RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 GCN1Q92616 2671 aaKnown RBP7.36□□□□□ -1.23
CDK12-201ENST00000430627 KRTAP11-1Q8IUC1 163 aa7.36□□□□□ -1.23
CDK12-201ENST00000430627 A8MU10 97 aa7.35□□□□□ -1.23
CDK12-201ENST00000430627 ZZEF1O43149 2961 aa7.34□□□□□ -1.23
CDK12-201ENST00000430627 ASH1LQ9NR48 2969 aaKnown RBP7.33□□□□□ -1.24
CDK12-201ENST00000430627 COL6A5A8TX70 2615 aa7.31□□□□□ -1.24
CDK12-201ENST00000430627 LAMA5O15230 3695 aa7.31□□□□□ -1.24
CDK12-201ENST00000430627 XP32Q5T750 250 aa7.29□□□□□ -1.24
CDK12-201ENST00000430627 SMG1Q96Q15 3661 aaKnown RBP7.28□□□□□ -1.24
CDK12-201ENST00000430627 Q5VV11 94 aa7.28□□□□□ -1.24
CDK12-201ENST00000430627 TEX15Q9BXT5 2789 aa7.27□□□□□ -1.25
CDK12-201ENST00000430627 DMBT1Q9UGM3 2413 aaPredicted RBP7.27□□□□□ -1.25
CDK12-201ENST00000430627 COL12A1Q99715 3063 aa7.25□□□□□ -1.25
CDK12-201ENST00000430627 RELNP78509 3460 aa7.25□□□□□ -1.25
CDK12-201ENST00000430627 UNC79Q9P2D8 2635 aa7.24□□□□□ -1.25
CDK12-201ENST00000430627 ZNF292O60281 2723 aa7.23□□□□□ -1.25
CDK12-201ENST00000430627 KRTAP29-1A8MX34 341 aaPredicted RBP7.2□□□□□ -1.26
CDK12-201ENST00000430627 TPRXLQ17RH7 258 aa7.2□□□□□ -1.26
CDK12-201ENST00000430627 DMXL1Q9Y485 3027 aa7.19□□□□□ -1.26
CDK12-201ENST00000430627 ASB16-AS1Q495Z4 193 aa7.19□□□□□ -1.26
CDK12-201ENST00000430627 SVEP1Q4LDE5 3571 aa7.18□□□□□ -1.26
CDK12-201ENST00000430627 IGSF10Q6WRI0 2623 aa7.18□□□□□ -1.26
CDK12-201ENST00000430627 KRTAP4-16G5E9R7 235 aaPredicted RBP7.16□□□□□ -1.26
CDK12-201ENST00000430627 NOTCH1P46531 2555 aa7.15□□□□□ -1.26
CDK12-201ENST00000430627 H3BS24 57 aa7.14□□□□□ -1.27
CDK12-201ENST00000430627 ITPR1Q14643 2758 aa7.14□□□□□ -1.27
CDK12-201ENST00000430627 NBEAL1Q6ZS30 2694 aa7.13□□□□□ -1.27
CDK12-201ENST00000430627 STAB2Q8WWQ8 2551 aa7.09□□□□□ -1.27
CDK12-201ENST00000430627 CUBNO60494 3623 aa7.08□□□□□ -1.28
CDK12-201ENST00000430627 TNRC18O15417 2968 aaPredicted RBP7.01□□□□□ -1.29
CDK12-201ENST00000430627 KRTAP7-1Q8IUC3 87 aa7.01□□□□□ -1.29
CDK12-201ENST00000430627 SPENQ96T58 3664 aaKnown RBP7.01□□□□□ -1.29
CDK12-201ENST00000430627 HIVEP1P15822 2718 aa7.01□□□□□ -1.29
CDK12-201ENST00000430627 UBR5O95071 2799 aaPredicted RBP6.99□□□□□ -1.29
CDK12-201ENST00000430627 UTP20O75691 2785 aaKnown RBP6.99□□□□□ -1.29
CDK12-201ENST00000430627 ITPR2Q14571 2701 aa6.99□□□□□ -1.29
CDK12-201ENST00000430627 KRTAP13-1Q8IUC0 172 aa6.98□□□□□ -1.29
CDK12-201ENST00000430627 MUC3AQ02505 3323 aa6.97□□□□□ -1.29
CDK12-201ENST00000430627 CRYBG3Q68DQ2 2970 aa6.95□□□□□ -1.3
CDK12-201ENST00000430627 HRNRQ86YZ3 2850 aaPredicted RBP6.94□□□□□ -1.3
CDK12-201ENST00000430627 FLNCQ14315 2725 aa6.94□□□□□ -1.3
CDK12-201ENST00000430627 APCP25054 2843 aa6.93□□□□□ -1.3
CDK12-201ENST00000430627 KRTAP1-4P0C5Y4 121 aa6.92□□□□□ -1.3
CDK12-201ENST00000430627 KRTAP13-3Q3SY46 172 aa6.92□□□□□ -1.3
CDK12-201ENST00000430627 CELSR2Q9HCU4 2923 aa6.9□□□□□ -1.3
CDK12-201ENST00000430627 A6NN06 94 aa6.9□□□□□ -1.3
CDK12-201ENST00000430627 ZANQ9Y493 2812 aa6.9□□□□□ -1.3
CDK12-201ENST00000430627 FBN2P35556 2912 aa6.89□□□□□ -1.31
CDK12-201ENST00000430627 KRTAP25-1Q3LHN0 102 aa6.89□□□□□ -1.31
CDK12-201ENST00000430627 PP632Q6XCG6 107 aa6.86□□□□□ -1.31
CDK12-201ENST00000430627 TENM4Q6N022 2769 aa6.86□□□□□ -1.31
CDK12-201ENST00000430627 KMT2BQ9UMN6 2715 aaPredicted RBP6.86□□□□□ -1.31
CDK12-201ENST00000430627 KRTAP16-1A8MUX0 517 aa6.85□□□□□ -1.31
CDK12-201ENST00000430627 CRCT1Q9UGL9 99 aa6.85□□□□□ -1.31
CDK12-201ENST00000430627 NSD1Q96L73 2696 aaPredicted RBP6.82□□□□□ -1.32
CDK12-201ENST00000430627 NDUFAF8A1L188 74 aa6.8□□□□□ -1.32
CDK12-201ENST00000430627 CELSR1Q9NYQ6 3014 aa6.8□□□□□ -1.32
CDK12-201ENST00000430627 DCHS2Q6V1P9 2916 aa6.78□□□□□ -1.32
CDK12-201ENST00000430627 NBPF19A0A087WUL8 3843 aa6.71□□□□□ -1.34
CDK12-201ENST00000430627 NF1P21359 2839 aa6.7□□□□□ -1.34
CDK12-201ENST00000430627 H0YAA0 97 aa6.66□□□□□ -1.34
CDK12-201ENST00000430627 CSMD2Q7Z408 3487 aa6.63□□□□□ -1.35
CDK12-201ENST00000430627 ZFHX3Q15911 3703 aa6.59□□□□□ -1.35
CDK12-201ENST00000430627 KRTAP12-2P59991 146 aa6.55□□□□□ -1.36
CDK12-201ENST00000430627 KRTAP15-1Q3LI76 137 aa6.55□□□□□ -1.36
CDK12-201ENST00000430627 BSNQ9UPA5 3926 aa6.54□□□□□ -1.36
CDK12-201ENST00000430627 MXRA5Q9NR99 2828 aa6.54□□□□□ -1.36
CDK12-201ENST00000430627 VPS13CQ709C8 3753 aa6.52□□□□□ -1.37
CDK12-201ENST00000430627 LORP23490 312 aaPredicted RBP6.51□□□□□ -1.37
CDK12-201ENST00000430627 NIPBLQ6KC79 2804 aaeCLIP6.48□□□□□ -1.371e-6■■■■□ 26.4
CDK12-201ENST00000430627 TENM2Q9NT68 2774 aa6.45□□□□□ -1.38
CDK12-201ENST00000430627 TENM3Q9P273 2699 aa6.34□□□□□ -1.4
CDK12-201ENST00000430627 KRTAP4-5Q9BYR2 181 aa6.33□□□□□ -1.4
CDK12-201ENST00000430627 TRRAPQ9Y4A5 3859 aa6.28□□□□□ -1.4
CDK12-201ENST00000430627 TGP01266 2768 aa6.27□□□□□ -1.41
CDK12-201ENST00000430627 CSMD3Q7Z407 3707 aa6.26□□□□□ -1.41
CDK12-201ENST00000430627 KRTAP13-4Q3LI77 160 aa6.25□□□□□ -1.41
CDK12-201ENST00000430627 FBN1P35555 2871 aaKnown RBP6.25□□□□□ -1.41
CDK12-201ENST00000430627 ANK3Q12955 4377 aaKnown RBP6.24□□□□□ -1.41
CDK12-201ENST00000430627 TENM1Q9UKZ4 2725 aa6.23□□□□□ -1.41
CDK12-201ENST00000430627 PDZD2O15018 2839 aa6.21□□□□□ -1.42
CDK12-201ENST00000430627 VWFP04275 2813 aa6.2□□□□□ -1.42
CDK12-201ENST00000430627 KRTAP10-12P60413 245 aa6.18□□□□□ -1.42
CDK12-201ENST00000430627 KRTAP8-1Q8IUC2 63 aa6.17□□□□□ -1.42
CDK12-201ENST00000430627 PKD1L1Q8TDX9 2849 aa6.17□□□□□ -1.42
CDK12-201ENST00000430627 KRTAP10-6P60371 365 aaPredicted RBP6.12□□□□□ -1.43
CDK12-201ENST00000430627 AKAP9Q99996 3911 aa6.06□□□□□ -1.44
CDK12-201ENST00000430627 MT1HL1P0DM35 61 aa6.05□□□□□ -1.44
CDK12-201ENST00000430627 ZNF469Q96JG9 3925 aaPredicted RBP6.04□□□□□ -1.44
CDK12-201ENST00000430627 OTOGQ6ZRI0 2925 aa6.03□□□□□ -1.44
CDK12-201ENST00000430627 SRRM2Q9UQ35 2752 aaKnown RBP6.03□□□□□ -1.44
CDK12-201ENST00000430627 KRTAP12-1P59990 96 aa6.02□□□□□ -1.45
CDK12-201ENST00000430627 KRTAP3-1Q9BYR8 98 aa5.91□□□□□ -1.46
CDK12-201ENST00000430627 FBN3Q75N90 2809 aa5.9□□□□□ -1.46
CDK12-201ENST00000430627 HUWE1Q7Z6Z7 4374 aaKnown RBP5.9□□□□□ -1.46
CDK12-201ENST00000430627 KRTAP10-5P60370 271 aa5.89□□□□□ -1.47
CDK12-201ENST00000430627 SPRR2FQ96RM1 72 aa5.84□□□□□ -1.47
CDK12-201ENST00000430627 KRTAP12-3P60328 96 aa5.81□□□□□ -1.48
CDK12-201ENST00000430627 MEGF8Q7Z7M0 2845 aa5.8□□□□□ -1.48
CDK12-201ENST00000430627 DNAH10Q8IVF4 4471 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms