ENST00000434452 KALRNO60229 2985 aa4.56□□□□□ -1.68
DSC3-202ENST00000434452 HIVEP1P15822 2718 aa4.56□□□□□ -1.68
DSC3-202ENST00000434452 LRBAP50851 2863 aa4.53□□□□□ -1.68
DSC3-202ENST00000434452 CFAP47Q6ZTR5 3102 aa4.53□□□□□ -1.68
DSC3-202ENST00000434452 TENM1Q9UKZ4 2725 aa4.52□□□□□ -1.69
DSC3-202ENST00000434452 VPS13CQ709C8 3753 aa4.51□□□□□ -1.69
DSC3-202ENST00000434452 DMXL2Q8TDJ6 3036 aa4.51□□□□□ -1.69
DSC3-202ENST00000434452 TACC2O95359 2948 aa4.51□□□□□ -1.69
DSC3-202ENST00000434452 DCHS1Q96JQ0 3298 aa4.5□□□□□ -1.69
DSC3-202ENST00000434452 KRTAP13-4Q3LI77 160 aa4.48□□□□□ -1.69
DSC3-202ENST00000434452 TENM2Q9NT68 2774 aa4.48□□□□□ -1.69
DSC3-202ENST00000434452 SMG1Q96Q15 3661 aaKnown RBP4.47□□□□□ -1.69
DSC3-202ENST00000434452 APCP25054 2843 aa4.47□□□□□ -1.69
DSC3-202ENST00000434452 KRTAP10-6P60371 365 aaPredicted RBP4.46□□□□□ -1.69
DSC3-202ENST00000434452 LOC400499M0QZD8 3231 aa4.46□□□□□ -1.7
DSC3-202ENST00000434452 ADGRG4Q8IZF6 3080 aa4.44□□□□□ -1.7
DSC3-202ENST00000434452 LORP23490 312 aaPredicted RBP4.43□□□□□ -1.7
DSC3-202ENST00000434452 DMXL1Q9Y485 3027 aa4.43□□□□□ -1.7
DSC3-202ENST00000434452 CELSR2Q9HCU4 2923 aa4.42□□□□□ -1.7
DSC3-202ENST00000434452 ATMQ13315 3056 aa4.42□□□□□ -1.7
DSC3-202ENST00000434452 RELNP78509 3460 aa4.41□□□□□ -1.7
DSC3-202ENST00000434452 ZANQ9Y493 2812 aa4.39□□□□□ -1.71
DSC3-202ENST00000434452 PDZD2O15018 2839 aa4.38□□□□□ -1.71
DSC3-202ENST00000434452 NBPF19A0A087WUL8 3843 aa4.36□□□□□ -1.71
DSC3-202ENST00000434452 COL12A1Q99715 3063 aa4.33□□□□□ -1.72
DSC3-202ENST00000434452 DCHS2Q6V1P9 2916 aa4.33□□□□□ -1.72
DSC3-202ENST00000434452 KRTAP10-12P60413 245 aa4.33□□□□□ -1.72
DSC3-202ENST00000434452 NF1P21359 2839 aa4.32□□□□□ -1.72
DSC3-202ENST00000434452 FBN3Q75N90 2809 aa4.32□□□□□ -1.72
DSC3-202ENST00000434452 ZZEF1O43149 2961 aa4.32□□□□□ -1.72
DSC3-202ENST00000434452 CSMD1Q96PZ7 3565 aa4.31□□□□□ -1.72
DSC3-202ENST00000434452 BOD1L1Q8NFC6 3051 aa4.3□□□□□ -1.72
DSC3-202ENST00000434452 CSMD2Q7Z408 3487 aa4.29□□□□□ -1.72
DSC3-202ENST00000434452 KRTAP10-5P60370 271 aa4.28□□□□□ -1.72
DSC3-202ENST00000434452 KRTAP12-1P59990 96 aa4.28□□□□□ -1.72
DSC3-202ENST00000434452 PKD1L1Q8TDX9 2849 aa4.27□□□□□ -1.73
DSC3-202ENST00000434452 SVEP1Q4LDE5 3571 aa4.26□□□□□ -1.73
DSC3-202ENST00000434452 KRTAP8-1Q8IUC2 63 aa4.25□□□□□ -1.73
DSC3-202ENST00000434452 FBN2P35556 2912 aa4.23□□□□□ -1.73
DSC3-202ENST00000434452 TGP01266 2768 aa4.23□□□□□ -1.73
DSC3-202ENST00000434452 CUBNO60494 3623 aa4.23□□□□□ -1.73
DSC3-202ENST00000434452 ZNF469Q96JG9 3925 aaPredicted RBP4.21□□□□□ -1.74
DSC3-202ENST00000434452 AKAP9Q99996 3911 aa4.2□□□□□ -1.74
DSC3-202ENST00000434452 VWFP04275 2813 aa4.2□□□□□ -1.74
DSC3-202ENST00000434452 SRRM2Q9UQ35 2752 aaKnown RBP4.18□□□□□ -1.74
DSC3-202ENST00000434452 HRNRQ86YZ3 2850 aaPredicted RBP4.17□□□□□ -1.74
DSC3-202ENST00000434452 MXRA5Q9NR99 2828 aa4.15□□□□□ -1.74
DSC3-202ENST00000434452 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
DSC3-202ENST00000434452 INE1O15225 51 aa4.13□□□□□ -1.75
DSC3-202ENST00000434452 KRTAP10-7P60409 375 aaPredicted RBP4.1□□□□□ -1.75
DSC3-202ENST00000434452 CELSR1Q9NYQ6 3014 aa4.04□□□□□ -1.76
DSC3-202ENST00000434452 CMYA5Q8N3K9 4069 aa4.03□□□□□ -1.76
DSC3-202ENST00000434452 KRTAP4-5Q9BYR2 181 aa4.02□□□□□ -1.77
DSC3-202ENST00000434452 LCE3AQ5TA76 89 aa3.99□□□□□ -1.77
DSC3-202ENST00000434452 SPRR2FQ96RM1 72 aa3.99□□□□□ -1.77
DSC3-202ENST00000434452 KRTAP3-1Q9BYR8 98 aa3.99□□□□□ -1.77
DSC3-202ENST00000434452 MT1HL1P0DM35 61 aa3.95□□□□□ -1.78
DSC3-202ENST00000434452 ANK2Q01484 3957 aa3.92□□□□□ -1.78
DSC3-202ENST00000434452 FBN1P35555 2871 aaKnown RBP3.85□□□□□ -1.79
DSC3-202ENST00000434452 ANK3Q12955 4377 aaKnown RBP3.84□□□□□ -1.79
DSC3-202ENST00000434452 CSMD3Q7Z407 3707 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms