RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 KRTAP13-1Q8IUC0 172 aa5.22□□□□□ -1.57
HDAC1-202ENST00000428704 KRTAP11-1Q8IUC1 163 aa5.22□□□□□ -1.57
HDAC1-202ENST00000428704 Q8NBF4 154 aa5.22□□□□□ -1.57
HDAC1-202ENST00000428704 A0A1W2PNM2 257 aa5.21□□□□□ -1.58
HDAC1-202ENST00000428704 PRLHP81277 87 aa5.21□□□□□ -1.58
HDAC1-202ENST00000428704 PSORS1C2Q9UIG4 136 aa5.21□□□□□ -1.58
HDAC1-202ENST00000428704 UQCRQO14949 82 aa5.2□□□□□ -1.58
HDAC1-202ENST00000428704 CRYGAP11844 174 aa5.2□□□□□ -1.58
HDAC1-202ENST00000428704 NREPQ16612 68 aa5.2□□□□□ -1.58
HDAC1-202ENST00000428704 A0A087WVE0 104 aa5.19□□□□□ -1.58
HDAC1-202ENST00000428704 F8WEM9 126 aa5.19□□□□□ -1.58
HDAC1-202ENST00000428704 COX7CP15954 63 aa5.19□□□□□ -1.58
HDAC1-202ENST00000428704 SPINK6Q6UWN8 80 aa5.19□□□□□ -1.58
HDAC1-202ENST00000428704 C3orf22Q8N5N4 141 aa5.19□□□□□ -1.58
HDAC1-202ENST00000428704 HIGD2AQ9BW72 106 aa5.19□□□□□ -1.58
HDAC1-202ENST00000428704 CCDC179H3BU77 68 aa5.18□□□□□ -1.58
HDAC1-202ENST00000428704 SERP2Q8N6R1 65 aa5.18□□□□□ -1.58
HDAC1-202ENST00000428704 UBE2AP49459 152 aa5.17□□□□□ -1.58
HDAC1-202ENST00000428704 SMIM20Q8N5G0 67 aa5.17□□□□□ -1.58
HDAC1-202ENST00000428704 PRR4Q16378 134 aa5.16□□□□□ -1.58
HDAC1-202ENST00000428704 IGFL1Q6UW32 110 aa5.16□□□□□ -1.58
HDAC1-202ENST00000428704 BPY2O14599 106 aa5.15□□□□□ -1.59
HDAC1-202ENST00000428704 IGLV7-43P04211 117 aa5.15□□□□□ -1.59
HDAC1-202ENST00000428704 LINC00483Q53H64 154 aa5.14□□□□□ -1.59
HDAC1-202ENST00000428704 IGKV4-1P06312 121 aa5.13□□□□□ -1.59
HDAC1-202ENST00000428704 ZNF706Q9Y5V0 76 aaPredicted RBP5.13□□□□□ -1.59
HDAC1-202ENST00000428704 TRAV7A0A075B6U4 112 aa5.12□□□□□ -1.59
HDAC1-202ENST00000428704 ZNF861PO60384 105 aa5.12□□□□□ -1.59
HDAC1-202ENST00000428704 MUC17Q685J3 4493 aa5.12□□□□□ -1.59
HDAC1-202ENST00000428704 KRTAP1-4P0C5Y4 121 aa5.11□□□□□ -1.59
HDAC1-202ENST00000428704 C9orf153Q5TBE3 101 aa5.11□□□□□ -1.59
HDAC1-202ENST00000428704 DSCR10P59022 87 aa5.1□□□□□ -1.59
HDAC1-202ENST00000428704 PRR26Q8N8Z3 221 aa5.09□□□□□ -1.59
HDAC1-202ENST00000428704 A0A087WSZ3 146 aa5.08□□□□□ -1.6
HDAC1-202ENST00000428704 A0A0G2JQZ4 141 aa5.06□□□□□ -1.6
HDAC1-202ENST00000428704 Q8N9L7 120 aa5.06□□□□□ -1.6
HDAC1-202ENST00000428704 OCR1Q9BZK8 76 aa5.06□□□□□ -1.6
HDAC1-202ENST00000428704 LINC00472Q9H8W2 130 aa5.06□□□□□ -1.6
HDAC1-202ENST00000428704 J3KT08 172 aa5.05□□□□□ -1.6
HDAC1-202ENST00000428704 KLKP1Q107X0 134 aa5.05□□□□□ -1.6
HDAC1-202ENST00000428704 K7EQZ3 153 aa5.03□□□□□ -1.6
HDAC1-202ENST00000428704 TMEM258P61165 79 aa5.03□□□□□ -1.6
HDAC1-202ENST00000428704 SS18L2Q9UHA2 77 aa5.03□□□□□ -1.6
HDAC1-202ENST00000428704 A0A087X002 238 aa5.02□□□□□ -1.61
HDAC1-202ENST00000428704 A8MWP4 228 aa5.02□□□□□ -1.61
HDAC1-202ENST00000428704 HCG22E2RYF7 251 aa5.02□□□□□ -1.61
HDAC1-202ENST00000428704 CD164Q04900 197 aa5.02□□□□□ -1.61
HDAC1-202ENST00000428704 SSBP3-AS1Q7Z2R9 100 aa5.02□□□□□ -1.61
HDAC1-202ENST00000428704 IGLV9-49A0A0B4J1Y8 123 aa5.01□□□□□ -1.61
HDAC1-202ENST00000428704 NDUFC1O43677 76 aa5.01□□□□□ -1.61
HDAC1-202ENST00000428704 PRR15Q8IV56 129 aa5.01□□□□□ -1.61
HDAC1-202ENST00000428704 C20orf197Q8N268 126 aa5.01□□□□□ -1.61
HDAC1-202ENST00000428704 CYSTM1Q9H1C7 97 aa5.01□□□□□ -1.61
HDAC1-202ENST00000428704 RPS28P62857 69 aaKnown RBP5□□□□□ -1.61
HDAC1-202ENST00000428704 MOBPQ13875 183 aa4.99□□□□□ -1.61
HDAC1-202ENST00000428704 FAM229BQ4G0N7 80 aa4.99□□□□□ -1.61
HDAC1-202ENST00000428704 KRTAP13-2Q52LG2 175 aa4.99□□□□□ -1.61
HDAC1-202ENST00000428704 Q96NJ1 140 aa4.99□□□□□ -1.61
HDAC1-202ENST00000428704 ANAPC11Q9NYG5 84 aa4.99□□□□□ -1.61
HDAC1-202ENST00000428704 H7BZZ5 65 aa4.98□□□□□ -1.61
HDAC1-202ENST00000428704 ASB16-AS1Q495Z4 193 aa4.98□□□□□ -1.61
HDAC1-202ENST00000428704 C5orf47Q569G3 176 aa4.98□□□□□ -1.61
HDAC1-202ENST00000428704 TMEM254Q8TBM7 123 aa4.98□□□□□ -1.61
HDAC1-202ENST00000428704 NDUFB1O75438 58 aa4.97□□□□□ -1.61
HDAC1-202ENST00000428704 DEFB116Q30KQ4 102 aa4.97□□□□□ -1.61
HDAC1-202ENST00000428704 Q5XG85 94 aa4.96□□□□□ -1.62
HDAC1-202ENST00000428704 SYNE2Q8WXH0 6885 aaKnown RBP4.96□□□□□ -1.62
HDAC1-202ENST00000428704 CASC2Q6XLA1 102 aa4.94□□□□□ -1.62
HDAC1-202ENST00000428704 SVIPQ8NHG7 77 aa4.94□□□□□ -1.62
HDAC1-202ENST00000428704 TYMSOSQ8TAI1 123 aa4.94□□□□□ -1.62
HDAC1-202ENST00000428704 ZCCHC13Q8WW36 166 aaKnown RBP4.94□□□□□ -1.62
HDAC1-202ENST00000428704 MMP24-AS1A0A0U1RRL7 71 aa4.93□□□□□ -1.62
HDAC1-202ENST00000428704 H3BPC8 53 aa4.93□□□□□ -1.62
HDAC1-202ENST00000428704 ATP5EP56381 51 aaPredicted RBP4.93□□□□□ -1.62
HDAC1-202ENST00000428704 SNURFQ9Y675 71 aa4.93□□□□□ -1.62
HDAC1-202ENST00000428704 MACF1Q9UPN3 7388 aaKnown RBP4.92□□□□□ -1.62
HDAC1-202ENST00000428704 WFDC13Q8IUB5 93 aa4.92□□□□□ -1.62
HDAC1-202ENST00000428704 FAM236DA0A1B0GTK5 79 aa4.91□□□□□ -1.62
HDAC1-202ENST00000428704 A0A1B0GVX0 72 aa4.91□□□□□ -1.62
HDAC1-202ENST00000428704 FAM236CP0DP71 79 aa4.91□□□□□ -1.62
HDAC1-202ENST00000428704 HRCT1Q6UXD1 115 aa4.91□□□□□ -1.62
HDAC1-202ENST00000428704 TP53AIP1Q9HCN2 124 aa4.91□□□□□ -1.62
HDAC1-202ENST00000428704 C8orf17Q9NRJ1 99 aa4.91□□□□□ -1.62
HDAC1-202ENST00000428704 hDV103S1A0JD37 113 aa4.9□□□□□ -1.63
HDAC1-202ENST00000428704 LINC00304Q8N9R0 145 aa4.9□□□□□ -1.63
HDAC1-202ENST00000428704 MP68P56378 58 aa4.89□□□□□ -1.63
HDAC1-202ENST00000428704 RETNLBQ9BQ08 111 aa4.88□□□□□ -1.63
HDAC1-202ENST00000428704 SERP1Q9Y6X1 66 aa4.88□□□□□ -1.63
HDAC1-202ENST00000428704 C8orf87E5RJ46 101 aa4.87□□□□□ -1.63
HDAC1-202ENST00000428704 TPRXLQ17RH7 258 aa4.87□□□□□ -1.63
HDAC1-202ENST00000428704 RPS29P62273 56 aaKnown RBP4.86□□□□□ -1.63
HDAC1-202ENST00000428704 MRPL34Q9BQ48 92 aaKnown RBP4.86□□□□□ -1.63
HDAC1-202ENST00000428704 IGHV6-1A0A0B4J1U7 121 aa4.85□□□□□ -1.63
HDAC1-202ENST00000428704 LIMD2Q9BT23 127 aa4.85□□□□□ -1.63
HDAC1-202ENST00000428704 USH2AO75445 5202 aa4.85□□□□□ -1.63
HDAC1-202ENST00000428704 SSPOA2VEC9 5147 aa4.84□□□□□ -1.63
HDAC1-202ENST00000428704 TRAV22A0A0B4J277 110 aa4.84□□□□□ -1.63
HDAC1-202ENST00000428704 H0Y9P7 68 aa4.84□□□□□ -1.63
HDAC1-202ENST00000428704 SPINK1P00995 79 aa4.84□□□□□ -1.63
HDAC1-202ENST00000428704 IGLV7-46A0A075B6I9 117 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms