RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 HIVEP1P15822 2718 aa2.65□□□□□ -1.98
SCN3A-203ENST00000409101 PRO2289Q9P1D8 64 aa2.65□□□□□ -1.99
SCN3A-203ENST00000409101 FRYQ5TBA9 3013 aa2.65□□□□□ -1.99
SCN3A-203ENST00000409101 A8MU10 97 aa2.64□□□□□ -1.99
SCN3A-203ENST00000409101 PRAC1Q96KF2 57 aa2.64□□□□□ -1.99
SCN3A-203ENST00000409101 NSD1Q96L73 2696 aaPredicted RBP2.64□□□□□ -1.99
SCN3A-203ENST00000409101 USP34Q70CQ2 3546 aa2.63□□□□□ -1.99
SCN3A-203ENST00000409101 DMXL2Q8TDJ6 3036 aa2.62□□□□□ -1.99
SCN3A-203ENST00000409101 VPS13AQ96RL7 3174 aa2.62□□□□□ -1.99
SCN3A-203ENST00000409101 MAP1AP78559 2803 aaPredicted RBP2.61□□□□□ -1.99
SCN3A-203ENST00000409101 A0A0A0MQY5 61 aa2.61□□□□□ -1.99
SCN3A-203ENST00000409101 FBN2P35556 2912 aa2.6□□□□□ -1.99
SCN3A-203ENST00000409101 DNAH14Q0VDD8 3507 aa2.59□□□□□ -2
SCN3A-203ENST00000409101 UTP20O75691 2785 aaKnown RBP2.59□□□□□ -2
SCN3A-203ENST00000409101 KRTAP16-1A8MUX0 517 aa2.57□□□□□ -2
SCN3A-203ENST00000409101 APCP25054 2843 aa2.57□□□□□ -2
SCN3A-203ENST00000409101 XIRP2A4UGR9 3374 aa2.57□□□□□ -2
SCN3A-203ENST00000409101 NBEAQ8NFP9 2946 aa2.56□□□□□ -2
SCN3A-203ENST00000409101 NBEAL2Q6ZNJ1 2754 aa2.55□□□□□ -2
SCN3A-203ENST00000409101 STAB2Q8WWQ8 2551 aa2.54□□□□□ -2
SCN3A-203ENST00000409101 NIPBLQ6KC79 2804 aaeCLIP2.54□□□□□ -2
SCN3A-203ENST00000409101 NF1P21359 2839 aa2.53□□□□□ -2
SCN3A-203ENST00000409101 LRBAP50851 2863 aa2.53□□□□□ -2
SCN3A-203ENST00000409101 LAMA1P25391 3075 aa2.53□□□□□ -2
SCN3A-203ENST00000409101 CRYBG3Q68DQ2 2970 aa2.53□□□□□ -2
SCN3A-203ENST00000409101 ATMQ13315 3056 aa2.53□□□□□ -2
SCN3A-203ENST00000409101 PP632Q6XCG6 107 aa2.52□□□□□ -2.01
SCN3A-203ENST00000409101 DMBT1Q9UGM3 2413 aaPredicted RBP2.52□□□□□ -2.01
SCN3A-203ENST00000409101 C10orf95Q9H7T3 257 aa2.52□□□□□ -2.01
SCN3A-203ENST00000409101 ANK3Q12955 4377 aaKnown RBP2.52□□□□□ -2.01
SCN3A-203ENST00000409101 KRTAP25-1Q3LHN0 102 aa2.52□□□□□ -2.01
SCN3A-203ENST00000409101 ALMS1Q8TCU4 4167 aa2.51□□□□□ -2.01
SCN3A-203ENST00000409101 SPEGQ15772 3267 aa2.51□□□□□ -2.01
SCN3A-203ENST00000409101 COL12A1Q99715 3063 aa2.51□□□□□ -2.01
SCN3A-203ENST00000409101 FREM2Q5SZK8 3169 aa2.5□□□□□ -2.01
SCN3A-203ENST00000409101 MYO15AQ9UKN7 3530 aa2.49□□□□□ -2.01
SCN3A-203ENST00000409101 OTOGQ6ZRI0 2925 aa2.49□□□□□ -2.01
SCN3A-203ENST00000409101 FLG2Q5D862 2391 aaPredicted RBP2.48□□□□□ -2.01
SCN3A-203ENST00000409101 TENM2Q9NT68 2774 aa2.47□□□□□ -2.01
SCN3A-203ENST00000409101 TACC2O95359 2948 aa2.47□□□□□ -2.01
SCN3A-203ENST00000409101 PDZD2O15018 2839 aa2.46□□□□□ -2.02
SCN3A-203ENST00000409101 P0C880 135 aa2.46□□□□□ -2.02
SCN3A-203ENST00000409101 CELSR2Q9HCU4 2923 aa2.45□□□□□ -2.02
SCN3A-203ENST00000409101 ZFHX4Q86UP3 3567 aa2.45□□□□□ -2.02
SCN3A-203ENST00000409101 A6NN06 94 aa2.45□□□□□ -2.02
SCN3A-203ENST00000409101 CELSR3Q9NYQ7 3312 aa2.44□□□□□ -2.02
SCN3A-203ENST00000409101 KRTAP4-5Q9BYR2 181 aa2.44□□□□□ -2.02
SCN3A-203ENST00000409101 LOC400499M0QZD8 3231 aa2.44□□□□□ -2.02
SCN3A-203ENST00000409101 MT1HL1P0DM35 61 aa2.44□□□□□ -2.02
SCN3A-203ENST00000409101 WDFY3Q8IZQ1 3526 aa2.43□□□□□ -2.02
SCN3A-203ENST00000409101 H0YAA0 97 aa2.43□□□□□ -2.02
SCN3A-203ENST00000409101 PKD1L1Q8TDX9 2849 aa2.43□□□□□ -2.02
SCN3A-203ENST00000409101 HRNRQ86YZ3 2850 aaPredicted RBP2.42□□□□□ -2.02
SCN3A-203ENST00000409101 MXRA5Q9NR99 2828 aa2.42□□□□□ -2.02
SCN3A-203ENST00000409101 ADGRG4Q8IZF6 3080 aa2.42□□□□□ -2.02
SCN3A-203ENST00000409101 BOD1L1Q8NFC6 3051 aa2.42□□□□□ -2.02
SCN3A-203ENST00000409101 NBPF19A0A087WUL8 3843 aa2.41□□□□□ -2.02
SCN3A-203ENST00000409101 SMG1Q96Q15 3661 aaKnown RBP2.4□□□□□ -2.02
SCN3A-203ENST00000409101 DMDP11532 3685 aa2.39□□□□□ -2.03
SCN3A-203ENST00000409101 ASPMQ8IZT6 3477 aa2.39□□□□□ -2.03
SCN3A-203ENST00000409101 ZFHX3Q15911 3703 aa2.39□□□□□ -2.03
SCN3A-203ENST00000409101 FBN1P35555 2871 aaKnown RBP2.38□□□□□ -2.03
SCN3A-203ENST00000409101 HUWE1Q7Z6Z7 4374 aaKnown RBP2.38□□□□□ -2.03
SCN3A-203ENST00000409101 TGP01266 2768 aa2.38□□□□□ -2.03
SCN3A-203ENST00000409101 CELSR1Q9NYQ6 3014 aa2.35□□□□□ -2.03
SCN3A-203ENST00000409101 KRTAP12-2P59991 146 aa2.35□□□□□ -2.03
SCN3A-203ENST00000409101 DCHS2Q6V1P9 2916 aa2.35□□□□□ -2.03
SCN3A-203ENST00000409101 H3BS24 57 aa2.35□□□□□ -2.03
SCN3A-203ENST00000409101 KRTAP10-4P60372 401 aaPredicted RBP2.35□□□□□ -2.03
SCN3A-203ENST00000409101 KRTAP13-4Q3LI77 160 aa2.35□□□□□ -2.03
SCN3A-203ENST00000409101 NDUFAF8A1L188 74 aa2.34□□□□□ -2.04
SCN3A-203ENST00000409101 DNHD1Q96M86 4753 aa2.34□□□□□ -2.04
SCN3A-203ENST00000409101 TENM1Q9UKZ4 2725 aa2.33□□□□□ -2.04
SCN3A-203ENST00000409101 KRTAP3-1Q9BYR8 98 aa2.32□□□□□ -2.04
SCN3A-203ENST00000409101 ZANQ9Y493 2812 aa2.32□□□□□ -2.04
SCN3A-203ENST00000409101 LAMA5O15230 3695 aa2.31□□□□□ -2.04
SCN3A-203ENST00000409101 TENM3Q9P273 2699 aa2.3□□□□□ -2.04
SCN3A-203ENST00000409101 KRTAP15-1Q3LI76 137 aa2.3□□□□□ -2.04
SCN3A-203ENST00000409101 KRTAP12-1P59990 96 aa2.29□□□□□ -2.04
SCN3A-203ENST00000409101 SPENQ96T58 3664 aaKnown RBP2.27□□□□□ -2.05
SCN3A-203ENST00000409101 RELNP78509 3460 aa2.26□□□□□ -2.05
SCN3A-203ENST00000409101 BSNQ9UPA5 3926 aa2.26□□□□□ -2.05
SCN3A-203ENST00000409101 DNAH9Q9NYC9 4486 aa2.26□□□□□ -2.05
SCN3A-203ENST00000409101 MEGF8Q7Z7M0 2845 aa2.26□□□□□ -2.05
SCN3A-203ENST00000409101 KRTAP10-12P60413 245 aa2.25□□□□□ -2.05
SCN3A-203ENST00000409101 DNAH1Q9P2D7 4330 aa2.24□□□□□ -2.05
SCN3A-203ENST00000409101 CRCT1Q9UGL9 99 aa2.23□□□□□ -2.05
SCN3A-203ENST00000409101 CSMD1Q96PZ7 3565 aa2.22□□□□□ -2.05
SCN3A-203ENST00000409101 KRTAP10-6P60371 365 aaPredicted RBP2.22□□□□□ -2.05
SCN3A-203ENST00000409101 VWFP04275 2813 aa2.2□□□□□ -2.06
SCN3A-203ENST00000409101 DNAH11Q96DT5 4516 aa2.2□□□□□ -2.06
SCN3A-203ENST00000409101 AKAP9Q99996 3911 aa2.19□□□□□ -2.06
SCN3A-203ENST00000409101 KRTAP8-1Q8IUC2 63 aa2.19□□□□□ -2.06
SCN3A-203ENST00000409101 DNAH2Q9P225 4427 aa2.19□□□□□ -2.06
SCN3A-203ENST00000409101 LORP23490 312 aaPredicted RBP2.19□□□□□ -2.06
SCN3A-203ENST00000409101 DNAH10Q8IVF4 4471 aa2.19□□□□□ -2.06
SCN3A-203ENST00000409101 KRTAP17-1Q9BYP8 105 aa2.18□□□□□ -2.06
SCN3A-203ENST00000409101 KRTAP3-3Q9BYR6 98 aa2.18□□□□□ -2.06
SCN3A-203ENST00000409101 MT1HP80294 61 aa2.17□□□□□ -2.06
SCN3A-203ENST00000409101 VPS13CQ709C8 3753 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms