RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 MT1HL1P0DM35 61 aa8.56□□□□□ -1.04
GINS3-203ENST00000426538 MYCBP2O75592 4640 aa8.56□□□□□ -1.04
GINS3-203ENST00000426538 HCG22E2RYF7 251 aa8.55□□□□□ -1.04
GINS3-203ENST00000426538 KRTAP29-1A8MX34 341 aaPredicted RBP8.52□□□□□ -1.05
GINS3-203ENST00000426538 WFDC13Q8IUB5 93 aa8.52□□□□□ -1.05
GINS3-203ENST00000426538 ATOX1O00244 68 aa8.51□□□□□ -1.05
GINS3-203ENST00000426538 C8orf17Q9NRJ1 99 aa8.51□□□□□ -1.05
GINS3-203ENST00000426538 CASC2Q6XLA1 102 aa8.51□□□□□ -1.05
GINS3-203ENST00000426538 HERC2O95714 4834 aa8.51□□□□□ -1.05
GINS3-203ENST00000426538 RETNLBQ9BQ08 111 aa8.5□□□□□ -1.05
GINS3-203ENST00000426538 MMP24-AS1A0A0U1RRL7 71 aa8.49□□□□□ -1.05
GINS3-203ENST00000426538 hDV103S1A0JD37 113 aa8.49□□□□□ -1.05
GINS3-203ENST00000426538 C8orf87E5RJ46 101 aa8.49□□□□□ -1.05
GINS3-203ENST00000426538 DMBT1Q9UGM3 2413 aaPredicted RBP8.49□□□□□ -1.05
GINS3-203ENST00000426538 LINC00313P59037 77 aa8.49□□□□□ -1.05
GINS3-203ENST00000426538 NOTCH2NLQ7Z3S9 236 aa8.47□□□□□ -1.05
GINS3-203ENST00000426538 ANAPC13Q9BS18 74 aa8.47□□□□□ -1.05
GINS3-203ENST00000426538 J3QL48 77 aa8.46□□□□□ -1.06
GINS3-203ENST00000426538 PCP4P48539 62 aa8.46□□□□□ -1.06
GINS3-203ENST00000426538 SMIM20Q8N5G0 67 aa8.45□□□□□ -1.06
GINS3-203ENST00000426538 TMEM254Q8TBM7 123 aa8.43□□□□□ -1.06
GINS3-203ENST00000426538 MRPL34Q9BQ48 92 aaKnown RBP8.43□□□□□ -1.06
GINS3-203ENST00000426538 ABCA13Q86UQ4 5058 aa8.42□□□□□ -1.06
GINS3-203ENST00000426538 FP248Q71RG6 208 aaPredicted RBP8.41□□□□□ -1.06
GINS3-203ENST00000426538 NDUFS5O43920 106 aa8.4□□□□□ -1.07
GINS3-203ENST00000426538 TRAV7A0A075B6U4 112 aa8.39□□□□□ -1.07
GINS3-203ENST00000426538 SERP2Q8N6R1 65 aa8.39□□□□□ -1.07
GINS3-203ENST00000426538 OCR1Q9BZK8 76 aa8.38□□□□□ -1.07
GINS3-203ENST00000426538 C9orf92A6NGG3 77 aa8.37□□□□□ -1.07
GINS3-203ENST00000426538 IGLV7-46A0A075B6I9 117 aa8.35□□□□□ -1.07
GINS3-203ENST00000426538 COX7CP15954 63 aa8.34□□□□□ -1.07
GINS3-203ENST00000426538 PRR4Q16378 134 aa8.34□□□□□ -1.07
GINS3-203ENST00000426538 TP53AIP1Q9HCN2 124 aa8.34□□□□□ -1.07
GINS3-203ENST00000426538 KRTAP16-1A8MUX0 517 aa8.33□□□□□ -1.08
GINS3-203ENST00000426538 UQCRQO14949 82 aa8.32□□□□□ -1.08
GINS3-203ENST00000426538 Q8N9P0 234 aaPredicted RBP8.32□□□□□ -1.08
GINS3-203ENST00000426538 C5orf47Q569G3 176 aa8.29□□□□□ -1.08
GINS3-203ENST00000426538 CCDC179H3BU77 68 aa8.26□□□□□ -1.09
GINS3-203ENST00000426538 MP68P56378 58 aa8.26□□□□□ -1.09
GINS3-203ENST00000426538 TRAV22A0A0B4J277 110 aa8.25□□□□□ -1.09
GINS3-203ENST00000426538 C20orf197Q8N268 126 aa8.25□□□□□ -1.09
GINS3-203ENST00000426538 KRTAP13-3Q3SY46 172 aa8.24□□□□□ -1.09
GINS3-203ENST00000426538 H0Y9P7 68 aa8.23□□□□□ -1.09
GINS3-203ENST00000426538 C20orf166-AS1Q96NR2 134 aa8.23□□□□□ -1.09
GINS3-203ENST00000426538 A8MUU9 505 aa8.22□□□□□ -1.09
GINS3-203ENST00000426538 TPRXLQ17RH7 258 aa8.2□□□□□ -1.1
GINS3-203ENST00000426538 Q5W150 140 aa8.2□□□□□ -1.1
GINS3-203ENST00000426538 Q75L30 129 aa8.19□□□□□ -1.1
GINS3-203ENST00000426538 LINC00208Q96KT6 92 aa8.19□□□□□ -1.1
GINS3-203ENST00000426538 SNURFQ9Y675 71 aa8.19□□□□□ -1.1
GINS3-203ENST00000426538 H3BPC8 53 aa8.18□□□□□ -1.1
GINS3-203ENST00000426538 XP32Q5T750 250 aa8.17□□□□□ -1.1
GINS3-203ENST00000426538 A0A0U1RQV1 116 aa8.17□□□□□ -1.1
GINS3-203ENST00000426538 KLKP1Q107X0 134 aa8.17□□□□□ -1.1
GINS3-203ENST00000426538 PCLOQ9Y6V0 5065 aa8.16□□□□□ -1.1
GINS3-203ENST00000426538 C1orf64Q8NEQ6 169 aa8.16□□□□□ -1.1
GINS3-203ENST00000426538 ZCCHC13Q8WW36 166 aaKnown RBP8.16□□□□□ -1.1
GINS3-203ENST00000426538 ATP11AUNQ6ZP68 121 aa8.12□□□□□ -1.11
GINS3-203ENST00000426538 RPL37P61927 97 aaKnown RBP8.12□□□□□ -1.11
GINS3-203ENST00000426538 LOC101927531A0A1B0GV80 90 aa8.1□□□□□ -1.11
GINS3-203ENST00000426538 NDUFC1O43677 76 aa8.1□□□□□ -1.11
GINS3-203ENST00000426538 CYSTM1Q9H1C7 97 aa8.09□□□□□ -1.11
GINS3-203ENST00000426538 IGKV2D-30A0A075B6S6 120 aa8.05□□□□□ -1.12
GINS3-203ENST00000426538 IGKV2-30P06310 120 aa8.05□□□□□ -1.12
GINS3-203ENST00000426538 CYP4F30PQ9H0H9 118 aa8.05□□□□□ -1.12
GINS3-203ENST00000426538 LPAP08519 4548 aa8.04□□□□□ -1.12
GINS3-203ENST00000426538 H7BZZ5 65 aa8.04□□□□□ -1.12
GINS3-203ENST00000426538 PCOTHQ58A44 107 aa8.02□□□□□ -1.13
GINS3-203ENST00000426538 C7orf65Q6ZTY9 151 aa8.01□□□□□ -1.13
GINS3-203ENST00000426538 HERC1Q15751 4861 aa7.99□□□□□ -1.13
GINS3-203ENST00000426538 TMEM258P61165 79 aa7.98□□□□□ -1.13
GINS3-203ENST00000426538 LRP2P98164 4655 aa7.97□□□□□ -1.13
GINS3-203ENST00000426538 SPINK7P58062 85 aa7.97□□□□□ -1.13
GINS3-203ENST00000426538 SEC61BP60468 96 aaKnown RBP7.95□□□□□ -1.14
GINS3-203ENST00000426538 SPANXA2-OT1Q8N9U9 137 aa7.92□□□□□ -1.14
GINS3-203ENST00000426538 HRES1P13985 223 aa7.92□□□□□ -1.14
GINS3-203ENST00000426538 SVIPQ8NHG7 77 aa7.91□□□□□ -1.14
GINS3-203ENST00000426538 FAM236DA0A1B0GTK5 79 aa7.9□□□□□ -1.14
GINS3-203ENST00000426538 FAM236CP0DP71 79 aa7.9□□□□□ -1.14
GINS3-203ENST00000426538 ATP5EP56381 51 aaPredicted RBP7.89□□□□□ -1.15
GINS3-203ENST00000426538 HMCN2Q8NDA2 5059 aa7.85□□□□□ -1.15
GINS3-203ENST00000426538 C4orf26Q17RF5 130 aa7.83□□□□□ -1.16
GINS3-203ENST00000426538 DMAC1Q96GE9 116 aa7.77□□□□□ -1.17
GINS3-203ENST00000426538 ACYP2P14621 99 aa7.76□□□□□ -1.17
GINS3-203ENST00000426538 A8MUN3 132 aa7.75□□□□□ -1.17
GINS3-203ENST00000426538 COX6B2Q6YFQ2 88 aa7.75□□□□□ -1.17
GINS3-203ENST00000426538 MUC17Q685J3 4493 aa7.74□□□□□ -1.17
GINS3-203ENST00000426538 RBM12B-AS1Q9P1G2 102 aa7.72□□□□□ -1.17
GINS3-203ENST00000426538 SERP1Q9Y6X1 66 aa7.72□□□□□ -1.17
GINS3-203ENST00000426538 KRTAP4-1Q9BYQ7 146 aa7.7□□□□□ -1.18
GINS3-203ENST00000426538 KRTAP3-1Q9BYR8 98 aa7.69□□□□□ -1.18
GINS3-203ENST00000426538 COA5Q86WW8 74 aa7.68□□□□□ -1.18
GINS3-203ENST00000426538 RPS28P62857 69 aaKnown RBP7.67□□□□□ -1.18
GINS3-203ENST00000426538 MPLKIPQ8TAP9 179 aa7.67□□□□□ -1.18
GINS3-203ENST00000426538 CHKB-CPT1BH3BT56 60 aa7.65□□□□□ -1.18
GINS3-203ENST00000426538 H1FX-AS1Q4G0G2 97 aa7.6□□□□□ -1.19
GINS3-203ENST00000426538 MUC2Q02817 5179 aa7.57□□□□□ -1.2
GINS3-203ENST00000426538 S4R3F8 94 aa7.52□□□□□ -1.2
GINS3-203ENST00000426538 SMIM26A0A096LP01 95 aa7.52□□□□□ -1.21
GINS3-203ENST00000426538 SPTSSBQ8NFR3 76 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms