RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 TNP1P09430 55 aa5.75□□□□□ -1.49
SATB1-204ENST00000417717 ITPR1Q14643 2758 aa5.74□□□□□ -1.49
SATB1-204ENST00000417717 KMT2BQ9UMN6 2715 aaPredicted RBP5.73□□□□□ -1.49
SATB1-204ENST00000417717 APCP25054 2843 aa5.73□□□□□ -1.49
SATB1-204ENST00000417717 UTP20O75691 2785 aaKnown RBP5.73□□□□□ -1.49
SATB1-204ENST00000417717 DMDP11532 3685 aa5.73□□□□□ -1.49
SATB1-204ENST00000417717 TEP1Q99973 2627 aaKnown RBP5.73□□□□□ -1.49
SATB1-204ENST00000417717 ASPMQ8IZT6 3477 aa5.72□□□□□ -1.49
SATB1-204ENST00000417717 SETXQ7Z333 2677 aaKnown RBP5.71□□□□□ -1.5
SATB1-204ENST00000417717 CFAP47Q6ZTR5 3102 aa5.7□□□□□ -1.5
SATB1-204ENST00000417717 KALRNO60229 2985 aa5.69□□□□□ -1.5
SATB1-204ENST00000417717 COL12A1Q99715 3063 aa5.69□□□□□ -1.5
SATB1-204ENST00000417717 LRBAP50851 2863 aa5.68□□□□□ -1.5
SATB1-204ENST00000417717 GCN1Q92616 2671 aaKnown RBP5.67□□□□□ -1.5
SATB1-204ENST00000417717 COL6A5A8TX70 2615 aa5.67□□□□□ -1.5
SATB1-204ENST00000417717 RPS29P62273 56 aaKnown RBP5.66□□□□□ -1.5
SATB1-204ENST00000417717 ITPR2Q14571 2701 aa5.66□□□□□ -1.5
SATB1-204ENST00000417717 NSD1Q96L73 2696 aaPredicted RBP5.63□□□□□ -1.51
SATB1-204ENST00000417717 DCHS1Q96JQ0 3298 aa5.63□□□□□ -1.51
SATB1-204ENST00000417717 KRTAP1-5Q9BYS1 174 aa5.63□□□□□ -1.51
SATB1-204ENST00000417717 M0R2T5 61 aa5.62□□□□□ -1.51
SATB1-204ENST00000417717 SPENQ96T58 3664 aaKnown RBP5.61□□□□□ -1.51
SATB1-204ENST00000417717 KRTAP10-8P60410 259 aa5.61□□□□□ -1.51
SATB1-204ENST00000417717 KRTAP7-1Q8IUC3 87 aa5.61□□□□□ -1.51
SATB1-204ENST00000417717 HIVEP1P15822 2718 aa5.61□□□□□ -1.51
SATB1-204ENST00000417717 BAHCC1Q9P281 2608 aa5.6□□□□□ -1.51
SATB1-204ENST00000417717 KRTAP13-1Q8IUC0 172 aa5.6□□□□□ -1.51
SATB1-204ENST00000417717 KRTAP21-3Q3LHN1 58 aa5.59□□□□□ -1.51
SATB1-204ENST00000417717 ZZEF1O43149 2961 aa5.59□□□□□ -1.51
SATB1-204ENST00000417717 LAMA5O15230 3695 aa5.59□□□□□ -1.52
SATB1-204ENST00000417717 ZFHX4Q86UP3 3567 aa5.56□□□□□ -1.52
SATB1-204ENST00000417717 ZANQ9Y493 2812 aa5.56□□□□□ -1.52
SATB1-204ENST00000417717 TACC2O95359 2948 aa5.53□□□□□ -1.52
SATB1-204ENST00000417717 FBN2P35556 2912 aa5.51□□□□□ -1.53
SATB1-204ENST00000417717 NBEAL2Q6ZNJ1 2754 aa5.5□□□□□ -1.53
SATB1-204ENST00000417717 ASH1LQ9NR48 2969 aaKnown RBP5.49□□□□□ -1.53
SATB1-204ENST00000417717 PDZD2O15018 2839 aa5.49□□□□□ -1.53
SATB1-204ENST00000417717 Q6ZRN7 208 aaPredicted RBP5.49□□□□□ -1.53
SATB1-204ENST00000417717 SMG1Q96Q15 3661 aaKnown RBP5.48□□□□□ -1.53
SATB1-204ENST00000417717 CELSR2Q9HCU4 2923 aa5.48□□□□□ -1.53
SATB1-204ENST00000417717 DCHS2Q6V1P9 2916 aa5.46□□□□□ -1.53
SATB1-204ENST00000417717 NIPBLQ6KC79 2804 aaeCLIP5.46□□□□□ -1.54
SATB1-204ENST00000417717 TPRXLQ17RH7 258 aa5.45□□□□□ -1.54
SATB1-204ENST00000417717 MXRA5Q9NR99 2828 aa5.45□□□□□ -1.54
SATB1-204ENST00000417717 KRTAP13-2Q52LG2 175 aa5.45□□□□□ -1.54
SATB1-204ENST00000417717 INE1O15225 51 aa5.44□□□□□ -1.54
SATB1-204ENST00000417717 KRTAP10-1P60331 282 aa5.42□□□□□ -1.54
SATB1-204ENST00000417717 RELNP78509 3460 aa5.41□□□□□ -1.54
SATB1-204ENST00000417717 PRO2289Q9P1D8 64 aa5.4□□□□□ -1.54
SATB1-204ENST00000417717 CRYBG3Q68DQ2 2970 aa5.4□□□□□ -1.55
SATB1-204ENST00000417717 TENM4Q6N022 2769 aa5.39□□□□□ -1.55
SATB1-204ENST00000417717 KRTAP15-1Q3LI76 137 aa5.38□□□□□ -1.55
SATB1-204ENST00000417717 NF1P21359 2839 aa5.36□□□□□ -1.55
SATB1-204ENST00000417717 KRTAP13-3Q3SY46 172 aa5.36□□□□□ -1.55
SATB1-204ENST00000417717 KRTAP10-2P60368 255 aa5.35□□□□□ -1.55
SATB1-204ENST00000417717 BSNQ9UPA5 3926 aa5.33□□□□□ -1.56
SATB1-204ENST00000417717 CSMD1Q96PZ7 3565 aa5.31□□□□□ -1.56
SATB1-204ENST00000417717 OTOGQ6ZRI0 2925 aa5.27□□□□□ -1.57
SATB1-204ENST00000417717 KRTAP12-2P59991 146 aa5.25□□□□□ -1.57
SATB1-204ENST00000417717 SVEP1Q4LDE5 3571 aa5.25□□□□□ -1.57
SATB1-204ENST00000417717 Q5VSD8 79 aa5.24□□□□□ -1.57
SATB1-204ENST00000417717 KRTAP13-4Q3LI77 160 aa5.24□□□□□ -1.57
SATB1-204ENST00000417717 ANK3Q12955 4377 aaKnown RBP5.23□□□□□ -1.57
SATB1-204ENST00000417717 ZFHX3Q15911 3703 aa5.23□□□□□ -1.57
SATB1-204ENST00000417717 KRTAP12-1P59990 96 aa5.21□□□□□ -1.58
SATB1-204ENST00000417717 CUBNO60494 3623 aa5.19□□□□□ -1.58
SATB1-204ENST00000417717 TENM1Q9UKZ4 2725 aa5.16□□□□□ -1.58
SATB1-204ENST00000417717 TGP01266 2768 aa5.15□□□□□ -1.59
SATB1-204ENST00000417717 XP32Q5T750 250 aa5.13□□□□□ -1.59
SATB1-204ENST00000417717 TENM3Q9P273 2699 aa5.12□□□□□ -1.59
SATB1-204ENST00000417717 KRTAP23-1A1A580 65 aa5.11□□□□□ -1.59
SATB1-204ENST00000417717 CELSR1Q9NYQ6 3014 aa5.11□□□□□ -1.59
SATB1-204ENST00000417717 KRTAP1-4P0C5Y4 121 aa5.09□□□□□ -1.59
SATB1-204ENST00000417717 VPS13CQ709C8 3753 aa5.08□□□□□ -1.6
SATB1-204ENST00000417717 VWFP04275 2813 aa5.07□□□□□ -1.6
SATB1-204ENST00000417717 CSMD2Q7Z408 3487 aa5.04□□□□□ -1.6
SATB1-204ENST00000417717 NBPF19A0A087WUL8 3843 aa5.01□□□□□ -1.61
SATB1-204ENST00000417717 FBN1P35555 2871 aaKnown RBP5□□□□□ -1.61
SATB1-204ENST00000417717 KRTAP10-6P60371 365 aaPredicted RBP4.97□□□□□ -1.61
SATB1-204ENST00000417717 KRTAP3-1Q9BYR8 98 aa4.94□□□□□ -1.62
SATB1-204ENST00000417717 A0A1B0GVY2 172 aa4.92□□□□□ -1.62
SATB1-204ENST00000417717 AKAP9Q99996 3911 aa4.89□□□□□ -1.63
SATB1-204ENST00000417717 TENM2Q9NT68 2774 aa4.88□□□□□ -1.63
SATB1-204ENST00000417717 PKD1L1Q8TDX9 2849 aa4.84□□□□□ -1.63
SATB1-204ENST00000417717 SRRM2Q9UQ35 2752 aaKnown RBP4.82□□□□□ -1.64
SATB1-204ENST00000417717 TRRAPQ9Y4A5 3859 aa4.82□□□□□ -1.64
SATB1-204ENST00000417717 ZNF469Q96JG9 3925 aaPredicted RBP4.8□□□□□ -1.64
SATB1-204ENST00000417717 HUWE1Q7Z6Z7 4374 aaKnown RBP4.79□□□□□ -1.64
SATB1-204ENST00000417717 KRTAP10-10P60014 251 aa4.77□□□□□ -1.65
SATB1-204ENST00000417717 KRTAP3-2Q9BYR7 98 aa4.73□□□□□ -1.65
SATB1-204ENST00000417717 FBN3Q75N90 2809 aa4.71□□□□□ -1.66
SATB1-204ENST00000417717 DNAH9Q9NYC9 4486 aa4.69□□□□□ -1.66
SATB1-204ENST00000417717 ALMS1Q8TCU4 4167 aa4.64□□□□□ -1.67
SATB1-204ENST00000417717 MEGF8Q7Z7M0 2845 aa4.62□□□□□ -1.67
SATB1-204ENST00000417717 KRTAP10-4P60372 401 aaPredicted RBP4.62□□□□□ -1.67
SATB1-204ENST00000417717 KRTAP3-3Q9BYR6 98 aa4.6□□□□□ -1.67
SATB1-204ENST00000417717 DNAH3Q8TD57 4116 aa4.59□□□□□ -1.68
SATB1-204ENST00000417717 VPS13DQ5THJ4 4388 aa4.56□□□□□ -1.68
SATB1-204ENST00000417717 ANK2Q01484 3957 aa4.55□□□□□ -1.68
SATB1-204ENST00000417717 LCE2DQ5TA82 110 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms