RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 PCLOQ9Y6V0 5065 aa9.68□□□□□ -0.86
CHEK1-202ENST00000427383 DMBT1Q9UGM3 2413 aaPredicted RBP9.67□□□□□ -0.86
CHEK1-202ENST00000427383 A0A1B0GVX0 72 aa9.64□□□□□ -0.87
CHEK1-202ENST00000427383 NDUFB1O75438 58 aa9.64□□□□□ -0.87
CHEK1-202ENST00000427383 KRTAP3-3Q9BYR6 98 aa9.63□□□□□ -0.87
CHEK1-202ENST00000427383 KRTAP3-2Q9BYR7 98 aa9.63□□□□□ -0.87
CHEK1-202ENST00000427383 FAM236AA0A1B0GUQ0 79 aa9.62□□□□□ -0.87
CHEK1-202ENST00000427383 FAM236BA0A1B0GV22 79 aa9.62□□□□□ -0.87
CHEK1-202ENST00000427383 SCGB1A1P11684 91 aa9.61□□□□□ -0.87
CHEK1-202ENST00000427383 IGHV6-1A0A0B4J1U7 121 aa9.59□□□□□ -0.87
CHEK1-202ENST00000427383 MMP24-AS1A0A0U1RRL7 71 aa9.59□□□□□ -0.87
CHEK1-202ENST00000427383 RETNLBQ9BQ08 111 aa9.59□□□□□ -0.87
CHEK1-202ENST00000427383 HCG22E2RYF7 251 aa9.58□□□□□ -0.88
CHEK1-202ENST00000427383 NOTCH2NLQ7Z3S9 236 aa9.57□□□□□ -0.88
CHEK1-202ENST00000427383 C8orf17Q9NRJ1 99 aa9.57□□□□□ -0.88
CHEK1-202ENST00000427383 C8orf87E5RJ46 101 aa9.52□□□□□ -0.89
CHEK1-202ENST00000427383 WFDC13Q8IUB5 93 aa9.52□□□□□ -0.89
CHEK1-202ENST00000427383 CASC2Q6XLA1 102 aa9.51□□□□□ -0.89
CHEK1-202ENST00000427383 hDV103S1A0JD37 113 aa9.51□□□□□ -0.89
CHEK1-202ENST00000427383 FP248Q71RG6 208 aaPredicted RBP9.5□□□□□ -0.89
CHEK1-202ENST00000427383 ATOX1O00244 68 aa9.48□□□□□ -0.89
CHEK1-202ENST00000427383 LINC00313P59037 77 aa9.48□□□□□ -0.89
CHEK1-202ENST00000427383 KRTAP16-1A8MUX0 517 aa9.48□□□□□ -0.89
CHEK1-202ENST00000427383 J3QL48 77 aa9.47□□□□□ -0.89
CHEK1-202ENST00000427383 TMEM254Q8TBM7 123 aa9.47□□□□□ -0.89
CHEK1-202ENST00000427383 MRPL34Q9BQ48 92 aaKnown RBP9.45□□□□□ -0.9
CHEK1-202ENST00000427383 OCR1Q9BZK8 76 aa9.44□□□□□ -0.9
CHEK1-202ENST00000427383 HERC1Q15751 4861 aa9.41□□□□□ -0.9
CHEK1-202ENST00000427383 IGLV7-46A0A075B6I9 117 aa9.39□□□□□ -0.91
CHEK1-202ENST00000427383 SMIM20Q8N5G0 67 aa9.39□□□□□ -0.91
CHEK1-202ENST00000427383 Q8N9P0 234 aaPredicted RBP9.39□□□□□ -0.91
CHEK1-202ENST00000427383 ANAPC13Q9BS18 74 aa9.39□□□□□ -0.91
CHEK1-202ENST00000427383 C9orf92A6NGG3 77 aa9.39□□□□□ -0.91
CHEK1-202ENST00000427383 TRAV7A0A075B6U4 112 aa9.37□□□□□ -0.91
CHEK1-202ENST00000427383 KRTAP13-3Q3SY46 172 aa9.37□□□□□ -0.91
CHEK1-202ENST00000427383 SERP2Q8N6R1 65 aa9.36□□□□□ -0.91
CHEK1-202ENST00000427383 PRR4Q16378 134 aa9.36□□□□□ -0.91
CHEK1-202ENST00000427383 LPAP08519 4548 aa9.34□□□□□ -0.91
CHEK1-202ENST00000427383 C20orf166-AS1Q96NR2 134 aa9.32□□□□□ -0.92
CHEK1-202ENST00000427383 TP53AIP1Q9HCN2 124 aa9.32□□□□□ -0.92
CHEK1-202ENST00000427383 NDUFS5O43920 106 aa9.32□□□□□ -0.92
CHEK1-202ENST00000427383 COX7CP15954 63 aa9.31□□□□□ -0.92
CHEK1-202ENST00000427383 TPRXLQ17RH7 258 aa9.31□□□□□ -0.92
CHEK1-202ENST00000427383 A8MUU9 505 aa9.3□□□□□ -0.92
CHEK1-202ENST00000427383 UQCRQO14949 82 aa9.3□□□□□ -0.92
CHEK1-202ENST00000427383 PCP4P48539 62 aa9.3□□□□□ -0.92
CHEK1-202ENST00000427383 HMCN2Q8NDA2 5059 aa9.28□□□□□ -0.92
CHEK1-202ENST00000427383 LRP2P98164 4655 aa9.27□□□□□ -0.93
CHEK1-202ENST00000427383 XP32Q5T750 250 aa9.26□□□□□ -0.93
CHEK1-202ENST00000427383 TRAV22A0A0B4J277 110 aa9.25□□□□□ -0.93
CHEK1-202ENST00000427383 Q75L30 129 aa9.25□□□□□ -0.93
CHEK1-202ENST00000427383 Q5W150 140 aa9.24□□□□□ -0.93
CHEK1-202ENST00000427383 C5orf47Q569G3 176 aa9.23□□□□□ -0.93
CHEK1-202ENST00000427383 CCDC179H3BU77 68 aa9.22□□□□□ -0.93
CHEK1-202ENST00000427383 H0Y9P7 68 aa9.2□□□□□ -0.94
CHEK1-202ENST00000427383 C20orf197Q8N268 126 aa9.19□□□□□ -0.94
CHEK1-202ENST00000427383 RPL37P61927 97 aaKnown RBP9.18□□□□□ -0.94
CHEK1-202ENST00000427383 ZCCHC13Q8WW36 166 aaKnown RBP9.18□□□□□ -0.94
CHEK1-202ENST00000427383 A0A0U1RQV1 116 aa9.17□□□□□ -0.94
CHEK1-202ENST00000427383 MP68P56378 58 aa9.16□□□□□ -0.94
CHEK1-202ENST00000427383 KLKP1Q107X0 134 aa9.16□□□□□ -0.94
CHEK1-202ENST00000427383 H3BPC8 53 aa9.14□□□□□ -0.95
CHEK1-202ENST00000427383 SNURFQ9Y675 71 aa9.13□□□□□ -0.95
CHEK1-202ENST00000427383 LINC00208Q96KT6 92 aa9.13□□□□□ -0.95
CHEK1-202ENST00000427383 CYSTM1Q9H1C7 97 aa9.13□□□□□ -0.95
CHEK1-202ENST00000427383 C1orf64Q8NEQ6 169 aa9.11□□□□□ -0.95
CHEK1-202ENST00000427383 LOC101927531A0A1B0GV80 90 aa9.07□□□□□ -0.96
CHEK1-202ENST00000427383 ATP11AUNQ6ZP68 121 aa9.07□□□□□ -0.96
CHEK1-202ENST00000427383 IGKV2-30P06310 120 aa9.06□□□□□ -0.96
CHEK1-202ENST00000427383 CYP4F30PQ9H0H9 118 aa9.04□□□□□ -0.96
CHEK1-202ENST00000427383 MUC17Q685J3 4493 aa9.04□□□□□ -0.96
CHEK1-202ENST00000427383 H7BZZ5 65 aa9.03□□□□□ -0.96
CHEK1-202ENST00000427383 NDUFC1O43677 76 aa9□□□□□ -0.97
CHEK1-202ENST00000427383 IGKV2D-30A0A075B6S6 120 aa9□□□□□ -0.97
CHEK1-202ENST00000427383 PCOTHQ58A44 107 aa8.99□□□□□ -0.97
CHEK1-202ENST00000427383 C7orf65Q6ZTY9 151 aa8.99□□□□□ -0.97
CHEK1-202ENST00000427383 SPINK7P58062 85 aa8.95□□□□□ -0.98
CHEK1-202ENST00000427383 SEC61BP60468 96 aaKnown RBP8.93□□□□□ -0.98
CHEK1-202ENST00000427383 TMEM258P61165 79 aa8.88□□□□□ -0.99
CHEK1-202ENST00000427383 UBR4Q5T4S7 5183 aa8.88□□□□□ -0.99
CHEK1-202ENST00000427383 HRES1P13985 223 aa8.88□□□□□ -0.99
CHEK1-202ENST00000427383 SPANXA2-OT1Q8N9U9 137 aa8.88□□□□□ -0.99
CHEK1-202ENST00000427383 MUC2Q02817 5179 aa8.85□□□□□ -0.99
CHEK1-202ENST00000427383 KRTAP4-1Q9BYQ7 146 aa8.81□□□□□ -1
CHEK1-202ENST00000427383 FAM236DA0A1B0GTK5 79 aa8.81□□□□□ -1
CHEK1-202ENST00000427383 FAM236CP0DP71 79 aa8.81□□□□□ -1
CHEK1-202ENST00000427383 C4orf26Q17RF5 130 aa8.79□□□□□ -1
CHEK1-202ENST00000427383 ATP5EP56381 51 aaPredicted RBP8.78□□□□□ -1
CHEK1-202ENST00000427383 MPLKIPQ8TAP9 179 aa8.77□□□□□ -1.01
CHEK1-202ENST00000427383 RNF213Q63HN8 5207 aa8.76□□□□□ -1.01
CHEK1-202ENST00000427383 DMAC1Q96GE9 116 aa8.75□□□□□ -1.01
CHEK1-202ENST00000427383 KRTAP3-1Q9BYR8 98 aa8.72□□□□□ -1.01
CHEK1-202ENST00000427383 COX6B2Q6YFQ2 88 aa8.71□□□□□ -1.02
CHEK1-202ENST00000427383 A8MUN3 132 aa8.68□□□□□ -1.02
CHEK1-202ENST00000427383 ACYP2P14621 99 aa8.62□□□□□ -1.03
CHEK1-202ENST00000427383 RBM12B-AS1Q9P1G2 102 aa8.62□□□□□ -1.03
CHEK1-202ENST00000427383 KRTAP19-2Q3LHN2 52 aa8.61□□□□□ -1.03
CHEK1-202ENST00000427383 SERP1Q9Y6X1 66 aa8.59□□□□□ -1.03
CHEK1-202ENST00000427383 COA5Q86WW8 74 aa8.58□□□□□ -1.04
CHEK1-202ENST00000427383 RPS28P62857 69 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms