RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 Q8N9L7 120 aa12.13□□□□□ -0.47
TPM1-208ENST00000404484 A8MWP4 228 aa12.11□□□□□ -0.47
TPM1-208ENST00000404484 NDUFB1O75438 58 aa12.1□□□□□ -0.47
TPM1-208ENST00000404484 K7EQZ3 153 aa12.09□□□□□ -0.47
TPM1-208ENST00000404484 KRTAP10-8P60410 259 aa12.08□□□□□ -0.48
TPM1-208ENST00000404484 PRR15Q8IV56 129 aa12.06□□□□□ -0.48
TPM1-208ENST00000404484 ATOX1O00244 68 aa12.03□□□□□ -0.48
TPM1-208ENST00000404484 C1orf195Q5TG92 126 aa12.01□□□□□ -0.49
TPM1-208ENST00000404484 HCG22E2RYF7 251 aa11.99□□□□□ -0.49
TPM1-208ENST00000404484 HMCN2Q8NDA2 5059 aa11.98□□□□□ -0.49
TPM1-208ENST00000404484 A0A1B0GVX0 72 aa11.98□□□□□ -0.49
TPM1-208ENST00000404484 ANAPC13Q9BS18 74 aa11.98□□□□□ -0.49
TPM1-208ENST00000404484 PCP4P48539 62 aa11.96□□□□□ -0.5
TPM1-208ENST00000404484 SMIM20Q8N5G0 67 aa11.93□□□□□ -0.5
TPM1-208ENST00000404484 IGHV6-1A0A0B4J1U7 121 aa11.92□□□□□ -0.5
TPM1-208ENST00000404484 CASC2Q6XLA1 102 aa11.9□□□□□ -0.5
TPM1-208ENST00000404484 C8orf17Q9NRJ1 99 aa11.9□□□□□ -0.5
TPM1-208ENST00000404484 MMP24-AS1A0A0U1RRL7 71 aa11.89□□□□□ -0.51
TPM1-208ENST00000404484 WFDC13Q8IUB5 93 aa11.89□□□□□ -0.51
TPM1-208ENST00000404484 C8orf87E5RJ46 101 aa11.88□□□□□ -0.51
TPM1-208ENST00000404484 hDV103S1A0JD37 113 aa11.86□□□□□ -0.51
TPM1-208ENST00000404484 SERP2Q8N6R1 65 aa11.85□□□□□ -0.51
TPM1-208ENST00000404484 TRAV7A0A075B6U4 112 aa11.84□□□□□ -0.51
TPM1-208ENST00000404484 TMEM254Q8TBM7 123 aa11.8□□□□□ -0.52
TPM1-208ENST00000404484 LINC00313P59037 77 aa11.79□□□□□ -0.52
TPM1-208ENST00000404484 OCR1Q9BZK8 76 aa11.79□□□□□ -0.52
TPM1-208ENST00000404484 COX7CP15954 63 aa11.79□□□□□ -0.52
TPM1-208ENST00000404484 UQCRQO14949 82 aa11.76□□□□□ -0.53
TPM1-208ENST00000404484 NOTCH2NLQ7Z3S9 236 aa11.76□□□□□ -0.53
TPM1-208ENST00000404484 MRPL34Q9BQ48 92 aaKnown RBP11.76□□□□□ -0.53
TPM1-208ENST00000404484 LRP2P98164 4655 aa11.71□□□□□ -0.53
TPM1-208ENST00000404484 FP248Q71RG6 208 aaPredicted RBP11.71□□□□□ -0.54
TPM1-208ENST00000404484 RETNLBQ9BQ08 111 aa11.71□□□□□ -0.54
TPM1-208ENST00000404484 UBR4Q5T4S7 5183 aa11.7□□□□□ -0.54
TPM1-208ENST00000404484 TP53AIP1Q9HCN2 124 aa11.7□□□□□ -0.54
TPM1-208ENST00000404484 NDUFS5O43920 106 aa11.67□□□□□ -0.54
TPM1-208ENST00000404484 CCDC179H3BU77 68 aa11.66□□□□□ -0.54
TPM1-208ENST00000404484 C5orf47Q569G3 176 aa11.63□□□□□ -0.55
TPM1-208ENST00000404484 KRTAP16-1A8MUX0 517 aa11.62□□□□□ -0.55
TPM1-208ENST00000404484 Q8N9P0 234 aaPredicted RBP11.62□□□□□ -0.55
TPM1-208ENST00000404484 C20orf197Q8N268 126 aa11.6□□□□□ -0.55
TPM1-208ENST00000404484 MP68P56378 58 aa11.59□□□□□ -0.55
TPM1-208ENST00000404484 LPAP08519 4548 aa11.59□□□□□ -0.55
TPM1-208ENST00000404484 TRAV22A0A0B4J277 110 aa11.56□□□□□ -0.56
TPM1-208ENST00000404484 IGLV7-46A0A075B6I9 117 aa11.54□□□□□ -0.56
TPM1-208ENST00000404484 C9orf92A6NGG3 77 aa11.54□□□□□ -0.56
TPM1-208ENST00000404484 H0Y9P7 68 aa11.54□□□□□ -0.56
TPM1-208ENST00000404484 KLKP1Q107X0 134 aa11.54□□□□□ -0.56
TPM1-208ENST00000404484 PRR4Q16378 134 aa11.54□□□□□ -0.56
TPM1-208ENST00000404484 H3BPC8 53 aa11.54□□□□□ -0.56
TPM1-208ENST00000404484 A0A0U1RQV1 116 aa11.51□□□□□ -0.57
TPM1-208ENST00000404484 SNURFQ9Y675 71 aa11.49□□□□□ -0.57
TPM1-208ENST00000404484 C20orf166-AS1Q96NR2 134 aa11.47□□□□□ -0.57
TPM1-208ENST00000404484 NDUFC1O43677 76 aa11.46□□□□□ -0.57
TPM1-208ENST00000404484 A8MUU9 505 aa11.45□□□□□ -0.58
TPM1-208ENST00000404484 LINC00208Q96KT6 92 aa11.45□□□□□ -0.58
TPM1-208ENST00000404484 KRTAP13-3Q3SY46 172 aa11.43□□□□□ -0.58
TPM1-208ENST00000404484 C1orf64Q8NEQ6 169 aa11.43□□□□□ -0.58
TPM1-208ENST00000404484 ZCCHC13Q8WW36 166 aaKnown RBP11.42□□□□□ -0.58
TPM1-208ENST00000404484 Q5W150 140 aa11.41□□□□□ -0.58
TPM1-208ENST00000404484 RNF213Q63HN8 5207 aa11.4□□□□□ -0.58
TPM1-208ENST00000404484 Q75L30 129 aa11.4□□□□□ -0.58
TPM1-208ENST00000404484 CYSTM1Q9H1C7 97 aa11.39□□□□□ -0.59
TPM1-208ENST00000404484 LOC101927531A0A1B0GV80 90 aa11.37□□□□□ -0.59
TPM1-208ENST00000404484 TPRXLQ17RH7 258 aa11.37□□□□□ -0.59
TPM1-208ENST00000404484 H7BZZ5 65 aa11.35□□□□□ -0.59
TPM1-208ENST00000404484 TMEM258P61165 79 aa11.33□□□□□ -0.6
TPM1-208ENST00000404484 XP32Q5T750 250 aa11.31□□□□□ -0.6
TPM1-208ENST00000404484 RPL37P61927 97 aaKnown RBP11.28□□□□□ -0.6
TPM1-208ENST00000404484 IGKV2-30P06310 120 aa11.27□□□□□ -0.61
TPM1-208ENST00000404484 CYP4F30PQ9H0H9 118 aa11.25□□□□□ -0.61
TPM1-208ENST00000404484 ATP11AUNQ6ZP68 121 aa11.24□□□□□ -0.61
TPM1-208ENST00000404484 ATP5EP56381 51 aaPredicted RBP11.21□□□□□ -0.61
TPM1-208ENST00000404484 IGKV2D-30A0A075B6S6 120 aa11.2□□□□□ -0.62
TPM1-208ENST00000404484 FAM236DA0A1B0GTK5 79 aa11.2□□□□□ -0.62
TPM1-208ENST00000404484 FAM236CP0DP71 79 aa11.2□□□□□ -0.62
TPM1-208ENST00000404484 C7orf65Q6ZTY9 151 aa11.2□□□□□ -0.62
TPM1-208ENST00000404484 PCOTHQ58A44 107 aa11.19□□□□□ -0.62
TPM1-208ENST00000404484 MUC2Q02817 5179 aa11.18□□□□□ -0.62
TPM1-208ENST00000404484 SPANXA2-OT1Q8N9U9 137 aa11.17□□□□□ -0.62
TPM1-208ENST00000404484 MUC17Q685J3 4493 aa11.07□□□□□ -0.64
TPM1-208ENST00000404484 SPINK7P58062 85 aa11.07□□□□□ -0.64
TPM1-208ENST00000404484 HRES1P13985 223 aa11.06□□□□□ -0.64
TPM1-208ENST00000404484 SEC61BP60468 96 aaKnown RBP11□□□□□ -0.65
TPM1-208ENST00000404484 SERP1Q9Y6X1 66 aa10.96□□□□□ -0.65
TPM1-208ENST00000404484 RPS28P62857 69 aaKnown RBP10.91□□□□□ -0.66
TPM1-208ENST00000404484 DMAC1Q96GE9 116 aa10.91□□□□□ -0.66
TPM1-208ENST00000404484 C4orf26Q17RF5 130 aa10.88□□□□□ -0.67
TPM1-208ENST00000404484 A8MUN3 132 aa10.87□□□□□ -0.67
TPM1-208ENST00000404484 ACYP2P14621 99 aa10.87□□□□□ -0.67
TPM1-208ENST00000404484 KRTAP4-1Q9BYQ7 146 aa10.85□□□□□ -0.67
TPM1-208ENST00000404484 FAT4Q6V0I7 4981 aa10.84□□□□□ -0.67
TPM1-208ENST00000404484 COX6B2Q6YFQ2 88 aa10.81□□□□□ -0.68
TPM1-208ENST00000404484 COA5Q86WW8 74 aa10.8□□□□□ -0.68
TPM1-208ENST00000404484 RBM12B-AS1Q9P1G2 102 aa10.71□□□□□ -0.69
TPM1-208ENST00000404484 CHKB-CPT1BH3BT56 60 aa10.7□□□□□ -0.7
TPM1-208ENST00000404484 KRTAP3-1Q9BYR8 98 aa10.69□□□□□ -0.7
TPM1-208ENST00000404484 MPLKIPQ8TAP9 179 aa10.69□□□□□ -0.7
TPM1-208ENST00000404484 SMIM26A0A096LP01 95 aa10.67□□□□□ -0.7
TPM1-208ENST00000404484 LCE2AQ5TA79 106 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 318.6 ms