RNA–Protein interactions for RNA: ENST00000429829.5

XIST-204, X inactive specific transcript, humanhuman

TSL 1 (best) BASIC

Gene XIST, Length 19,275 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-204ENST00000429829 TENM3Q9P273 2699 aa2.73□□□□□ -1.97
XIST-204ENST00000429829 COL6A3P12111 3177 aa2.73□□□□□ -1.97
XIST-204ENST00000429829 CHD7Q9P2D1 2997 aa2.72□□□□□ -1.97
XIST-204ENST00000429829 PP632Q6XCG6 107 aa2.72□□□□□ -1.97
XIST-204ENST00000429829 TGP01266 2768 aa2.72□□□□□ -1.97
XIST-204ENST00000429829 KMT2BQ9UMN6 2715 aaPredicted RBP2.72□□□□□ -1.97
XIST-204ENST00000429829 CFAP47Q6ZTR5 3102 aa2.71□□□□□ -1.98
XIST-204ENST00000429829 NIPBLQ6KC79 2804 aaeCLIP2.71□□□□□ -1.989e-27■□□□□ 10.3
XIST-204ENST00000429829 C10orf95Q9H7T3 257 aa2.71□□□□□ -1.98
XIST-204ENST00000429829 SPTBN5Q9NRC6 3674 aaKnown RBP2.7□□□□□ -1.98
XIST-204ENST00000429829 ATMQ13315 3056 aa2.69□□□□□ -1.98
XIST-204ENST00000429829 ZANQ9Y493 2812 aa2.69□□□□□ -1.98
XIST-204ENST00000429829 BOD1L1Q8NFC6 3051 aa2.68□□□□□ -1.98
XIST-204ENST00000429829 MYO15AQ9UKN7 3530 aa2.67□□□□□ -1.98
XIST-204ENST00000429829 ASPMQ8IZT6 3477 aa2.67□□□□□ -1.98
XIST-204ENST00000429829 TPRXLQ17RH7 258 aa2.67□□□□□ -1.98
XIST-204ENST00000429829 BRCA2P51587 3418 aa2.67□□□□□ -1.98
XIST-204ENST00000429829 DMXL1Q9Y485 3027 aa2.67□□□□□ -1.98
XIST-204ENST00000429829 LAMA1P25391 3075 aa2.66□□□□□ -1.98
XIST-204ENST00000429829 KRTAP1-3Q8IUG1 177 aa2.65□□□□□ -1.99
XIST-204ENST00000429829 ADGRG4Q8IZF6 3080 aa2.65□□□□□ -1.99
XIST-204ENST00000429829 TNP1P09430 55 aa2.64□□□□□ -1.99
XIST-204ENST00000429829 KRTAP7-1Q8IUC3 87 aa2.64□□□□□ -1.99
XIST-204ENST00000429829 USP34Q70CQ2 3546 aa2.64□□□□□ -1.99
XIST-204ENST00000429829 TACC2O95359 2948 aa2.64□□□□□ -1.99
XIST-204ENST00000429829 KRTAP13-3Q3SY46 172 aa2.64□□□□□ -1.99
XIST-204ENST00000429829 DMDP11532 3685 aa2.64□□□□□ -1.99
XIST-204ENST00000429829 NF1P21359 2839 aa2.64□□□□□ -1.99
XIST-204ENST00000429829 KRTAP10-3P60369 221 aa2.63□□□□□ -1.99
XIST-204ENST00000429829 TENM1Q9UKZ4 2725 aa2.63□□□□□ -1.99
XIST-204ENST00000429829 INE1O15225 51 aa2.62□□□□□ -1.99
XIST-204ENST00000429829 PRO2289Q9P1D8 64 aa2.62□□□□□ -1.99
XIST-204ENST00000429829 DCHS2Q6V1P9 2916 aa2.62□□□□□ -1.99
XIST-204ENST00000429829 WDFY3Q8IZQ1 3526 aa2.62□□□□□ -1.99
XIST-204ENST00000429829 KRTAP13-1Q8IUC0 172 aa2.6□□□□□ -1.99
XIST-204ENST00000429829 KRTAP1-1Q07627 177 aa2.6□□□□□ -1.99
XIST-204ENST00000429829 TNRC18O15417 2968 aaPredicted RBP2.6□□□□□ -1.99
XIST-204ENST00000429829 DCHS1Q96JQ0 3298 aa2.59□□□□□ -2
XIST-204ENST00000429829 RPS29P62273 56 aaKnown RBP2.59□□□□□ -2
XIST-204ENST00000429829 KRTAP10-8P60410 259 aa2.58□□□□□ -2
XIST-204ENST00000429829 KRTAP23-1A1A580 65 aa2.57□□□□□ -2
XIST-204ENST00000429829 FLNCQ14315 2725 aa2.57□□□□□ -2
XIST-204ENST00000429829 Q6ZRN7 208 aaPredicted RBP2.56□□□□□ -2
XIST-204ENST00000429829 TENM2Q9NT68 2774 aa2.56□□□□□ -2
XIST-204ENST00000429829 RELNP78509 3460 aa2.55□□□□□ -2
XIST-204ENST00000429829 SPEGQ15772 3267 aa2.55□□□□□ -2
XIST-204ENST00000429829 ZZEF1O43149 2961 aa2.55□□□□□ -2
XIST-204ENST00000429829 TENM4Q6N022 2769 aa2.53□□□□□ -2
XIST-204ENST00000429829 LOC400499M0QZD8 3231 aa2.53□□□□□ -2
XIST-204ENST00000429829 CELSR1Q9NYQ6 3014 aa2.53□□□□□ -2
XIST-204ENST00000429829 KRTAP10-1P60331 282 aa2.52□□□□□ -2.01
XIST-204ENST00000429829 MXRA5Q9NR99 2828 aa2.52□□□□□ -2.01
XIST-204ENST00000429829 ZFHX4Q86UP3 3567 aa2.52□□□□□ -2.01
XIST-204ENST00000429829 SMG1Q96Q15 3661 aaKnown RBP2.52□□□□□ -2.01
XIST-204ENST00000429829 SVEP1Q4LDE5 3571 aa2.51□□□□□ -2.01
XIST-204ENST00000429829 FBN2P35556 2912 aa2.5□□□□□ -2.01
XIST-204ENST00000429829 XP32Q5T750 250 aa2.5□□□□□ -2.01
XIST-204ENST00000429829 CUBNO60494 3623 aa2.5□□□□□ -2.01
XIST-204ENST00000429829 KRTAP10-2P60368 255 aa2.5□□□□□ -2.01
XIST-204ENST00000429829 SPENQ96T58 3664 aaKnown RBP2.5□□□□□ -2.01
XIST-204ENST00000429829 OTOGQ6ZRI0 2925 aa2.5□□□□□ -2.01
XIST-204ENST00000429829 KRTAP21-3Q3LHN1 58 aa2.48□□□□□ -2.01
XIST-204ENST00000429829 KRTAP1-5Q9BYS1 174 aa2.48□□□□□ -2.01
XIST-204ENST00000429829 PKD1L1Q8TDX9 2849 aa2.48□□□□□ -2.01
XIST-204ENST00000429829 MEGF8Q7Z7M0 2845 aa2.48□□□□□ -2.01
XIST-204ENST00000429829 A0A1B0GVY2 172 aa2.47□□□□□ -2.01
XIST-204ENST00000429829 KRTAP12-2P59991 146 aa2.47□□□□□ -2.01
XIST-204ENST00000429829 NBPF19A0A087WUL8 3843 aa2.46□□□□□ -2.02
XIST-204ENST00000429829 COL7A1Q02388 2944 aa2.46□□□□□ -2.02
XIST-204ENST00000429829 EYSQ5T1H1 3165 aa2.45□□□□□ -2.02
XIST-204ENST00000429829 KRTAP10-10P60014 251 aa2.45□□□□□ -2.02
XIST-204ENST00000429829 KRTAP13-2Q52LG2 175 aa2.44□□□□□ -2.02
XIST-204ENST00000429829 ALMS1Q8TCU4 4167 aa2.44□□□□□ -2.02
XIST-204ENST00000429829 KRTAP12-1P59990 96 aa2.44□□□□□ -2.02
XIST-204ENST00000429829 VWFP04275 2813 aa2.43□□□□□ -2.02
XIST-204ENST00000429829 KRTAP13-4Q3LI77 160 aa2.43□□□□□ -2.02
XIST-204ENST00000429829 CSMD1Q96PZ7 3565 aa2.42□□□□□ -2.02
XIST-204ENST00000429829 KRTAP10-6P60371 365 aaPredicted RBP2.41□□□□□ -2.02
XIST-204ENST00000429829 KRTAP3-1Q9BYR8 98 aa2.41□□□□□ -2.02
XIST-204ENST00000429829 LAMA5O15230 3695 aa2.4□□□□□ -2.03
XIST-204ENST00000429829 CSMD3Q7Z407 3707 aa2.39□□□□□ -2.03
XIST-204ENST00000429829 FBN3Q75N90 2809 aa2.33□□□□□ -2.04
XIST-204ENST00000429829 KRTAP3-2Q9BYR7 98 aa2.33□□□□□ -2.04
XIST-204ENST00000429829 TRRAPQ9Y4A5 3859 aa2.31□□□□□ -2.04
XIST-204ENST00000429829 KRTAP1-4P0C5Y4 121 aa2.29□□□□□ -2.04
XIST-204ENST00000429829 AKAP9Q99996 3911 aa2.28□□□□□ -2.04
XIST-204ENST00000429829 VPS13CQ709C8 3753 aa2.28□□□□□ -2.04
XIST-204ENST00000429829 CSMD2Q7Z408 3487 aa2.28□□□□□ -2.05
XIST-204ENST00000429829 CRCT1Q9UGL9 99 aa2.26□□□□□ -2.05
XIST-204ENST00000429829 HRNRQ86YZ3 2850 aaPredicted RBP2.23□□□□□ -2.05
XIST-204ENST00000429829 KRTAP3-3Q9BYR6 98 aa2.22□□□□□ -2.05
XIST-204ENST00000429829 MUC3AQ02505 3323 aa2.2□□□□□ -2.06
XIST-204ENST00000429829 FBN1P35555 2871 aaKnown RBP2.16□□□□□ -2.06
XIST-204ENST00000429829 DNAH2Q9P225 4427 aa2.12□□□□□ -2.07
XIST-204ENST00000429829 DNAH8Q96JB1 4490 aa2.12□□□□□ -2.07
XIST-204ENST00000429829 DNAH11Q96DT5 4516 aa2.1□□□□□ -2.07
XIST-204ENST00000429829 SPRR5A0A1B0GTR4 108 aa2.09□□□□□ -2.08
XIST-204ENST00000429829 KRTAP10-12P60413 245 aa2.07□□□□□ -2.08
XIST-204ENST00000429829 BSNQ9UPA5 3926 aa2.06□□□□□ -2.08
XIST-204ENST00000429829 DNAH10Q8IVF4 4471 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms