RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 ITPR2Q14571 2701 aa8.92□□□□□ -0.98
CBX6-202ENST00000407418 CHD6Q8TD26 2715 aa8.91□□□□□ -0.98
CBX6-202ENST00000407418 NBEAQ8NFP9 2946 aa8.9□□□□□ -0.98
CBX6-202ENST00000407418 A0A1B0GVY2 172 aa8.9□□□□□ -0.98
CBX6-202ENST00000407418 WDFY3Q8IZQ1 3526 aa8.88□□□□□ -0.99
CBX6-202ENST00000407418 KRTAP1-4P0C5Y4 121 aa8.88□□□□□ -0.99
CBX6-202ENST00000407418 LRBAP50851 2863 aa8.87□□□□□ -0.99
CBX6-202ENST00000407418 DMDP11532 3685 aa8.87□□□□□ -0.99
CBX6-202ENST00000407418 C10orf95Q9H7T3 257 aa8.86□□□□□ -0.99
CBX6-202ENST00000407418 FLG2Q5D862 2391 aaPredicted RBP8.86□□□□□ -0.99
CBX6-202ENST00000407418 LOC400499M0QZD8 3231 aa8.85□□□□□ -0.99
CBX6-202ENST00000407418 ATMQ13315 3056 aa8.84□□□□□ -0.99
CBX6-202ENST00000407418 KRTAP10-8P60410 259 aa8.84□□□□□ -0.99
CBX6-202ENST00000407418 ADGRG4Q8IZF6 3080 aa8.83□□□□□ -1
CBX6-202ENST00000407418 GCN1Q92616 2671 aaKnown RBP8.83□□□□□ -1
CBX6-202ENST00000407418 KRTAP10-10P60014 251 aa8.82□□□□□ -1
CBX6-202ENST00000407418 DMBT1Q9UGM3 2413 aaPredicted RBP8.8□□□□□ -1
CBX6-202ENST00000407418 NSD1Q96L73 2696 aaPredicted RBP8.79□□□□□ -1
CBX6-202ENST00000407418 PRO2289Q9P1D8 64 aa8.78□□□□□ -1
CBX6-202ENST00000407418 MAP1AP78559 2803 aaPredicted RBP8.77□□□□□ -1
CBX6-202ENST00000407418 NOTCH1P46531 2555 aa8.77□□□□□ -1
CBX6-202ENST00000407418 CFAP47Q6ZTR5 3102 aa8.76□□□□□ -1.01
CBX6-202ENST00000407418 ASPMQ8IZT6 3477 aa8.75□□□□□ -1.01
CBX6-202ENST00000407418 KALRNO60229 2985 aa8.74□□□□□ -1.01
CBX6-202ENST00000407418 COL12A1Q99715 3063 aa8.73□□□□□ -1.01
CBX6-202ENST00000407418 LAMA5O15230 3695 aa8.67□□□□□ -1.02
CBX6-202ENST00000407418 KRTAP13-3Q3SY46 172 aa8.67□□□□□ -1.02
CBX6-202ENST00000407418 ZFHX4Q86UP3 3567 aa8.65□□□□□ -1.02
CBX6-202ENST00000407418 MUC3AQ02505 3323 aa8.62□□□□□ -1.03
CBX6-202ENST00000407418 PP632Q6XCG6 107 aa8.62□□□□□ -1.03
CBX6-202ENST00000407418 STAB2Q8WWQ8 2551 aa8.59□□□□□ -1.03
CBX6-202ENST00000407418 RELNP78509 3460 aa8.59□□□□□ -1.03
CBX6-202ENST00000407418 UBR5O95071 2799 aaPredicted RBP8.58□□□□□ -1.04
CBX6-202ENST00000407418 UTP20O75691 2785 aaKnown RBP8.56□□□□□ -1.04
CBX6-202ENST00000407418 NBEAL2Q6ZNJ1 2754 aa8.55□□□□□ -1.04
CBX6-202ENST00000407418 HIVEP1P15822 2718 aa8.55□□□□□ -1.04
CBX6-202ENST00000407418 ZZEF1O43149 2961 aa8.53□□□□□ -1.04
CBX6-202ENST00000407418 FLNCQ14315 2725 aa8.53□□□□□ -1.04
CBX6-202ENST00000407418 TACC2O95359 2948 aa8.51□□□□□ -1.05
CBX6-202ENST00000407418 H0YAA0 97 aa8.51□□□□□ -1.05
CBX6-202ENST00000407418 DCHS1Q96JQ0 3298 aa8.48□□□□□ -1.05
CBX6-202ENST00000407418 ITPR1Q14643 2758 aa8.47□□□□□ -1.05
CBX6-202ENST00000407418 HRNRQ86YZ3 2850 aaPredicted RBP8.46□□□□□ -1.05
CBX6-202ENST00000407418 P0C880 135 aa8.46□□□□□ -1.06
CBX6-202ENST00000407418 SMG1Q96Q15 3661 aaKnown RBP8.38□□□□□ -1.07
CBX6-202ENST00000407418 TENM4Q6N022 2769 aa8.38□□□□□ -1.07
CBX6-202ENST00000407418 CRYBG3Q68DQ2 2970 aa8.35□□□□□ -1.07
CBX6-202ENST00000407418 APCP25054 2843 aa8.35□□□□□ -1.07
CBX6-202ENST00000407418 CSMD1Q96PZ7 3565 aa8.3□□□□□ -1.08
CBX6-202ENST00000407418 CELSR2Q9HCU4 2923 aa8.25□□□□□ -1.09
CBX6-202ENST00000407418 ZANQ9Y493 2812 aa8.24□□□□□ -1.09
CBX6-202ENST00000407418 NBPF19A0A087WUL8 3843 aa8.22□□□□□ -1.09
CBX6-202ENST00000407418 BSNQ9UPA5 3926 aa8.21□□□□□ -1.09
CBX6-202ENST00000407418 DCHS2Q6V1P9 2916 aa8.2□□□□□ -1.1
CBX6-202ENST00000407418 SPENQ96T58 3664 aaKnown RBP8.18□□□□□ -1.1
CBX6-202ENST00000407418 ASH1LQ9NR48 2969 aaKnown RBP8.17□□□□□ -1.1
CBX6-202ENST00000407418 SVEP1Q4LDE5 3571 aa8.14□□□□□ -1.11
CBX6-202ENST00000407418 FBN2P35556 2912 aa8.13□□□□□ -1.11
CBX6-202ENST00000407418 NIPBLQ6KC79 2804 aaeCLIP8.05□□□□□ -1.12
CBX6-202ENST00000407418 TENM2Q9NT68 2774 aa8.02□□□□□ -1.12
CBX6-202ENST00000407418 KRTAP12-2P59991 146 aa8.01□□□□□ -1.13
CBX6-202ENST00000407418 CELSR1Q9NYQ6 3014 aa7.94□□□□□ -1.14
CBX6-202ENST00000407418 ANK3Q12955 4377 aaKnown RBP7.94□□□□□ -1.14
CBX6-202ENST00000407418 NF1P21359 2839 aa7.93□□□□□ -1.14
CBX6-202ENST00000407418 CSMD2Q7Z408 3487 aa7.92□□□□□ -1.14
CBX6-202ENST00000407418 MXRA5Q9NR99 2828 aa7.9□□□□□ -1.15
CBX6-202ENST00000407418 KRTAP13-4Q3LI77 160 aa7.89□□□□□ -1.15
CBX6-202ENST00000407418 PDZD2O15018 2839 aa7.88□□□□□ -1.15
CBX6-202ENST00000407418 TENM1Q9UKZ4 2725 aa7.85□□□□□ -1.15
CBX6-202ENST00000407418 VPS13CQ709C8 3753 aa7.77□□□□□ -1.17
CBX6-202ENST00000407418 KRTAP12-1P59990 96 aa7.76□□□□□ -1.17
CBX6-202ENST00000407418 MT1HL1P0DM35 61 aa7.74□□□□□ -1.17
CBX6-202ENST00000407418 ZFHX3Q15911 3703 aa7.73□□□□□ -1.17
CBX6-202ENST00000407418 KRTAP15-1Q3LI76 137 aa7.72□□□□□ -1.17
CBX6-202ENST00000407418 TENM3Q9P273 2699 aa7.71□□□□□ -1.18
CBX6-202ENST00000407418 CUBNO60494 3623 aa7.71□□□□□ -1.18
CBX6-202ENST00000407418 OTOGQ6ZRI0 2925 aa7.67□□□□□ -1.18
CBX6-202ENST00000407418 KRTAP3-1Q9BYR8 98 aa7.64□□□□□ -1.19
CBX6-202ENST00000407418 KRTAP4-5Q9BYR2 181 aa7.58□□□□□ -1.2
CBX6-202ENST00000407418 ALMS1Q8TCU4 4167 aa7.57□□□□□ -1.2
CBX6-202ENST00000407418 TRRAPQ9Y4A5 3859 aa7.56□□□□□ -1.2
CBX6-202ENST00000407418 FBN1P35555 2871 aaKnown RBP7.53□□□□□ -1.2
CBX6-202ENST00000407418 ZNF469Q96JG9 3925 aaPredicted RBP7.49□□□□□ -1.21
CBX6-202ENST00000407418 TGP01266 2768 aa7.49□□□□□ -1.21
CBX6-202ENST00000407418 AKAP9Q99996 3911 aa7.48□□□□□ -1.21
CBX6-202ENST00000407418 KRTAP10-12P60413 245 aa7.45□□□□□ -1.22
CBX6-202ENST00000407418 INE1O15225 51 aa7.43□□□□□ -1.22
CBX6-202ENST00000407418 VWFP04275 2813 aa7.42□□□□□ -1.22
CBX6-202ENST00000407418 KRTAP10-4P60372 401 aaPredicted RBP7.4□□□□□ -1.22
CBX6-202ENST00000407418 KRTAP10-6P60371 365 aaPredicted RBP7.4□□□□□ -1.23
CBX6-202ENST00000407418 HUWE1Q7Z6Z7 4374 aaKnown RBP7.38□□□□□ -1.23
CBX6-202ENST00000407418 CRCT1Q9UGL9 99 aa7.37□□□□□ -1.23
CBX6-202ENST00000407418 PKD1L1Q8TDX9 2849 aa7.33□□□□□ -1.24
CBX6-202ENST00000407418 KRTAP3-3Q9BYR6 98 aa7.15□□□□□ -1.26
CBX6-202ENST00000407418 KRTAP8-1Q8IUC2 63 aa7.13□□□□□ -1.27
CBX6-202ENST00000407418 KRTAP12-3P60328 96 aa7.12□□□□□ -1.27
CBX6-202ENST00000407418 KRTAP3-2Q9BYR7 98 aa7.11□□□□□ -1.27
CBX6-202ENST00000407418 DNAH9Q9NYC9 4486 aa7.05□□□□□ -1.28
CBX6-202ENST00000407418 FBN3Q75N90 2809 aa7.01□□□□□ -1.29
CBX6-202ENST00000407418 KRTAP23-1A1A580 65 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms