RNA–Protein interactions for RNA: ENST00000403683.1

HIST2H3A-201, Transcript of histone cluster 2 H3 family member a, humanhuman

APPRIS P1 BASIC

Gene HIST2H3A, Length 1,656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3A-201ENST00000403683 DMBT1Q9UGM3 2413 aaPredicted RBP14.26□□□□□ -0.13
HIST2H3A-201ENST00000403683 PRR15Q8IV56 129 aa14.24□□□□□ -0.13
HIST2H3A-201ENST00000403683 A0A087WVE0 104 aa14.23□□□□□ -0.13
HIST2H3A-201ENST00000403683 IGHV6-1A0A0B4J1U7 121 aa14.23□□□□□ -0.13
HIST2H3A-201ENST00000403683 A0A1B0GVX0 72 aa14.21□□□□□ -0.13
HIST2H3A-201ENST00000403683 PCLOQ9Y6V0 5065 aa14.12□□□□□ -0.15
HIST2H3A-201ENST00000403683 HCG22E2RYF7 251 aa14.1□□□□□ -0.15
HIST2H3A-201ENST00000403683 C8orf17Q9NRJ1 99 aa14.1□□□□□ -0.15
HIST2H3A-201ENST00000403683 WFDC13Q8IUB5 93 aa14.1□□□□□ -0.15
HIST2H3A-201ENST00000403683 FAM236AA0A1B0GUQ0 79 aa14.08□□□□□ -0.16
HIST2H3A-201ENST00000403683 FAM236BA0A1B0GV22 79 aa14.08□□□□□ -0.16
HIST2H3A-201ENST00000403683 LINC00313P59037 77 aa14.08□□□□□ -0.16
HIST2H3A-201ENST00000403683 C8orf87E5RJ46 101 aa14.07□□□□□ -0.16
HIST2H3A-201ENST00000403683 NOTCH2NLQ7Z3S9 236 aa14.07□□□□□ -0.16
HIST2H3A-201ENST00000403683 CASC2Q6XLA1 102 aa14.06□□□□□ -0.16
HIST2H3A-201ENST00000403683 FP248Q71RG6 208 aaPredicted RBP14.06□□□□□ -0.16
HIST2H3A-201ENST00000403683 MMP24-AS1A0A0U1RRL7 71 aa14.05□□□□□ -0.16
HIST2H3A-201ENST00000403683 SCGB1A1P11684 91 aa14.05□□□□□ -0.16
HIST2H3A-201ENST00000403683 PRR4Q16378 134 aa14.05□□□□□ -0.16
HIST2H3A-201ENST00000403683 hDV103S1A0JD37 113 aa14.04□□□□□ -0.16
HIST2H3A-201ENST00000403683 IGLV7-46A0A075B6I9 117 aa14.02□□□□□ -0.16
HIST2H3A-201ENST00000403683 C9orf92A6NGG3 77 aa14□□□□□ -0.17
HIST2H3A-201ENST00000403683 TMEM254Q8TBM7 123 aa13.94□□□□□ -0.18
HIST2H3A-201ENST00000403683 MRPL34Q9BQ48 92 aaKnown RBP13.93□□□□□ -0.18
HIST2H3A-201ENST00000403683 NDUFS5O43920 106 aa13.91□□□□□ -0.18
HIST2H3A-201ENST00000403683 ATOX1O00244 68 aa13.88□□□□□ -0.19
HIST2H3A-201ENST00000403683 KRTAP16-1A8MUX0 517 aa13.84□□□□□ -0.19
HIST2H3A-201ENST00000403683 KRTAP13-3Q3SY46 172 aa13.81□□□□□ -0.2
HIST2H3A-201ENST00000403683 SMIM20Q8N5G0 67 aa13.79□□□□□ -0.2
HIST2H3A-201ENST00000403683 ANAPC13Q9BS18 74 aa13.79□□□□□ -0.2
HIST2H3A-201ENST00000403683 Q8N9P0 234 aaPredicted RBP13.76□□□□□ -0.21
HIST2H3A-201ENST00000403683 OCR1Q9BZK8 76 aa13.75□□□□□ -0.21
HIST2H3A-201ENST00000403683 TPRXLQ17RH7 258 aa13.75□□□□□ -0.21
HIST2H3A-201ENST00000403683 TP53AIP1Q9HCN2 124 aa13.74□□□□□ -0.21
HIST2H3A-201ENST00000403683 TRAV7A0A075B6U4 112 aa13.73□□□□□ -0.21
HIST2H3A-201ENST00000403683 UQCRQO14949 82 aa13.69□□□□□ -0.22
HIST2H3A-201ENST00000403683 SERP2Q8N6R1 65 aa13.69□□□□□ -0.22
HIST2H3A-201ENST00000403683 C20orf166-AS1Q96NR2 134 aa13.69□□□□□ -0.22
HIST2H3A-201ENST00000403683 XP32Q5T750 250 aa13.68□□□□□ -0.22
HIST2H3A-201ENST00000403683 A8MUU9 505 aa13.67□□□□□ -0.22
HIST2H3A-201ENST00000403683 Q75L30 129 aa13.63□□□□□ -0.23
HIST2H3A-201ENST00000403683 C5orf47Q569G3 176 aa13.59□□□□□ -0.23
HIST2H3A-201ENST00000403683 HERC1Q15751 4861 aa13.59□□□□□ -0.23
HIST2H3A-201ENST00000403683 TRAV22A0A0B4J277 110 aa13.59□□□□□ -0.23
HIST2H3A-201ENST00000403683 COX7CP15954 63 aa13.59□□□□□ -0.23
HIST2H3A-201ENST00000403683 H0Y9P7 68 aa13.58□□□□□ -0.24
HIST2H3A-201ENST00000403683 MP68P56378 58 aa13.57□□□□□ -0.24
HIST2H3A-201ENST00000403683 Q5W150 140 aa13.57□□□□□ -0.24
HIST2H3A-201ENST00000403683 RPL37P61927 97 aaKnown RBP13.56□□□□□ -0.24
HIST2H3A-201ENST00000403683 ATP11AUNQ6ZP68 121 aa13.56□□□□□ -0.24
HIST2H3A-201ENST00000403683 ZCCHC13Q8WW36 166 aaKnown RBP13.56□□□□□ -0.24
HIST2H3A-201ENST00000403683 LPAP08519 4548 aa13.54□□□□□ -0.24
HIST2H3A-201ENST00000403683 PCP4P48539 62 aa13.53□□□□□ -0.24
HIST2H3A-201ENST00000403683 C20orf197Q8N268 126 aa13.49□□□□□ -0.25
HIST2H3A-201ENST00000403683 LINC00208Q96KT6 92 aa13.49□□□□□ -0.25
HIST2H3A-201ENST00000403683 C1orf64Q8NEQ6 169 aa13.44□□□□□ -0.26
HIST2H3A-201ENST00000403683 CCDC179H3BU77 68 aa13.44□□□□□ -0.26
HIST2H3A-201ENST00000403683 SNURFQ9Y675 71 aa13.44□□□□□ -0.26
HIST2H3A-201ENST00000403683 H3BPC8 53 aa13.41□□□□□ -0.26
HIST2H3A-201ENST00000403683 PCOTHQ58A44 107 aa13.39□□□□□ -0.27
HIST2H3A-201ENST00000403683 IGKV2D-30A0A075B6S6 120 aa13.37□□□□□ -0.27
HIST2H3A-201ENST00000403683 A0A0U1RQV1 116 aa13.37□□□□□ -0.27
HIST2H3A-201ENST00000403683 IGKV2-30P06310 120 aa13.37□□□□□ -0.27
HIST2H3A-201ENST00000403683 LOC101927531A0A1B0GV80 90 aa13.37□□□□□ -0.27
HIST2H3A-201ENST00000403683 LRP2P98164 4655 aa13.36□□□□□ -0.27
HIST2H3A-201ENST00000403683 SEC61BP60468 96 aaKnown RBP13.34□□□□□ -0.27
HIST2H3A-201ENST00000403683 HMCN2Q8NDA2 5059 aa13.33□□□□□ -0.28
HIST2H3A-201ENST00000403683 KLKP1Q107X0 134 aa13.31□□□□□ -0.28
HIST2H3A-201ENST00000403683 C7orf65Q6ZTY9 151 aa13.29□□□□□ -0.28
HIST2H3A-201ENST00000403683 CYP4F30PQ9H0H9 118 aa13.28□□□□□ -0.28
HIST2H3A-201ENST00000403683 SPINK7P58062 85 aa13.26□□□□□ -0.29
HIST2H3A-201ENST00000403683 CYSTM1Q9H1C7 97 aa13.21□□□□□ -0.29
HIST2H3A-201ENST00000403683 NDUFC1O43677 76 aa13.18□□□□□ -0.3
HIST2H3A-201ENST00000403683 H7BZZ5 65 aa13.11□□□□□ -0.31
HIST2H3A-201ENST00000403683 HRES1P13985 223 aa13.07□□□□□ -0.32
HIST2H3A-201ENST00000403683 MUC17Q685J3 4493 aa13.03□□□□□ -0.32
HIST2H3A-201ENST00000403683 C4orf26Q17RF5 130 aa13.02□□□□□ -0.33
HIST2H3A-201ENST00000403683 KRTAP4-1Q9BYQ7 146 aa12.97□□□□□ -0.33
HIST2H3A-201ENST00000403683 SPANXA2-OT1Q8N9U9 137 aa12.96□□□□□ -0.34
HIST2H3A-201ENST00000403683 TMEM258P61165 79 aa12.94□□□□□ -0.34
HIST2H3A-201ENST00000403683 RBM12B-AS1Q9P1G2 102 aa12.89□□□□□ -0.35
HIST2H3A-201ENST00000403683 FAM236DA0A1B0GTK5 79 aa12.89□□□□□ -0.35
HIST2H3A-201ENST00000403683 FAM236CP0DP71 79 aa12.89□□□□□ -0.35
HIST2H3A-201ENST00000403683 COX6B2Q6YFQ2 88 aa12.85□□□□□ -0.35
HIST2H3A-201ENST00000403683 ATP5EP56381 51 aaPredicted RBP12.83□□□□□ -0.35
HIST2H3A-201ENST00000403683 DMAC1Q96GE9 116 aa12.79□□□□□ -0.36
HIST2H3A-201ENST00000403683 MPLKIPQ8TAP9 179 aa12.78□□□□□ -0.36
HIST2H3A-201ENST00000403683 UBR4Q5T4S7 5183 aa12.76□□□□□ -0.37
HIST2H3A-201ENST00000403683 A8MUN3 132 aa12.76□□□□□ -0.37
HIST2H3A-201ENST00000403683 ACYP2P14621 99 aa12.76□□□□□ -0.37
HIST2H3A-201ENST00000403683 KRTAP3-1Q9BYR8 98 aa12.74□□□□□ -0.37
HIST2H3A-201ENST00000403683 MUC2Q02817 5179 aa12.73□□□□□ -0.37
HIST2H3A-201ENST00000403683 H1FX-AS1Q4G0G2 97 aa12.64□□□□□ -0.39
HIST2H3A-201ENST00000403683 RNF213Q63HN8 5207 aa12.64□□□□□ -0.39
HIST2H3A-201ENST00000403683 CHKB-CPT1BH3BT56 60 aa12.61□□□□□ -0.39
HIST2H3A-201ENST00000403683 COA5Q86WW8 74 aa12.61□□□□□ -0.39
HIST2H3A-201ENST00000403683 SERP1Q9Y6X1 66 aa12.55□□□□□ -0.4
HIST2H3A-201ENST00000403683 S4R3F8 94 aa12.51□□□□□ -0.41
HIST2H3A-201ENST00000403683 KRTAP19-2Q3LHN2 52 aa12.5□□□□□ -0.41
HIST2H3A-201ENST00000403683 LCA10Q71F78 164 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms