RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 TRIOO75962 3097 aa2.25□□□□□ -2.05
LRRK2-204ENST00000430804 TENM2Q9NT68 2774 aa2.25□□□□□ -2.05
LRRK2-204ENST00000430804 C5orf42Q9H799 3197 aa2.25□□□□□ -2.05
LRRK2-204ENST00000430804 H0YAA0 97 aa2.23□□□□□ -2.05
LRRK2-204ENST00000430804 SPTBN5Q9NRC6 3674 aaKnown RBP2.22□□□□□ -2.05
LRRK2-204ENST00000430804 ITPR1Q14643 2758 aa2.21□□□□□ -2.06
LRRK2-204ENST00000430804 FBN3Q75N90 2809 aa2.21□□□□□ -2.06
LRRK2-204ENST00000430804 TENM3Q9P273 2699 aa2.2□□□□□ -2.06
LRRK2-204ENST00000430804 PRAC1Q96KF2 57 aa2.18□□□□□ -2.06
LRRK2-204ENST00000430804 VPS13AQ96RL7 3174 aa2.18□□□□□ -2.06
LRRK2-204ENST00000430804 WDFY4Q6ZS81 3184 aa2.18□□□□□ -2.06
LRRK2-204ENST00000430804 PRRC2CQ9Y520 2896 aaKnown RBP2.18□□□□□ -2.06
LRRK2-204ENST00000430804 TENM1Q9UKZ4 2725 aa2.17□□□□□ -2.06
LRRK2-204ENST00000430804 FRYLO94915 3013 aa2.17□□□□□ -2.06
LRRK2-204ENST00000430804 LORP23490 312 aaPredicted RBP2.17□□□□□ -2.06
LRRK2-204ENST00000430804 KRTAP16-1A8MUX0 517 aa2.16□□□□□ -2.06
LRRK2-204ENST00000430804 KRTAP15-1Q3LI76 137 aa2.15□□□□□ -2.07
LRRK2-204ENST00000430804 LAMA1P25391 3075 aa2.15□□□□□ -2.07
LRRK2-204ENST00000430804 KRTAP8-1Q8IUC2 63 aa2.14□□□□□ -2.07
LRRK2-204ENST00000430804 USP34Q70CQ2 3546 aa2.14□□□□□ -2.07
LRRK2-204ENST00000430804 MT1HL1P0DM35 61 aa2.14□□□□□ -2.07
LRRK2-204ENST00000430804 DMDP11532 3685 aa2.13□□□□□ -2.07
LRRK2-204ENST00000430804 MYO15AQ9UKN7 3530 aa2.13□□□□□ -2.07
LRRK2-204ENST00000430804 SPEGQ15772 3267 aa2.13□□□□□ -2.07
LRRK2-204ENST00000430804 DSPP15924 2871 aaKnown RBP2.13□□□□□ -2.07
LRRK2-204ENST00000430804 DNAH14Q0VDD8 3507 aa2.12□□□□□ -2.07
LRRK2-204ENST00000430804 CYSTM1Q9H1C7 97 aa2.12□□□□□ -2.07
LRRK2-204ENST00000430804 CRCT1Q9UGL9 99 aa2.12□□□□□ -2.07
LRRK2-204ENST00000430804 CRYBG3Q68DQ2 2970 aa2.12□□□□□ -2.07
LRRK2-204ENST00000430804 NIPBLQ6KC79 2804 aaeCLIP2.11□□□□□ -2.07
LRRK2-204ENST00000430804 KRTAP13-4Q3LI77 160 aa2.11□□□□□ -2.07
LRRK2-204ENST00000430804 FRYQ5TBA9 3013 aa2.1□□□□□ -2.07
LRRK2-204ENST00000430804 CFAP54Q96N23 3096 aa2.1□□□□□ -2.07
LRRK2-204ENST00000430804 KRTAP12-2P59991 146 aa2.1□□□□□ -2.07
LRRK2-204ENST00000430804 KRTAP10-12P60413 245 aa2.09□□□□□ -2.07
LRRK2-204ENST00000430804 KRTAP4-5Q9BYR2 181 aa2.09□□□□□ -2.07
LRRK2-204ENST00000430804 DMXL1Q9Y485 3027 aa2.09□□□□□ -2.07
LRRK2-204ENST00000430804 DCHS1Q96JQ0 3298 aa2.09□□□□□ -2.08
LRRK2-204ENST00000430804 NBEAL2Q6ZNJ1 2754 aa2.08□□□□□ -2.08
LRRK2-204ENST00000430804 ASH1LQ9NR48 2969 aaKnown RBP2.08□□□□□ -2.08
LRRK2-204ENST00000430804 APCP25054 2843 aa2.08□□□□□ -2.08
LRRK2-204ENST00000430804 WDFY3Q8IZQ1 3526 aa2.07□□□□□ -2.08
LRRK2-204ENST00000430804 KRTAP10-6P60371 365 aaPredicted RBP2.06□□□□□ -2.08
LRRK2-204ENST00000430804 FREM2Q5SZK8 3169 aa2.06□□□□□ -2.08
LRRK2-204ENST00000430804 CELSR3Q9NYQ7 3312 aa2.04□□□□□ -2.08
LRRK2-204ENST00000430804 ASPMQ8IZT6 3477 aa2.04□□□□□ -2.08
LRRK2-204ENST00000430804 CFAP47Q6ZTR5 3102 aa2.04□□□□□ -2.08
LRRK2-204ENST00000430804 KRTAP10-7P60409 375 aaPredicted RBP2.03□□□□□ -2.08
LRRK2-204ENST00000430804 MGAQ8IWI9 3026 aa2.03□□□□□ -2.08
LRRK2-204ENST00000430804 ZZEF1O43149 2961 aa2.03□□□□□ -2.08
LRRK2-204ENST00000430804 NDUFAF8A1L188 74 aa2.02□□□□□ -2.09
LRRK2-204ENST00000430804 LOC400499M0QZD8 3231 aa2.02□□□□□ -2.09
LRRK2-204ENST00000430804 DMXL2Q8TDJ6 3036 aa2.01□□□□□ -2.09
LRRK2-204ENST00000430804 LAMA5O15230 3695 aa2.01□□□□□ -2.09
LRRK2-204ENST00000430804 KALRNO60229 2985 aa2.01□□□□□ -2.09
LRRK2-204ENST00000430804 ZFHX4Q86UP3 3567 aa2.01□□□□□ -2.09
LRRK2-204ENST00000430804 SPRR2FQ96RM1 72 aa2□□□□□ -2.09
LRRK2-204ENST00000430804 NF1P21359 2839 aa1.99□□□□□ -2.09
LRRK2-204ENST00000430804 BOD1L1Q8NFC6 3051 aa1.99□□□□□ -2.09
LRRK2-204ENST00000430804 ATMQ13315 3056 aa1.99□□□□□ -2.09
LRRK2-204ENST00000430804 NBEAQ8NFP9 2946 aa1.98□□□□□ -2.09
LRRK2-204ENST00000430804 PKD1L1Q8TDX9 2849 aa1.97□□□□□ -2.09
LRRK2-204ENST00000430804 H3BS24 57 aa1.97□□□□□ -2.09
LRRK2-204ENST00000430804 SPRR2EP22531 72 aa1.97□□□□□ -2.09
LRRK2-204ENST00000430804 SPRR2BP35325 72 aa1.97□□□□□ -2.09
LRRK2-204ENST00000430804 SPRR2AP35326 72 aa1.97□□□□□ -2.09
LRRK2-204ENST00000430804 KRTAP10-4P60372 401 aaPredicted RBP1.96□□□□□ -2.09
LRRK2-204ENST00000430804 LRBAP50851 2863 aa1.96□□□□□ -2.1
LRRK2-204ENST00000430804 KRTAP12-3P60328 96 aa1.95□□□□□ -2.1
LRRK2-204ENST00000430804 PDZD2O15018 2839 aa1.95□□□□□ -2.1
LRRK2-204ENST00000430804 TACC2O95359 2948 aa1.95□□□□□ -2.1
LRRK2-204ENST00000430804 MXRA5Q9NR99 2828 aa1.95□□□□□ -2.1
LRRK2-204ENST00000430804 SMG1Q96Q15 3661 aaKnown RBP1.95□□□□□ -2.1
LRRK2-204ENST00000430804 SPENQ96T58 3664 aaKnown RBP1.95□□□□□ -2.1
LRRK2-204ENST00000430804 KRTAP12-1P59990 96 aa1.95□□□□□ -2.1
LRRK2-204ENST00000430804 FBN2P35556 2912 aa1.94□□□□□ -2.1
LRRK2-204ENST00000430804 SPRR2DP22532 72 aa1.93□□□□□ -2.1
LRRK2-204ENST00000430804 COL12A1Q99715 3063 aa1.93□□□□□ -2.1
LRRK2-204ENST00000430804 BSNQ9UPA5 3926 aa1.93□□□□□ -2.1
LRRK2-204ENST00000430804 RELNP78509 3460 aa1.92□□□□□ -2.1
LRRK2-204ENST00000430804 MT1HP80294 61 aa1.92□□□□□ -2.1
LRRK2-204ENST00000430804 KRTAP19-4Q3LI73 84 aa1.9□□□□□ -2.11
LRRK2-204ENST00000430804 KRTAP23-1A1A580 65 aa1.9□□□□□ -2.11
LRRK2-204ENST00000430804 LCE2DQ5TA82 110 aaPredicted RBP1.9□□□□□ -2.11
LRRK2-204ENST00000430804 ADGRG4Q8IZF6 3080 aa1.89□□□□□ -2.11
LRRK2-204ENST00000430804 DCHS2Q6V1P9 2916 aa1.89□□□□□ -2.11
LRRK2-204ENST00000430804 VWFP04275 2813 aa1.89□□□□□ -2.11
LRRK2-204ENST00000430804 CELSR2Q9HCU4 2923 aa1.88□□□□□ -2.11
LRRK2-204ENST00000430804 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
LRRK2-204ENST00000430804 CELSR1Q9NYQ6 3014 aa1.87□□□□□ -2.11
LRRK2-204ENST00000430804 LCE2BO14633 110 aa1.87□□□□□ -2.11
LRRK2-204ENST00000430804 KRTAP9-6A0A140TA67 174 aa1.87□□□□□ -2.11
LRRK2-204ENST00000430804 HUWE1Q7Z6Z7 4374 aaKnown RBP1.87□□□□□ -2.11
LRRK2-204ENST00000430804 KRTAP10-5P60370 271 aa1.87□□□□□ -2.11
LRRK2-204ENST00000430804 TGP01266 2768 aa1.85□□□□□ -2.11
LRRK2-204ENST00000430804 SRRM2Q9UQ35 2752 aaKnown RBP1.85□□□□□ -2.11
LRRK2-204ENST00000430804 KRTAP3-1Q9BYR8 98 aa1.85□□□□□ -2.11
LRRK2-204ENST00000430804 ALMS1Q8TCU4 4167 aa1.85□□□□□ -2.11
LRRK2-204ENST00000430804 MT2AP02795 61 aa1.85□□□□□ -2.11
LRRK2-204ENST00000430804 HRNRQ86YZ3 2850 aaPredicted RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms