RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 KALRNO60229 2985 aa5.47□□□□□ -1.53
SP1-202ENST00000426431 TNP1P09430 55 aa5.46□□□□□ -1.53
SP1-202ENST00000426431 EYSQ5T1H1 3165 aa5.46□□□□□ -1.54
SP1-202ENST00000426431 ADGRG4Q8IZF6 3080 aa5.44□□□□□ -1.54
SP1-202ENST00000426431 XIRP2A4UGR9 3374 aa5.43□□□□□ -1.54
SP1-202ENST00000426431 CELSR2Q9HCU4 2923 aa5.43□□□□□ -1.54
SP1-202ENST00000426431 ZANQ9Y493 2812 aa5.41□□□□□ -1.54
SP1-202ENST00000426431 A0A1B0GVY2 172 aa5.41□□□□□ -1.54
SP1-202ENST00000426431 PP632Q6XCG6 107 aa5.41□□□□□ -1.54
SP1-202ENST00000426431 LAMA1P25391 3075 aa5.4□□□□□ -1.54
SP1-202ENST00000426431 DCHS2Q6V1P9 2916 aa5.4□□□□□ -1.55
SP1-202ENST00000426431 UNC80Q8N2C7 3258 aa5.39□□□□□ -1.55
SP1-202ENST00000426431 KRTAP13-3Q3SY46 172 aa5.39□□□□□ -1.55
SP1-202ENST00000426431 KRTAP25-1Q3LHN0 102 aa5.39□□□□□ -1.55
SP1-202ENST00000426431 HRNRQ86YZ3 2850 aaPredicted RBP5.39□□□□□ -1.55
SP1-202ENST00000426431 A6NN06 94 aa5.37□□□□□ -1.55
SP1-202ENST00000426431 CDH23Q9H251 3354 aa5.37□□□□□ -1.55
SP1-202ENST00000426431 KRTAP10-8P60410 259 aa5.36□□□□□ -1.55
SP1-202ENST00000426431 REV3LO60673 3130 aa5.36□□□□□ -1.55
SP1-202ENST00000426431 A8MU10 97 aa5.36□□□□□ -1.55
SP1-202ENST00000426431 KRTAP16-1A8MUX0 517 aa5.36□□□□□ -1.55
SP1-202ENST00000426431 NF1P21359 2839 aa5.36□□□□□ -1.55
SP1-202ENST00000426431 CRYBG3Q68DQ2 2970 aa5.36□□□□□ -1.55
SP1-202ENST00000426431 TENM1Q9UKZ4 2725 aa5.35□□□□□ -1.55
SP1-202ENST00000426431 MXRA5Q9NR99 2828 aa5.33□□□□□ -1.56
SP1-202ENST00000426431 BOD1L1Q8NFC6 3051 aa5.32□□□□□ -1.56
SP1-202ENST00000426431 TENM3Q9P273 2699 aa5.32□□□□□ -1.56
SP1-202ENST00000426431 PRO2289Q9P1D8 64 aa5.32□□□□□ -1.56
SP1-202ENST00000426431 SZT2Q5T011 3432 aa5.3□□□□□ -1.56
SP1-202ENST00000426431 ASH1LQ9NR48 2969 aaKnown RBP5.29□□□□□ -1.56
SP1-202ENST00000426431 DMXL1Q9Y485 3027 aa5.24□□□□□ -1.57
SP1-202ENST00000426431 KRTAP10-10P60014 251 aa5.22□□□□□ -1.57
SP1-202ENST00000426431 TENM2Q9NT68 2774 aa5.22□□□□□ -1.57
SP1-202ENST00000426431 CELSR3Q9NYQ7 3312 aa5.21□□□□□ -1.57
SP1-202ENST00000426431 COL6A3P12111 3177 aa5.21□□□□□ -1.58
SP1-202ENST00000426431 USP34Q70CQ2 3546 aa5.2□□□□□ -1.58
SP1-202ENST00000426431 FBN2P35556 2912 aa5.19□□□□□ -1.58
SP1-202ENST00000426431 VCANP13611 3396 aa5.18□□□□□ -1.58
SP1-202ENST00000426431 PDZD2O15018 2839 aa5.17□□□□□ -1.58
SP1-202ENST00000426431 H3BS24 57 aa5.15□□□□□ -1.59
SP1-202ENST00000426431 H0YAA0 97 aa5.14□□□□□ -1.59
SP1-202ENST00000426431 CELSR1Q9NYQ6 3014 aa5.14□□□□□ -1.59
SP1-202ENST00000426431 FREM2Q5SZK8 3169 aa5.13□□□□□ -1.59
SP1-202ENST00000426431 C10orf95Q9H7T3 257 aa5.07□□□□□ -1.6
SP1-202ENST00000426431 TGP01266 2768 aa5.05□□□□□ -1.6
SP1-202ENST00000426431 P0C880 135 aa5.04□□□□□ -1.6
SP1-202ENST00000426431 SPTBN5Q9NRC6 3674 aaKnown RBP5.03□□□□□ -1.6
SP1-202ENST00000426431 PKD1L1Q8TDX9 2849 aa5.01□□□□□ -1.61
SP1-202ENST00000426431 CFAP47Q6ZTR5 3102 aa5.01□□□□□ -1.61
SP1-202ENST00000426431 DNAH14Q0VDD8 3507 aa5□□□□□ -1.61
SP1-202ENST00000426431 OTOGQ6ZRI0 2925 aa4.99□□□□□ -1.61
SP1-202ENST00000426431 NDUFAF8A1L188 74 aa4.98□□□□□ -1.61
SP1-202ENST00000426431 LOC400499M0QZD8 3231 aa4.94□□□□□ -1.62
SP1-202ENST00000426431 KRTAP13-4Q3LI77 160 aa4.92□□□□□ -1.62
SP1-202ENST00000426431 VWFP04275 2813 aa4.91□□□□□ -1.62
SP1-202ENST00000426431 SPEGQ15772 3267 aa4.9□□□□□ -1.63
SP1-202ENST00000426431 MT1HL1P0DM35 61 aa4.87□□□□□ -1.63
SP1-202ENST00000426431 KRTAP3-1Q9BYR8 98 aa4.83□□□□□ -1.64
SP1-202ENST00000426431 KRTAP12-1P59990 96 aa4.82□□□□□ -1.64
SP1-202ENST00000426431 KRTAP12-2P59991 146 aa4.81□□□□□ -1.64
SP1-202ENST00000426431 FBN1P35555 2871 aaKnown RBP4.78□□□□□ -1.64
SP1-202ENST00000426431 ANK3Q12955 4377 aaKnown RBP4.77□□□□□ -1.65
SP1-202ENST00000426431 DCHS1Q96JQ0 3298 aa4.77□□□□□ -1.65
SP1-202ENST00000426431 KRTAP10-4P60372 401 aaPredicted RBP4.77□□□□□ -1.65
SP1-202ENST00000426431 NBPF19A0A087WUL8 3843 aa4.73□□□□□ -1.65
SP1-202ENST00000426431 MEGF8Q7Z7M0 2845 aa4.71□□□□□ -1.66
SP1-202ENST00000426431 KRTAP10-6P60371 365 aaPredicted RBP4.71□□□□□ -1.66
SP1-202ENST00000426431 FBN3Q75N90 2809 aa4.7□□□□□ -1.66
SP1-202ENST00000426431 RELNP78509 3460 aa4.67□□□□□ -1.66
SP1-202ENST00000426431 MYO15AQ9UKN7 3530 aa4.66□□□□□ -1.66
SP1-202ENST00000426431 ALMS1Q8TCU4 4167 aa4.66□□□□□ -1.66
SP1-202ENST00000426431 WDFY3Q8IZQ1 3526 aa4.64□□□□□ -1.67
SP1-202ENST00000426431 SRRM2Q9UQ35 2752 aaKnown RBP4.63□□□□□ -1.67
SP1-202ENST00000426431 ZFHX3Q15911 3703 aa4.61□□□□□ -1.67
SP1-202ENST00000426431 KRTAP15-1Q3LI76 137 aa4.61□□□□□ -1.67
SP1-202ENST00000426431 KRTAP23-1A1A580 65 aa4.59□□□□□ -1.67
SP1-202ENST00000426431 COL7A1Q02388 2944 aa4.58□□□□□ -1.68
SP1-202ENST00000426431 KRTAP3-3Q9BYR6 98 aa4.56□□□□□ -1.68
SP1-202ENST00000426431 HUWE1Q7Z6Z7 4374 aaKnown RBP4.55□□□□□ -1.68
SP1-202ENST00000426431 KRTAP4-5Q9BYR2 181 aa4.55□□□□□ -1.68
SP1-202ENST00000426431 KRTAP3-2Q9BYR7 98 aa4.55□□□□□ -1.68
SP1-202ENST00000426431 KRTAP10-12P60413 245 aa4.53□□□□□ -1.68
SP1-202ENST00000426431 TRRAPQ9Y4A5 3859 aa4.47□□□□□ -1.69
SP1-202ENST00000426431 LAMA5O15230 3695 aa4.46□□□□□ -1.69
SP1-202ENST00000426431 ASPMQ8IZT6 3477 aa4.44□□□□□ -1.7
SP1-202ENST00000426431 ZFHX4Q86UP3 3567 aa4.42□□□□□ -1.7
SP1-202ENST00000426431 DNAH1Q9P2D7 4330 aa4.41□□□□□ -1.7
SP1-202ENST00000426431 KRTAP12-3P60328 96 aa4.37□□□□□ -1.71
SP1-202ENST00000426431 INE1O15225 51 aa4.36□□□□□ -1.71
SP1-202ENST00000426431 DNAH9Q9NYC9 4486 aa4.31□□□□□ -1.72
SP1-202ENST00000426431 DNAH10Q8IVF4 4471 aa4.31□□□□□ -1.72
SP1-202ENST00000426431 CUBNO60494 3623 aa4.31□□□□□ -1.72
SP1-202ENST00000426431 BSNQ9UPA5 3926 aa4.28□□□□□ -1.72
SP1-202ENST00000426431 CSMD1Q96PZ7 3565 aa4.28□□□□□ -1.72
SP1-202ENST00000426431 SMG1Q96Q15 3661 aaKnown RBP4.27□□□□□ -1.73
SP1-202ENST00000426431 MUC3AQ02505 3323 aa4.27□□□□□ -1.73
SP1-202ENST00000426431 DMDP11532 3685 aa4.27□□□□□ -1.73
SP1-202ENST00000426431 SPENQ96T58 3664 aaKnown RBP4.27□□□□□ -1.73
SP1-202ENST00000426431 DNAH11Q96DT5 4516 aa4.27□□□□□ -1.73
SP1-202ENST00000426431 CSMD2Q7Z408 3487 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms