RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 COL12A1Q99715 3063 aa9.24□□□□□ -0.93
SYNGAP1-202ENST00000418600 DNAH14Q0VDD8 3507 aa9.21□□□□□ -0.94
SYNGAP1-202ENST00000418600 LAMA2P24043 3122 aaKnown RBP9.21□□□□□ -0.94
SYNGAP1-202ENST00000418600 KRTAP10-10P60014 251 aa9.2□□□□□ -0.94
SYNGAP1-202ENST00000418600 USP34Q70CQ2 3546 aa9.19□□□□□ -0.94
SYNGAP1-202ENST00000418600 REV3LO60673 3130 aa9.17□□□□□ -0.94
SYNGAP1-202ENST00000418600 TNP1P09430 55 aa9.16□□□□□ -0.94
SYNGAP1-202ENST00000418600 NBEAL2Q6ZNJ1 2754 aa9.14□□□□□ -0.95
SYNGAP1-202ENST00000418600 VPS13AQ96RL7 3174 aa9.13□□□□□ -0.95
SYNGAP1-202ENST00000418600 LRBAP50851 2863 aa9.12□□□□□ -0.95
SYNGAP1-202ENST00000418600 KRTAP25-1Q3LHN0 102 aa9.1□□□□□ -0.95
SYNGAP1-202ENST00000418600 NBEAQ8NFP9 2946 aa9.1□□□□□ -0.95
SYNGAP1-202ENST00000418600 DMXL1Q9Y485 3027 aa9.08□□□□□ -0.96
SYNGAP1-202ENST00000418600 KRTAP16-1A8MUX0 517 aa9.07□□□□□ -0.96
SYNGAP1-202ENST00000418600 KRTAP13-3Q3SY46 172 aa9.07□□□□□ -0.96
SYNGAP1-202ENST00000418600 TACC2O95359 2948 aa9.06□□□□□ -0.96
SYNGAP1-202ENST00000418600 KRTAP10-8P60410 259 aa9.05□□□□□ -0.96
SYNGAP1-202ENST00000418600 DMBT1Q9UGM3 2413 aaPredicted RBP9.05□□□□□ -0.96
SYNGAP1-202ENST00000418600 A8MU10 97 aa9.03□□□□□ -0.96
SYNGAP1-202ENST00000418600 CELSR3Q9NYQ7 3312 aa9.02□□□□□ -0.97
SYNGAP1-202ENST00000418600 LAMA1P25391 3075 aa8.99□□□□□ -0.97
SYNGAP1-202ENST00000418600 PRO2289Q9P1D8 64 aa8.97□□□□□ -0.97
SYNGAP1-202ENST00000418600 VCANP13611 3396 aa8.96□□□□□ -0.98
SYNGAP1-202ENST00000418600 BOD1L1Q8NFC6 3051 aa8.94□□□□□ -0.98
SYNGAP1-202ENST00000418600 ASH1LQ9NR48 2969 aaKnown RBP8.94□□□□□ -0.98
SYNGAP1-202ENST00000418600 PP632Q6XCG6 107 aa8.93□□□□□ -0.98
SYNGAP1-202ENST00000418600 A6NN06 94 aa8.92□□□□□ -0.98
SYNGAP1-202ENST00000418600 TENM2Q9NT68 2774 aa8.88□□□□□ -0.99
SYNGAP1-202ENST00000418600 KALRNO60229 2985 aa8.87□□□□□ -0.99
SYNGAP1-202ENST00000418600 C10orf95Q9H7T3 257 aa8.85□□□□□ -0.99
SYNGAP1-202ENST00000418600 FREM2Q5SZK8 3169 aa8.81□□□□□ -1
SYNGAP1-202ENST00000418600 ZZEF1O43149 2961 aa8.79□□□□□ -1
SYNGAP1-202ENST00000418600 NBPF19A0A087WUL8 3843 aa8.78□□□□□ -1
SYNGAP1-202ENST00000418600 ADGRG4Q8IZF6 3080 aa8.75□□□□□ -1.01
SYNGAP1-202ENST00000418600 NIPBLQ6KC79 2804 aaeCLIP8.75□□□□□ -1.01
SYNGAP1-202ENST00000418600 NDUFAF8A1L188 74 aa8.74□□□□□ -1.01
SYNGAP1-202ENST00000418600 PDZD2O15018 2839 aa8.74□□□□□ -1.01
SYNGAP1-202ENST00000418600 HRNRQ86YZ3 2850 aaPredicted RBP8.73□□□□□ -1.01
SYNGAP1-202ENST00000418600 CELSR2Q9HCU4 2923 aa8.71□□□□□ -1.01
SYNGAP1-202ENST00000418600 ANK3Q12955 4377 aaKnown RBP8.71□□□□□ -1.02
SYNGAP1-202ENST00000418600 CFAP47Q6ZTR5 3102 aa8.66□□□□□ -1.02
SYNGAP1-202ENST00000418600 FBN2P35556 2912 aa8.65□□□□□ -1.02
SYNGAP1-202ENST00000418600 MYO15AQ9UKN7 3530 aa8.65□□□□□ -1.02
SYNGAP1-202ENST00000418600 SPEGQ15772 3267 aa8.64□□□□□ -1.03
SYNGAP1-202ENST00000418600 NF1P21359 2839 aa8.63□□□□□ -1.03
SYNGAP1-202ENST00000418600 DCHS2Q6V1P9 2916 aa8.59□□□□□ -1.03
SYNGAP1-202ENST00000418600 MXRA5Q9NR99 2828 aa8.59□□□□□ -1.03
SYNGAP1-202ENST00000418600 ALMS1Q8TCU4 4167 aa8.56□□□□□ -1.04
SYNGAP1-202ENST00000418600 TENM1Q9UKZ4 2725 aa8.53□□□□□ -1.04
SYNGAP1-202ENST00000418600 ZANQ9Y493 2812 aa8.52□□□□□ -1.05
SYNGAP1-202ENST00000418600 KRTAP4-5Q9BYR2 181 aa8.5□□□□□ -1.05
SYNGAP1-202ENST00000418600 OTOGQ6ZRI0 2925 aa8.49□□□□□ -1.05
SYNGAP1-202ENST00000418600 P0C880 135 aa8.44□□□□□ -1.06
SYNGAP1-202ENST00000418600 TENM3Q9P273 2699 aa8.43□□□□□ -1.06
SYNGAP1-202ENST00000418600 ASPMQ8IZT6 3477 aa8.39□□□□□ -1.07
SYNGAP1-202ENST00000418600 MT1HL1P0DM35 61 aa8.38□□□□□ -1.07
SYNGAP1-202ENST00000418600 DMDP11532 3685 aa8.38□□□□□ -1.07
SYNGAP1-202ENST00000418600 WDFY3Q8IZQ1 3526 aa8.38□□□□□ -1.07
SYNGAP1-202ENST00000418600 LOC400499M0QZD8 3231 aa8.37□□□□□ -1.07
SYNGAP1-202ENST00000418600 H0YAA0 97 aa8.35□□□□□ -1.07
SYNGAP1-202ENST00000418600 CELSR1Q9NYQ6 3014 aa8.32□□□□□ -1.08
SYNGAP1-202ENST00000418600 RELNP78509 3460 aa8.32□□□□□ -1.08
SYNGAP1-202ENST00000418600 FBN1P35555 2871 aaKnown RBP8.29□□□□□ -1.08
SYNGAP1-202ENST00000418600 ZFHX3Q15911 3703 aa8.25□□□□□ -1.09
SYNGAP1-202ENST00000418600 HUWE1Q7Z6Z7 4374 aaKnown RBP8.18□□□□□ -1.1
SYNGAP1-202ENST00000418600 LAMA5O15230 3695 aa8.16□□□□□ -1.1
SYNGAP1-202ENST00000418600 PKD1L1Q8TDX9 2849 aa8.16□□□□□ -1.1
SYNGAP1-202ENST00000418600 FBN3Q75N90 2809 aa8.15□□□□□ -1.11
SYNGAP1-202ENST00000418600 DCHS1Q96JQ0 3298 aa8.14□□□□□ -1.11
SYNGAP1-202ENST00000418600 ZFHX4Q86UP3 3567 aa8.13□□□□□ -1.11
SYNGAP1-202ENST00000418600 KRTAP10-4P60372 401 aaPredicted RBP8.05□□□□□ -1.12
SYNGAP1-202ENST00000418600 VWFP04275 2813 aa8.03□□□□□ -1.12
SYNGAP1-202ENST00000418600 KRTAP13-4Q3LI77 160 aa8.01□□□□□ -1.13
SYNGAP1-202ENST00000418600 MUC3AQ02505 3323 aa7.97□□□□□ -1.13
SYNGAP1-202ENST00000418600 BSNQ9UPA5 3926 aa7.97□□□□□ -1.13
SYNGAP1-202ENST00000418600 CSMD1Q96PZ7 3565 aa7.95□□□□□ -1.14
SYNGAP1-202ENST00000418600 TGP01266 2768 aa7.89□□□□□ -1.15
SYNGAP1-202ENST00000418600 KRTAP12-2P59991 146 aa7.89□□□□□ -1.15
SYNGAP1-202ENST00000418600 SMG1Q96Q15 3661 aaKnown RBP7.89□□□□□ -1.15
SYNGAP1-202ENST00000418600 SPENQ96T58 3664 aaKnown RBP7.81□□□□□ -1.16
SYNGAP1-202ENST00000418600 DNAH9Q9NYC9 4486 aa7.81□□□□□ -1.16
SYNGAP1-202ENST00000418600 AKAP9Q99996 3911 aa7.81□□□□□ -1.16
SYNGAP1-202ENST00000418600 KRTAP15-1Q3LI76 137 aa7.79□□□□□ -1.16
SYNGAP1-202ENST00000418600 CSMD2Q7Z408 3487 aa7.79□□□□□ -1.16
SYNGAP1-202ENST00000418600 TRRAPQ9Y4A5 3859 aa7.78□□□□□ -1.16
SYNGAP1-202ENST00000418600 KRTAP12-1P59990 96 aa7.77□□□□□ -1.17
SYNGAP1-202ENST00000418600 DNAH1Q9P2D7 4330 aa7.74□□□□□ -1.17
SYNGAP1-202ENST00000418600 KRTAP3-1Q9BYR8 98 aa7.74□□□□□ -1.17
SYNGAP1-202ENST00000418600 SVEP1Q4LDE5 3571 aa7.6□□□□□ -1.19
SYNGAP1-202ENST00000418600 LORP23490 312 aaPredicted RBP7.58□□□□□ -1.2
SYNGAP1-202ENST00000418600 KRTAP10-12P60413 245 aa7.57□□□□□ -1.2
SYNGAP1-202ENST00000418600 DNAH11Q96DT5 4516 aa7.55□□□□□ -1.2
SYNGAP1-202ENST00000418600 CRCT1Q9UGL9 99 aa7.55□□□□□ -1.2
SYNGAP1-202ENST00000418600 KRTAP8-1Q8IUC2 63 aa7.48□□□□□ -1.21
SYNGAP1-202ENST00000418600 MT1HP80294 61 aa7.46□□□□□ -1.21
SYNGAP1-202ENST00000418600 DNAH5Q8TE73 4624 aa7.44□□□□□ -1.22
SYNGAP1-202ENST00000418600 CUBNO60494 3623 aa7.43□□□□□ -1.22
SYNGAP1-202ENST00000418600 DNAH10Q8IVF4 4471 aa7.42□□□□□ -1.22
SYNGAP1-202ENST00000418600 MEGF8Q7Z7M0 2845 aa7.42□□□□□ -1.22
SYNGAP1-202ENST00000418600 INE1O15225 51 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms