RNA–Protein interactions for RNA: ENST00000409938.5

EPHA4-203, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EPHA4, Length 3,363 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-203ENST00000409938 NOTCH2NLQ7Z3S9 236 aa4.64□□□□□ -1.67
EPHA4-203ENST00000409938 ZNF861PO60384 105 aa4.63□□□□□ -1.67
EPHA4-203ENST00000409938 MRPL34Q9BQ48 92 aaKnown RBP4.63□□□□□ -1.67
EPHA4-203ENST00000409938 DNAH11Q96DT5 4516 aa4.62□□□□□ -1.67
EPHA4-203ENST00000409938 RTL8CO15255 209 aa4.61□□□□□ -1.67
EPHA4-203ENST00000409938 LINC01558Q9Y6Z2 57 aa4.61□□□□□ -1.67
EPHA4-203ENST00000409938 IGHV6-1A0A0B4J1U7 121 aa4.61□□□□□ -1.67
EPHA4-203ENST00000409938 DNAH5Q8TE73 4624 aa4.61□□□□□ -1.67
EPHA4-203ENST00000409938 PCOTHQ58A44 107 aa4.61□□□□□ -1.67
EPHA4-203ENST00000409938 HRES1P13985 223 aa4.6□□□□□ -1.67
EPHA4-203ENST00000409938 PRR15LQ9BU68 103 aa4.6□□□□□ -1.67
EPHA4-203ENST00000409938 LCA10Q71F78 164 aa4.6□□□□□ -1.67
EPHA4-203ENST00000409938 ANAPC11Q9NYG5 84 aa4.6□□□□□ -1.67
EPHA4-203ENST00000409938 CHKB-CPT1BH3BT56 60 aa4.59□□□□□ -1.68
EPHA4-203ENST00000409938 PMAIP1Q13794 54 aa4.59□□□□□ -1.68
EPHA4-203ENST00000409938 PKD1P98161 4303 aa4.59□□□□□ -1.68
EPHA4-203ENST00000409938 Q5W150 140 aa4.58□□□□□ -1.68
EPHA4-203ENST00000409938 IGLV7-43P04211 117 aa4.57□□□□□ -1.68
EPHA4-203ENST00000409938 MEGF8Q7Z7M0 2845 aa4.56□□□□□ -1.68
EPHA4-203ENST00000409938 CDK2AP2O75956 126 aa4.56□□□□□ -1.68
EPHA4-203ENST00000409938 ATP11AUNQ6ZP68 121 aa4.55□□□□□ -1.68
EPHA4-203ENST00000409938 NDUFS5O43920 106 aa4.55□□□□□ -1.68
EPHA4-203ENST00000409938 CDC42SE1Q9NRR8 79 aa4.55□□□□□ -1.68
EPHA4-203ENST00000409938 C8orf87E5RJ46 101 aa4.54□□□□□ -1.68
EPHA4-203ENST00000409938 SSBP3-AS1Q7Z2R9 100 aa4.54□□□□□ -1.68
EPHA4-203ENST00000409938 A6NN06 94 aa4.53□□□□□ -1.68
EPHA4-203ENST00000409938 SPAG11AQ6PDA7 123 aa4.53□□□□□ -1.68
EPHA4-203ENST00000409938 FAT2Q9NYQ8 4349 aa4.53□□□□□ -1.68
EPHA4-203ENST00000409938 A6NED7 52 aa4.51□□□□□ -1.69
EPHA4-203ENST00000409938 LRP1BQ9NZR2 4599 aa4.51□□□□□ -1.69
EPHA4-203ENST00000409938 SEC61GP60059 68 aa4.51□□□□□ -1.69
EPHA4-203ENST00000409938 DMAC1Q96GE9 116 aa4.51□□□□□ -1.69
EPHA4-203ENST00000409938 KRTAP16-1A8MUX0 517 aa4.51□□□□□ -1.69
EPHA4-203ENST00000409938 SPINK7P58062 85 aa4.5□□□□□ -1.69
EPHA4-203ENST00000409938 KRTAP13-2Q52LG2 175 aa4.5□□□□□ -1.69
EPHA4-203ENST00000409938 KTN1-AS1Q86SY8 53 aa4.49□□□□□ -1.69
EPHA4-203ENST00000409938 CIRBP-AS1Q8TBR5 109 aa4.49□□□□□ -1.69
EPHA4-203ENST00000409938 C1orf134Q5TEV5 83 aa4.49□□□□□ -1.69
EPHA4-203ENST00000409938 SPINK6Q6UWN8 80 aa4.49□□□□□ -1.69
EPHA4-203ENST00000409938 PRR26Q8N8Z3 221 aa4.49□□□□□ -1.69
EPHA4-203ENST00000409938 Q6ZSA8 131 aa4.48□□□□□ -1.69
EPHA4-203ENST00000409938 TGP01266 2768 aa4.48□□□□□ -1.69
EPHA4-203ENST00000409938 VPS13BQ7Z7G8 4022 aa4.48□□□□□ -1.69
EPHA4-203ENST00000409938 IGKV2-30P06310 120 aa4.48□□□□□ -1.69
EPHA4-203ENST00000409938 ACYP2P14621 99 aa4.48□□□□□ -1.69
EPHA4-203ENST00000409938 FAM229AH3BQW9 127 aa4.47□□□□□ -1.69
EPHA4-203ENST00000409938 LINC00313P59037 77 aa4.47□□□□□ -1.69
EPHA4-203ENST00000409938 KRTAP10-2P60368 255 aa4.46□□□□□ -1.7
EPHA4-203ENST00000409938 KRTAP1-4P0C5Y4 121 aa4.45□□□□□ -1.7
EPHA4-203ENST00000409938 SPTSSBQ8NFR3 76 aa4.45□□□□□ -1.7
EPHA4-203ENST00000409938 HYDINQ4G0P3 5121 aa4.44□□□□□ -1.7
EPHA4-203ENST00000409938 SACSQ9NZJ4 4579 aa4.44□□□□□ -1.7
EPHA4-203ENST00000409938 DNHD1Q96M86 4753 aa4.43□□□□□ -1.7
EPHA4-203ENST00000409938 KRTAP10-1P60331 282 aa4.41□□□□□ -1.7
EPHA4-203ENST00000409938 C7orf65Q6ZTY9 151 aa4.4□□□□□ -1.7
EPHA4-203ENST00000409938 PKHD1L1Q86WI1 4243 aa4.4□□□□□ -1.71
EPHA4-203ENST00000409938 KRTAP21-3Q3LHN1 58 aa4.39□□□□□ -1.71
EPHA4-203ENST00000409938 SPATA8Q6RVD6 105 aa4.39□□□□□ -1.71
EPHA4-203ENST00000409938 RBM12B-AS1Q9P1G2 102 aa4.39□□□□□ -1.71
EPHA4-203ENST00000409938 LY6G6CO95867 125 aa4.38□□□□□ -1.71
EPHA4-203ENST00000409938 IGKV2D-30A0A075B6S6 120 aa4.37□□□□□ -1.71
EPHA4-203ENST00000409938 RETNLBQ9BQ08 111 aa4.37□□□□□ -1.71
EPHA4-203ENST00000409938 A0A1B0GU69 56 aa4.36□□□□□ -1.71
EPHA4-203ENST00000409938 PKHD1P08F94 4074 aa4.35□□□□□ -1.71
EPHA4-203ENST00000409938 RPS29P62273 56 aaKnown RBP4.34□□□□□ -1.71
EPHA4-203ENST00000409938 SPINK1P00995 79 aa4.34□□□□□ -1.72
EPHA4-203ENST00000409938 APOBP04114 4563 aaKnown RBP4.33□□□□□ -1.72
EPHA4-203ENST00000409938 PLA2G1BP04054 148 aaKnown RBP4.33□□□□□ -1.72
EPHA4-203ENST00000409938 TYMSOSQ8TAI1 123 aa4.3□□□□□ -1.72
EPHA4-203ENST00000409938 UQCR11O14957 56 aa4.3□□□□□ -1.72
EPHA4-203ENST00000409938 MIR22HGQ0VDD5 57 aa4.3□□□□□ -1.72
EPHA4-203ENST00000409938 C4orf48Q5BLP8 95 aa4.27□□□□□ -1.73
EPHA4-203ENST00000409938 DYNC1H1Q14204 4646 aaKnown RBP4.26□□□□□ -1.73
EPHA4-203ENST00000409938 A8MUU9 505 aa4.26□□□□□ -1.73
EPHA4-203ENST00000409938 C20orf166-AS1Q96NR2 134 aa4.26□□□□□ -1.73
EPHA4-203ENST00000409938 ADM2Q7Z4H4 148 aa4.25□□□□□ -1.73
EPHA4-203ENST00000409938 KRTAP10-4P60372 401 aaPredicted RBP4.25□□□□□ -1.73
EPHA4-203ENST00000409938 LINC00304Q8N9R0 145 aa4.25□□□□□ -1.73
EPHA4-203ENST00000409938 KRTAP3-1Q9BYR8 98 aa4.24□□□□□ -1.73
EPHA4-203ENST00000409938 PRAC1Q96KF2 57 aa4.24□□□□□ -1.73
EPHA4-203ENST00000409938 Q8N1X5 172 aa4.23□□□□□ -1.73
EPHA4-203ENST00000409938 H0YAA0 97 aa4.2□□□□□ -1.74
EPHA4-203ENST00000409938 FAT1Q14517 4588 aa4.19□□□□□ -1.74
EPHA4-203ENST00000409938 TNXBP22105 4242 aa4.19□□□□□ -1.74
EPHA4-203ENST00000409938 A0A1B0GVY2 172 aa4.18□□□□□ -1.74
EPHA4-203ENST00000409938 HSPG2P98160 4391 aa4.16□□□□□ -1.74
EPHA4-203ENST00000409938 FAT3Q8TDW7 4589 aa4.16□□□□□ -1.74
EPHA4-203ENST00000409938 C9orf92A6NGG3 77 aa4.15□□□□□ -1.75
EPHA4-203ENST00000409938 LINC01554Q52M75 96 aa4.15□□□□□ -1.75
EPHA4-203ENST00000409938 H1FX-AS1Q4G0G2 97 aa4.13□□□□□ -1.75
EPHA4-203ENST00000409938 RYR2Q92736 4967 aa4.13□□□□□ -1.75
EPHA4-203ENST00000409938 CSAG1Q6PB30 78 aa4.12□□□□□ -1.75
EPHA4-203ENST00000409938 A0A1B0GU33 70 aa4.12□□□□□ -1.75
EPHA4-203ENST00000409938 SMR3BP02814 79 aaPredicted RBP4.12□□□□□ -1.75
EPHA4-203ENST00000409938 COX6B2Q6YFQ2 88 aa4.11□□□□□ -1.75
EPHA4-203ENST00000409938 LRP1Q07954 4544 aaKnown RBP4.1□□□□□ -1.75
EPHA4-203ENST00000409938 FLG2Q5D862 2391 aaPredicted RBP4.08□□□□□ -1.76
EPHA4-203ENST00000409938 KRTAP3-3Q9BYR6 98 aa4.07□□□□□ -1.76
EPHA4-203ENST00000409938 KRTAP10-6P60371 365 aaPredicted RBP4.05□□□□□ -1.76
EPHA4-203ENST00000409938 KRTAP10-8P60410 259 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms