RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 LOC400499M0QZD8 3231 aa7.92□□□□□ -1.14
RPL28-202ENST00000426763 DMAC1Q96GE9 116 aa7.92□□□□□ -1.14
RPL28-202ENST00000426763 Q75L30 129 aa7.92□□□□□ -1.14
RPL28-202ENST00000426763 NOTCH2NLQ7Z3S9 236 aa7.91□□□□□ -1.14
RPL28-202ENST00000426763 R4GN34 69 aa7.91□□□□□ -1.14
RPL28-202ENST00000426763 CYSTM1Q9H1C7 97 aa7.9□□□□□ -1.14
RPL28-202ENST00000426763 DCHS2Q6V1P9 2916 aa7.9□□□□□ -1.14
RPL28-202ENST00000426763 DMBT1Q9UGM3 2413 aaPredicted RBP7.9□□□□□ -1.15
RPL28-202ENST00000426763 ASH1LQ9NR48 2969 aaKnown RBP7.87□□□□□ -1.15
RPL28-202ENST00000426763 KTN1-AS1Q86SY8 53 aa7.82□□□□□ -1.16
RPL28-202ENST00000426763 LUZP6Q538Z0 58 aa7.8□□□□□ -1.16
RPL28-202ENST00000426763 NF1P21359 2839 aa7.78□□□□□ -1.16
RPL28-202ENST00000426763 RPL37P61927 97 aaKnown RBP7.78□□□□□ -1.16
RPL28-202ENST00000426763 H1FX-AS1Q4G0G2 97 aa7.77□□□□□ -1.17
RPL28-202ENST00000426763 MYO15AQ9UKN7 3530 aa7.76□□□□□ -1.17
RPL28-202ENST00000426763 M0QZ58 72 aa7.76□□□□□ -1.17
RPL28-202ENST00000426763 FBN2P35556 2912 aa7.76□□□□□ -1.17
RPL28-202ENST00000426763 LCA10Q71F78 164 aa7.75□□□□□ -1.17
RPL28-202ENST00000426763 Q5VV11 94 aa7.73□□□□□ -1.17
RPL28-202ENST00000426763 ADM2Q7Z4H4 148 aa7.73□□□□□ -1.17
RPL28-202ENST00000426763 FLG2Q5D862 2391 aaPredicted RBP7.72□□□□□ -1.17
RPL28-202ENST00000426763 MXRA5Q9NR99 2828 aa7.71□□□□□ -1.17
RPL28-202ENST00000426763 KRTAP1-4P0C5Y4 121 aa7.69□□□□□ -1.18
RPL28-202ENST00000426763 PDZD2O15018 2839 aa7.67□□□□□ -1.18
RPL28-202ENST00000426763 A8MUU9 505 aa7.64□□□□□ -1.19
RPL28-202ENST00000426763 PLAC4Q8WY50 150 aa7.64□□□□□ -1.19
RPL28-202ENST00000426763 C20orf166-AS1Q96NR2 134 aa7.63□□□□□ -1.19
RPL28-202ENST00000426763 RELNP78509 3460 aa7.62□□□□□ -1.19
RPL28-202ENST00000426763 SPATA8Q6RVD6 105 aa7.57□□□□□ -1.2
RPL28-202ENST00000426763 TENM2Q9NT68 2774 aa7.57□□□□□ -1.2
RPL28-202ENST00000426763 CELSR1Q9NYQ6 3014 aa7.55□□□□□ -1.2
RPL28-202ENST00000426763 TENM1Q9UKZ4 2725 aa7.54□□□□□ -1.2
RPL28-202ENST00000426763 A0A1B0GVY2 172 aa7.53□□□□□ -1.2
RPL28-202ENST00000426763 XP32Q5T750 250 aa7.53□□□□□ -1.2
RPL28-202ENST00000426763 DCHS1Q96JQ0 3298 aa7.53□□□□□ -1.2
RPL28-202ENST00000426763 ROMO1P60602 79 aa7.53□□□□□ -1.2
RPL28-202ENST00000426763 TENM3Q9P273 2699 aa7.49□□□□□ -1.21
RPL28-202ENST00000426763 TPRXLQ17RH7 258 aa7.48□□□□□ -1.21
RPL28-202ENST00000426763 OTOGQ6ZRI0 2925 aa7.48□□□□□ -1.21
RPL28-202ENST00000426763 LAMA5O15230 3695 aa7.46□□□□□ -1.22
RPL28-202ENST00000426763 PRAC1Q96KF2 57 aa7.45□□□□□ -1.22
RPL28-202ENST00000426763 WDFY3Q8IZQ1 3526 aa7.44□□□□□ -1.22
RPL28-202ENST00000426763 H3BS24 57 aa7.43□□□□□ -1.22
RPL28-202ENST00000426763 ASPMQ8IZT6 3477 aa7.41□□□□□ -1.22
RPL28-202ENST00000426763 NBPF19A0A087WUL8 3843 aa7.4□□□□□ -1.22
RPL28-202ENST00000426763 MUC3AQ02505 3323 aa7.39□□□□□ -1.23
RPL28-202ENST00000426763 DMDP11532 3685 aa7.38□□□□□ -1.23
RPL28-202ENST00000426763 A0A0A0MQY5 61 aa7.36□□□□□ -1.23
RPL28-202ENST00000426763 KRTAP13-3Q3SY46 172 aa7.35□□□□□ -1.23
RPL28-202ENST00000426763 KRTAP10-8P60410 259 aa7.35□□□□□ -1.23
RPL28-202ENST00000426763 A8MU10 97 aa7.34□□□□□ -1.23
RPL28-202ENST00000426763 KRTAP16-1A8MUX0 517 aa7.33□□□□□ -1.24
RPL28-202ENST00000426763 PKD1L1Q8TDX9 2849 aa7.32□□□□□ -1.24
RPL28-202ENST00000426763 ANK3Q12955 4377 aaKnown RBP7.29□□□□□ -1.24
RPL28-202ENST00000426763 ZFHX4Q86UP3 3567 aa7.27□□□□□ -1.25
RPL28-202ENST00000426763 VWFP04275 2813 aa7.24□□□□□ -1.25
RPL28-202ENST00000426763 TGP01266 2768 aa7.23□□□□□ -1.25
RPL28-202ENST00000426763 FBN1P35555 2871 aaKnown RBP7.22□□□□□ -1.25
RPL28-202ENST00000426763 ZFHX3Q15911 3703 aa7.18□□□□□ -1.26
RPL28-202ENST00000426763 TNP1P09430 55 aa7.15□□□□□ -1.27
RPL28-202ENST00000426763 SMG1Q96Q15 3661 aaKnown RBP7.11□□□□□ -1.27
RPL28-202ENST00000426763 A6NN06 94 aa7.1□□□□□ -1.27
RPL28-202ENST00000426763 KRTAP10-10P60014 251 aa7.1□□□□□ -1.27
RPL28-202ENST00000426763 KRTAP25-1Q3LHN0 102 aa7.06□□□□□ -1.28
RPL28-202ENST00000426763 CSMD1Q96PZ7 3565 aa7.02□□□□□ -1.29
RPL28-202ENST00000426763 CSMD2Q7Z408 3487 aa6.98□□□□□ -1.29
RPL28-202ENST00000426763 SPENQ96T58 3664 aaKnown RBP6.98□□□□□ -1.29
RPL28-202ENST00000426763 BSNQ9UPA5 3926 aa6.97□□□□□ -1.29
RPL28-202ENST00000426763 H0YAA0 97 aa6.94□□□□□ -1.3
RPL28-202ENST00000426763 P0C880 135 aa6.93□□□□□ -1.3
RPL28-202ENST00000426763 PRO2289Q9P1D8 64 aa6.92□□□□□ -1.3
RPL28-202ENST00000426763 TRRAPQ9Y4A5 3859 aa6.9□□□□□ -1.3
RPL28-202ENST00000426763 PP632Q6XCG6 107 aa6.9□□□□□ -1.31
RPL28-202ENST00000426763 FBN3Q75N90 2809 aa6.86□□□□□ -1.31
RPL28-202ENST00000426763 SVEP1Q4LDE5 3571 aa6.85□□□□□ -1.31
RPL28-202ENST00000426763 MT1HL1P0DM35 61 aa6.83□□□□□ -1.32
RPL28-202ENST00000426763 HUWE1Q7Z6Z7 4374 aaKnown RBP6.8□□□□□ -1.32
RPL28-202ENST00000426763 MEGF8Q7Z7M0 2845 aa6.78□□□□□ -1.32
RPL28-202ENST00000426763 C10orf95Q9H7T3 257 aa6.75□□□□□ -1.33
RPL28-202ENST00000426763 KRTAP10-4P60372 401 aaPredicted RBP6.73□□□□□ -1.33
RPL28-202ENST00000426763 SRRM2Q9UQ35 2752 aaKnown RBP6.73□□□□□ -1.33
RPL28-202ENST00000426763 KRTAP3-1Q9BYR8 98 aa6.7□□□□□ -1.34
RPL28-202ENST00000426763 KRTAP4-5Q9BYR2 181 aa6.68□□□□□ -1.34
RPL28-202ENST00000426763 ALMS1Q8TCU4 4167 aa6.67□□□□□ -1.34
RPL28-202ENST00000426763 COL7A1Q02388 2944 aa6.62□□□□□ -1.35
RPL28-202ENST00000426763 KRTAP12-2P59991 146 aa6.58□□□□□ -1.36
RPL28-202ENST00000426763 CUBNO60494 3623 aa6.57□□□□□ -1.36
RPL28-202ENST00000426763 NDUFAF8A1L188 74 aa6.57□□□□□ -1.36
RPL28-202ENST00000426763 DNAH9Q9NYC9 4486 aa6.54□□□□□ -1.36
RPL28-202ENST00000426763 AKAP9Q99996 3911 aa6.54□□□□□ -1.36
RPL28-202ENST00000426763 KRTAP12-1P59990 96 aa6.52□□□□□ -1.37
RPL28-202ENST00000426763 VPS13CQ709C8 3753 aa6.5□□□□□ -1.37
RPL28-202ENST00000426763 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
RPL28-202ENST00000426763 KRTAP10-6P60371 365 aaPredicted RBP6.44□□□□□ -1.38
RPL28-202ENST00000426763 ZNF469Q96JG9 3925 aaPredicted RBP6.44□□□□□ -1.38
RPL28-202ENST00000426763 DNAH5Q8TE73 4624 aa6.33□□□□□ -1.4
RPL28-202ENST00000426763 KRTAP3-3Q9BYR6 98 aa6.32□□□□□ -1.4
RPL28-202ENST00000426763 DNHD1Q96M86 4753 aa6.29□□□□□ -1.4
RPL28-202ENST00000426763 PLECQ15149 4684 aaKnown RBP6.26□□□□□ -1.41
RPL28-202ENST00000426763 DNAH1Q9P2D7 4330 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms