RNA–Protein interactions for RNA: ENST00000415495.5

CEACAM3-203, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

TSL 1 (best)

Gene CEACAM3, Length 1,640 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-203ENST00000415495 NDUFB1O75438 58 aa12.1□□□□□ -0.47
CEACAM3-203ENST00000415495 FAM236AA0A1B0GUQ0 79 aa12.08□□□□□ -0.48
CEACAM3-203ENST00000415495 FAM236BA0A1B0GV22 79 aa12.08□□□□□ -0.48
CEACAM3-203ENST00000415495 A0A1B0GVX0 72 aa12.08□□□□□ -0.48
CEACAM3-203ENST00000415495 KRTAP29-1A8MX34 341 aaPredicted RBP12.08□□□□□ -0.48
CEACAM3-203ENST00000415495 IGHV6-1A0A0B4J1U7 121 aa12.03□□□□□ -0.48
CEACAM3-203ENST00000415495 HCG22E2RYF7 251 aa12.02□□□□□ -0.49
CEACAM3-203ENST00000415495 MMP24-AS1A0A0U1RRL7 71 aa12.01□□□□□ -0.49
CEACAM3-203ENST00000415495 NOTCH2NLQ7Z3S9 236 aa12.01□□□□□ -0.49
CEACAM3-203ENST00000415495 C8orf17Q9NRJ1 99 aa12□□□□□ -0.49
CEACAM3-203ENST00000415495 DMBT1Q9UGM3 2413 aaPredicted RBP12□□□□□ -0.49
CEACAM3-203ENST00000415495 RETNLBQ9BQ08 111 aa11.98□□□□□ -0.49
CEACAM3-203ENST00000415495 WFDC13Q8IUB5 93 aa11.97□□□□□ -0.49
CEACAM3-203ENST00000415495 CASC2Q6XLA1 102 aa11.95□□□□□ -0.5
CEACAM3-203ENST00000415495 C8orf87E5RJ46 101 aa11.94□□□□□ -0.5
CEACAM3-203ENST00000415495 hDV103S1A0JD37 113 aa11.92□□□□□ -0.5
CEACAM3-203ENST00000415495 ATOX1O00244 68 aa11.92□□□□□ -0.5
CEACAM3-203ENST00000415495 LINC00313P59037 77 aa11.91□□□□□ -0.5
CEACAM3-203ENST00000415495 TMEM254Q8TBM7 123 aa11.86□□□□□ -0.51
CEACAM3-203ENST00000415495 KRTAP16-1A8MUX0 517 aa11.86□□□□□ -0.51
CEACAM3-203ENST00000415495 FP248Q71RG6 208 aaPredicted RBP11.86□□□□□ -0.51
CEACAM3-203ENST00000415495 MRPL34Q9BQ48 92 aaKnown RBP11.85□□□□□ -0.51
CEACAM3-203ENST00000415495 OCR1Q9BZK8 76 aa11.85□□□□□ -0.51
CEACAM3-203ENST00000415495 ANAPC13Q9BS18 74 aa11.84□□□□□ -0.51
CEACAM3-203ENST00000415495 J3QL48 77 aa11.83□□□□□ -0.52
CEACAM3-203ENST00000415495 SMIM20Q8N5G0 67 aa11.81□□□□□ -0.52
CEACAM3-203ENST00000415495 TRAV7A0A075B6U4 112 aa11.79□□□□□ -0.52
CEACAM3-203ENST00000415495 SERP2Q8N6R1 65 aa11.78□□□□□ -0.52
CEACAM3-203ENST00000415495 PCLOQ9Y6V0 5065 aa11.77□□□□□ -0.52
CEACAM3-203ENST00000415495 PCP4P48539 62 aa11.77□□□□□ -0.53
CEACAM3-203ENST00000415495 IGLV7-46A0A075B6I9 117 aa11.76□□□□□ -0.53
CEACAM3-203ENST00000415495 Q8N9P0 234 aaPredicted RBP11.76□□□□□ -0.53
CEACAM3-203ENST00000415495 C9orf92A6NGG3 77 aa11.75□□□□□ -0.53
CEACAM3-203ENST00000415495 COX7CP15954 63 aa11.72□□□□□ -0.53
CEACAM3-203ENST00000415495 NDUFS5O43920 106 aa11.7□□□□□ -0.54
CEACAM3-203ENST00000415495 PRR4Q16378 134 aa11.7□□□□□ -0.54
CEACAM3-203ENST00000415495 UQCRQO14949 82 aa11.69□□□□□ -0.54
CEACAM3-203ENST00000415495 KRTAP13-3Q3SY46 172 aa11.69□□□□□ -0.54
CEACAM3-203ENST00000415495 TP53AIP1Q9HCN2 124 aa11.69□□□□□ -0.54
CEACAM3-203ENST00000415495 C20orf166-AS1Q96NR2 134 aa11.64□□□□□ -0.55
CEACAM3-203ENST00000415495 A8MUU9 505 aa11.64□□□□□ -0.55
CEACAM3-203ENST00000415495 CCDC179H3BU77 68 aa11.63□□□□□ -0.55
CEACAM3-203ENST00000415495 C5orf47Q569G3 176 aa11.62□□□□□ -0.55
CEACAM3-203ENST00000415495 Q5W150 140 aa11.61□□□□□ -0.55
CEACAM3-203ENST00000415495 TRAV22A0A0B4J277 110 aa11.57□□□□□ -0.56
CEACAM3-203ENST00000415495 TPRXLQ17RH7 258 aa11.57□□□□□ -0.56
CEACAM3-203ENST00000415495 H0Y9P7 68 aa11.56□□□□□ -0.56
CEACAM3-203ENST00000415495 XP32Q5T750 250 aa11.56□□□□□ -0.56
CEACAM3-203ENST00000415495 Q75L30 129 aa11.56□□□□□ -0.56
CEACAM3-203ENST00000415495 C20orf197Q8N268 126 aa11.56□□□□□ -0.56
CEACAM3-203ENST00000415495 A0A0U1RQV1 116 aa11.53□□□□□ -0.56
CEACAM3-203ENST00000415495 MP68P56378 58 aa11.52□□□□□ -0.57
CEACAM3-203ENST00000415495 KLKP1Q107X0 134 aa11.49□□□□□ -0.57
CEACAM3-203ENST00000415495 ZCCHC13Q8WW36 166 aaKnown RBP11.49□□□□□ -0.57
CEACAM3-203ENST00000415495 SNURFQ9Y675 71 aa11.49□□□□□ -0.57
CEACAM3-203ENST00000415495 H3BPC8 53 aa11.48□□□□□ -0.57
CEACAM3-203ENST00000415495 LINC00208Q96KT6 92 aa11.48□□□□□ -0.57
CEACAM3-203ENST00000415495 CYSTM1Q9H1C7 97 aa11.48□□□□□ -0.57
CEACAM3-203ENST00000415495 RPL37P61927 97 aaKnown RBP11.47□□□□□ -0.57
CEACAM3-203ENST00000415495 C1orf64Q8NEQ6 169 aa11.45□□□□□ -0.58
CEACAM3-203ENST00000415495 LPAP08519 4548 aa11.42□□□□□ -0.58
CEACAM3-203ENST00000415495 HERC1Q15751 4861 aa11.4□□□□□ -0.58
CEACAM3-203ENST00000415495 LOC101927531A0A1B0GV80 90 aa11.37□□□□□ -0.59
CEACAM3-203ENST00000415495 IGKV2-30P06310 120 aa11.37□□□□□ -0.59
CEACAM3-203ENST00000415495 ATP11AUNQ6ZP68 121 aa11.36□□□□□ -0.59
CEACAM3-203ENST00000415495 CYP4F30PQ9H0H9 118 aa11.35□□□□□ -0.59
CEACAM3-203ENST00000415495 H7BZZ5 65 aa11.34□□□□□ -0.59
CEACAM3-203ENST00000415495 LRP2P98164 4655 aa11.34□□□□□ -0.59
CEACAM3-203ENST00000415495 NDUFC1O43677 76 aa11.31□□□□□ -0.6
CEACAM3-203ENST00000415495 HMCN2Q8NDA2 5059 aa11.3□□□□□ -0.6
CEACAM3-203ENST00000415495 IGKV2D-30A0A075B6S6 120 aa11.28□□□□□ -0.6
CEACAM3-203ENST00000415495 PCOTHQ58A44 107 aa11.26□□□□□ -0.61
CEACAM3-203ENST00000415495 C7orf65Q6ZTY9 151 aa11.24□□□□□ -0.61
CEACAM3-203ENST00000415495 SPINK7P58062 85 aa11.23□□□□□ -0.61
CEACAM3-203ENST00000415495 SEC61BP60468 96 aaKnown RBP11.17□□□□□ -0.62
CEACAM3-203ENST00000415495 TMEM258P61165 79 aa11.17□□□□□ -0.62
CEACAM3-203ENST00000415495 HRES1P13985 223 aa11.15□□□□□ -0.62
CEACAM3-203ENST00000415495 SPANXA2-OT1Q8N9U9 137 aa11.13□□□□□ -0.63
CEACAM3-203ENST00000415495 MUC17Q685J3 4493 aa11.1□□□□□ -0.63
CEACAM3-203ENST00000415495 SVIPQ8NHG7 77 aa11.09□□□□□ -0.63
CEACAM3-203ENST00000415495 FAM236DA0A1B0GTK5 79 aa11.07□□□□□ -0.64
CEACAM3-203ENST00000415495 FAM236CP0DP71 79 aa11.07□□□□□ -0.64
CEACAM3-203ENST00000415495 C4orf26Q17RF5 130 aa11.02□□□□□ -0.64
CEACAM3-203ENST00000415495 KRTAP4-1Q9BYQ7 146 aa11.02□□□□□ -0.64
CEACAM3-203ENST00000415495 ATP5EP56381 51 aaPredicted RBP11.02□□□□□ -0.65
CEACAM3-203ENST00000415495 DMAC1Q96GE9 116 aa10.95□□□□□ -0.66
CEACAM3-203ENST00000415495 KRTAP3-1Q9BYR8 98 aa10.95□□□□□ -0.66
CEACAM3-203ENST00000415495 MPLKIPQ8TAP9 179 aa10.94□□□□□ -0.66
CEACAM3-203ENST00000415495 COX6B2Q6YFQ2 88 aa10.91□□□□□ -0.66
CEACAM3-203ENST00000415495 A8MUN3 132 aa10.85□□□□□ -0.67
CEACAM3-203ENST00000415495 ACYP2P14621 99 aa10.85□□□□□ -0.67
CEACAM3-203ENST00000415495 SERP1Q9Y6X1 66 aa10.83□□□□□ -0.68
CEACAM3-203ENST00000415495 COA5Q86WW8 74 aa10.79□□□□□ -0.68
CEACAM3-203ENST00000415495 RBM12B-AS1Q9P1G2 102 aa10.79□□□□□ -0.68
CEACAM3-203ENST00000415495 RPS28P62857 69 aaKnown RBP10.78□□□□□ -0.68
CEACAM3-203ENST00000415495 UBR4Q5T4S7 5183 aa10.78□□□□□ -0.68
CEACAM3-203ENST00000415495 KRTAP19-2Q3LHN2 52 aa10.73□□□□□ -0.69
CEACAM3-203ENST00000415495 RNF213Q63HN8 5207 aa10.73□□□□□ -0.69
CEACAM3-203ENST00000415495 MUC2Q02817 5179 aa10.72□□□□□ -0.69
CEACAM3-203ENST00000415495 H1FX-AS1Q4G0G2 97 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms