RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 HIVEP1P15822 2718 aa2.65□□□□□ -1.98
SCN3A-203ENST00000409101 PRO2289Q9P1D8 64 aa2.65□□□□□ -1.99
SCN3A-203ENST00000409101 FRYQ5TBA9 3013 aa2.65□□□□□ -1.99
SCN3A-203ENST00000409101 A8MU10 97 aa2.64□□□□□ -1.99
SCN3A-203ENST00000409101 PRAC1Q96KF2 57 aa2.64□□□□□ -1.99
SCN3A-203ENST00000409101 NSD1Q96L73 2696 aaPredicted RBP2.64□□□□□ -1.99
SCN3A-203ENST00000409101 USP34Q70CQ2 3546 aa2.63□□□□□ -1.99
SCN3A-203ENST00000409101 DMXL2Q8TDJ6 3036 aa2.62□□□□□ -1.99
SCN3A-203ENST00000409101 VPS13AQ96RL7 3174 aa2.62□□□□□ -1.99
SCN3A-203ENST00000409101 MAP1AP78559 2803 aaPredicted RBP2.61□□□□□ -1.99
SCN3A-203ENST00000409101 A0A0A0MQY5 61 aa2.61□□□□□ -1.99
SCN3A-203ENST00000409101 FBN2P35556 2912 aa2.6□□□□□ -1.99
SCN3A-203ENST00000409101 DNAH14Q0VDD8 3507 aa2.59□□□□□ -2
SCN3A-203ENST00000409101 UTP20O75691 2785 aaKnown RBP2.59□□□□□ -2
SCN3A-203ENST00000409101 KRTAP16-1A8MUX0 517 aa2.57□□□□□ -2
SCN3A-203ENST00000409101 APCP25054 2843 aa2.57□□□□□ -2
SCN3A-203ENST00000409101 XIRP2A4UGR9 3374 aa2.57□□□□□ -2
SCN3A-203ENST00000409101 NBEAQ8NFP9 2946 aa2.56□□□□□ -2
SCN3A-203ENST00000409101 NBEAL2Q6ZNJ1 2754 aa2.55□□□□□ -2
SCN3A-203ENST00000409101 STAB2Q8WWQ8 2551 aa2.54□□□□□ -2
SCN3A-203ENST00000409101 NIPBLQ6KC79 2804 aaeCLIP2.54□□□□□ -2
SCN3A-203ENST00000409101 NF1P21359 2839 aa2.53□□□□□ -2
SCN3A-203ENST00000409101 LRBAP50851 2863 aa2.53□□□□□ -2
SCN3A-203ENST00000409101 LAMA1P25391 3075 aa2.53□□□□□ -2
SCN3A-203ENST00000409101 CRYBG3Q68DQ2 2970 aa2.53□□□□□ -2
SCN3A-203ENST00000409101 ATMQ13315 3056 aa2.53□□□□□ -2
SCN3A-203ENST00000409101 PP632Q6XCG6 107 aa2.52□□□□□ -2.01
SCN3A-203ENST00000409101 DMBT1Q9UGM3 2413 aaPredicted RBP2.52□□□□□ -2.01
SCN3A-203ENST00000409101 C10orf95Q9H7T3 257 aa2.52□□□□□ -2.01
SCN3A-203ENST00000409101 ANK3Q12955 4377 aaKnown RBP2.52□□□□□ -2.01
SCN3A-203ENST00000409101 KRTAP25-1Q3LHN0 102 aa2.52□□□□□ -2.01
SCN3A-203ENST00000409101 ALMS1Q8TCU4 4167 aa2.51□□□□□ -2.01
SCN3A-203ENST00000409101 SPEGQ15772 3267 aa2.51□□□□□ -2.01
SCN3A-203ENST00000409101 COL12A1Q99715 3063 aa2.51□□□□□ -2.01
SCN3A-203ENST00000409101 FREM2Q5SZK8 3169 aa2.5□□□□□ -2.01
SCN3A-203ENST00000409101 MYO15AQ9UKN7 3530 aa2.49□□□□□ -2.01
SCN3A-203ENST00000409101 OTOGQ6ZRI0 2925 aa2.49□□□□□ -2.01
SCN3A-203ENST00000409101 FLG2Q5D862 2391 aaPredicted RBP2.48□□□□□ -2.01
SCN3A-203ENST00000409101 TENM2Q9NT68 2774 aa2.47□□□□□ -2.01
SCN3A-203ENST00000409101 TACC2O95359 2948 aa2.47□□□□□ -2.01
SCN3A-203ENST00000409101 PDZD2O15018 2839 aa2.46□□□□□ -2.02
SCN3A-203ENST00000409101 P0C880 135 aa2.46□□□□□ -2.02
SCN3A-203ENST00000409101 CELSR2Q9HCU4 2923 aa2.45□□□□□ -2.02
SCN3A-203ENST00000409101 ZFHX4Q86UP3 3567 aa2.45□□□□□ -2.02
SCN3A-203ENST00000409101 A6NN06 94 aa2.45□□□□□ -2.02
SCN3A-203ENST00000409101 CELSR3Q9NYQ7 3312 aa2.44□□□□□ -2.02
SCN3A-203ENST00000409101 KRTAP4-5Q9BYR2 181 aa2.44□□□□□ -2.02
SCN3A-203ENST00000409101 LOC400499M0QZD8 3231 aa2.44□□□□□ -2.02
SCN3A-203ENST00000409101 MT1HL1P0DM35 61 aa2.44□□□□□ -2.02
SCN3A-203ENST00000409101 WDFY3Q8IZQ1 3526 aa2.43□□□□□ -2.02
SCN3A-203ENST00000409101 H0YAA0 97 aa2.43□□□□□ -2.02
SCN3A-203ENST00000409101 PKD1L1Q8TDX9 2849 aa2.43□□□□□ -2.02
SCN3A-203ENST00000409101 HRNRQ86YZ3 2850 aaPredicted RBP2.42□□□□□ -2.02
SCN3A-203ENST00000409101 MXRA5Q9NR99 2828 aa2.42□□□□□ -2.02
SCN3A-203ENST00000409101 ADGRG4Q8IZF6 3080 aa2.42□□□□□ -2.02
SCN3A-203ENST00000409101 BOD1L1Q8NFC6 3051 aa2.42□□□□□ -2.02
SCN3A-203ENST00000409101 NBPF19A0A087WUL8 3843 aa2.41□□□□□ -2.02
SCN3A-203ENST00000409101 SMG1Q96Q15 3661 aaKnown RBP2.4□□□□□ -2.02
SCN3A-203ENST00000409101 DMDP11532 3685 aa2.39□□□□□ -2.03
SCN3A-203ENST00000409101 ASPMQ8IZT6 3477 aa2.39□□□□□ -2.03
SCN3A-203ENST00000409101 ZFHX3Q15911 3703 aa2.39□□□□□ -2.03
SCN3A-203ENST00000409101 FBN1P35555 2871 aaKnown RBP2.38□□□□□ -2.03
SCN3A-203ENST00000409101 HUWE1Q7Z6Z7 4374 aaKnown RBP2.38□□□□□ -2.03
SCN3A-203ENST00000409101 TGP01266 2768 aa2.38□□□□□ -2.03
SCN3A-203ENST00000409101 CELSR1Q9NYQ6 3014 aa2.35□□□□□ -2.03
SCN3A-203ENST00000409101 KRTAP12-2P59991 146 aa2.35□□□□□ -2.03
SCN3A-203ENST00000409101 DCHS2Q6V1P9 2916 aa2.35□□□□□ -2.03
SCN3A-203ENST00000409101 H3BS24 57 aa2.35□□□□□ -2.03
SCN3A-203ENST00000409101 KRTAP10-4P60372 401 aaPredicted RBP2.35□□□□□ -2.03
SCN3A-203ENST00000409101 KRTAP13-4Q3LI77 160 aa2.35□□□□□ -2.03
SCN3A-203ENST00000409101 NDUFAF8A1L188 74 aa2.34□□□□□ -2.04
SCN3A-203ENST00000409101 DNHD1Q96M86 4753 aa2.34□□□□□ -2.04
SCN3A-203ENST00000409101 TENM1Q9UKZ4 2725 aa2.33□□□□□ -2.04
SCN3A-203ENST00000409101 KRTAP3-1Q9BYR8 98 aa2.32□□□□□ -2.04
SCN3A-203ENST00000409101 ZANQ9Y493 2812 aa2.32□□□□□ -2.04
SCN3A-203ENST00000409101 LAMA5O15230 3695 aa2.31□□□□□ -2.04
SCN3A-203ENST00000409101 TENM3Q9P273 2699 aa2.3□□□□□ -2.04
SCN3A-203ENST00000409101 KRTAP15-1Q3LI76 137 aa2.3□□□□□ -2.04
SCN3A-203ENST00000409101 KRTAP12-1P59990 96 aa2.29□□□□□ -2.04
SCN3A-203ENST00000409101 SPENQ96T58 3664 aaKnown RBP2.27□□□□□ -2.05
SCN3A-203ENST00000409101 RELNP78509 3460 aa2.26□□□□□ -2.05
SCN3A-203ENST00000409101 BSNQ9UPA5 3926 aa2.26□□□□□ -2.05
SCN3A-203ENST00000409101 DNAH9Q9NYC9 4486 aa2.26□□□□□ -2.05
SCN3A-203ENST00000409101 MEGF8Q7Z7M0 2845 aa2.26□□□□□ -2.05
SCN3A-203ENST00000409101 KRTAP10-12P60413 245 aa2.25□□□□□ -2.05
SCN3A-203ENST00000409101 DNAH1Q9P2D7 4330 aa2.24□□□□□ -2.05
SCN3A-203ENST00000409101 CRCT1Q9UGL9 99 aa2.23□□□□□ -2.05
SCN3A-203ENST00000409101 CSMD1Q96PZ7 3565 aa2.22□□□□□ -2.05
SCN3A-203ENST00000409101 KRTAP10-6P60371 365 aaPredicted RBP2.22□□□□□ -2.05
SCN3A-203ENST00000409101 VWFP04275 2813 aa2.2□□□□□ -2.06
SCN3A-203ENST00000409101 DNAH11Q96DT5 4516 aa2.2□□□□□ -2.06
SCN3A-203ENST00000409101 AKAP9Q99996 3911 aa2.19□□□□□ -2.06
SCN3A-203ENST00000409101 KRTAP8-1Q8IUC2 63 aa2.19□□□□□ -2.06
SCN3A-203ENST00000409101 DNAH2Q9P225 4427 aa2.19□□□□□ -2.06
SCN3A-203ENST00000409101 LORP23490 312 aaPredicted RBP2.19□□□□□ -2.06
SCN3A-203ENST00000409101 DNAH10Q8IVF4 4471 aa2.19□□□□□ -2.06
SCN3A-203ENST00000409101 KRTAP17-1Q9BYP8 105 aa2.18□□□□□ -2.06
SCN3A-203ENST00000409101 KRTAP3-3Q9BYR6 98 aa2.18□□□□□ -2.06
SCN3A-203ENST00000409101 MT1HP80294 61 aa2.17□□□□□ -2.06
SCN3A-203ENST00000409101 VPS13CQ709C8 3753 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms