RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 FRYLO94915 3013 aa7.68□□□□□ -1.18
VAPA-202ENST00000400000 ATMQ13315 3056 aa7.68□□□□□ -1.18
VAPA-202ENST00000400000 ASH1LQ9NR48 2969 aaKnown RBP7.68□□□□□ -1.18
VAPA-202ENST00000400000 COL12A1Q99715 3063 aa7.63□□□□□ -1.19
VAPA-202ENST00000400000 UBR5O95071 2799 aaPredicted RBP7.62□□□□□ -1.19
VAPA-202ENST00000400000 IGSF10Q6WRI0 2623 aa7.61□□□□□ -1.19
VAPA-202ENST00000400000 KRTAP25-1Q3LHN0 102 aa7.61□□□□□ -1.19
VAPA-202ENST00000400000 NDUFAF8A1L188 74 aa7.6□□□□□ -1.19
VAPA-202ENST00000400000 KRTAP10-8P60410 259 aa7.59□□□□□ -1.19
VAPA-202ENST00000400000 ASPMQ8IZT6 3477 aa7.58□□□□□ -1.2
VAPA-202ENST00000400000 ADGRG4Q8IZF6 3080 aa7.57□□□□□ -1.2
VAPA-202ENST00000400000 KRTAP16-1A8MUX0 517 aa7.57□□□□□ -1.2
VAPA-202ENST00000400000 WDFY3Q8IZQ1 3526 aa7.56□□□□□ -1.2
VAPA-202ENST00000400000 APCP25054 2843 aa7.55□□□□□ -1.2
VAPA-202ENST00000400000 HIVEP1P15822 2718 aa7.55□□□□□ -1.2
VAPA-202ENST00000400000 TNP1P09430 55 aa7.55□□□□□ -1.2
VAPA-202ENST00000400000 UTP20O75691 2785 aaKnown RBP7.54□□□□□ -1.2
VAPA-202ENST00000400000 NSD1Q96L73 2696 aaPredicted RBP7.53□□□□□ -1.2
VAPA-202ENST00000400000 KMT2BQ9UMN6 2715 aaPredicted RBP7.52□□□□□ -1.2
VAPA-202ENST00000400000 ITPR1Q14643 2758 aa7.48□□□□□ -1.21
VAPA-202ENST00000400000 ASB16-AS1Q495Z4 193 aa7.47□□□□□ -1.21
VAPA-202ENST00000400000 RPS29P62273 56 aaKnown RBP7.46□□□□□ -1.22
VAPA-202ENST00000400000 A6NN06 94 aa7.45□□□□□ -1.22
VAPA-202ENST00000400000 KRTAP13-1Q8IUC0 172 aa7.44□□□□□ -1.22
VAPA-202ENST00000400000 ZZEF1O43149 2961 aa7.44□□□□□ -1.22
VAPA-202ENST00000400000 NBEAQ8NFP9 2946 aa7.43□□□□□ -1.22
VAPA-202ENST00000400000 LOC400499M0QZD8 3231 aa7.41□□□□□ -1.22
VAPA-202ENST00000400000 KRTAP10-10P60014 251 aa7.4□□□□□ -1.22
VAPA-202ENST00000400000 DCHS1Q96JQ0 3298 aa7.38□□□□□ -1.23
VAPA-202ENST00000400000 XP32Q5T750 250 aa7.36□□□□□ -1.23
VAPA-202ENST00000400000 DMXL1Q9Y485 3027 aa7.35□□□□□ -1.23
VAPA-202ENST00000400000 NBPF19A0A087WUL8 3843 aa7.34□□□□□ -1.24
VAPA-202ENST00000400000 CELSR2Q9HCU4 2923 aa7.33□□□□□ -1.24
VAPA-202ENST00000400000 ZFHX4Q86UP3 3567 aa7.26□□□□□ -1.25
VAPA-202ENST00000400000 RELNP78509 3460 aa7.26□□□□□ -1.25
VAPA-202ENST00000400000 TNRC18O15417 2968 aaPredicted RBP7.24□□□□□ -1.25
VAPA-202ENST00000400000 LAMA5O15230 3695 aa7.24□□□□□ -1.25
VAPA-202ENST00000400000 TENM4Q6N022 2769 aa7.24□□□□□ -1.25
VAPA-202ENST00000400000 KRTAP1-4P0C5Y4 121 aa7.21□□□□□ -1.25
VAPA-202ENST00000400000 DCHS2Q6V1P9 2916 aa7.2□□□□□ -1.26
VAPA-202ENST00000400000 KRTAP21-3Q3LHN1 58 aa7.2□□□□□ -1.26
VAPA-202ENST00000400000 CSMD1Q96PZ7 3565 aa7.19□□□□□ -1.26
VAPA-202ENST00000400000 FLNCQ14315 2725 aa7.16□□□□□ -1.26
VAPA-202ENST00000400000 H0YAA0 97 aa7.16□□□□□ -1.26
VAPA-202ENST00000400000 P0C880 135 aa7.12□□□□□ -1.27
VAPA-202ENST00000400000 CELSR1Q9NYQ6 3014 aa7.09□□□□□ -1.27
VAPA-202ENST00000400000 TENM1Q9UKZ4 2725 aa7.07□□□□□ -1.28
VAPA-202ENST00000400000 TPRXLQ17RH7 258 aa7.06□□□□□ -1.28
VAPA-202ENST00000400000 TENM2Q9NT68 2774 aa7.06□□□□□ -1.28
VAPA-202ENST00000400000 PRO2289Q9P1D8 64 aa7.05□□□□□ -1.28
VAPA-202ENST00000400000 FBN2P35556 2912 aa7.03□□□□□ -1.28
VAPA-202ENST00000400000 PP632Q6XCG6 107 aa7□□□□□ -1.29
VAPA-202ENST00000400000 KRTAP13-3Q3SY46 172 aa6.99□□□□□ -1.29
VAPA-202ENST00000400000 ZANQ9Y493 2812 aa6.98□□□□□ -1.29
VAPA-202ENST00000400000 NF1P21359 2839 aa6.98□□□□□ -1.29
VAPA-202ENST00000400000 DMDP11532 3685 aa6.97□□□□□ -1.29
VAPA-202ENST00000400000 PKD1L1Q8TDX9 2849 aa6.92□□□□□ -1.3
VAPA-202ENST00000400000 NIPBLQ6KC79 2804 aaeCLIP6.91□□□□□ -1.3
VAPA-202ENST00000400000 HRNRQ86YZ3 2850 aaPredicted RBP6.91□□□□□ -1.3
VAPA-202ENST00000400000 ZFHX3Q15911 3703 aa6.91□□□□□ -1.3
VAPA-202ENST00000400000 VWFP04275 2813 aa6.9□□□□□ -1.31
VAPA-202ENST00000400000 CUBNO60494 3623 aa6.89□□□□□ -1.31
VAPA-202ENST00000400000 SMG1Q96Q15 3661 aaKnown RBP6.88□□□□□ -1.31
VAPA-202ENST00000400000 KRTAP12-2P59991 146 aa6.87□□□□□ -1.31
VAPA-202ENST00000400000 SPENQ96T58 3664 aaKnown RBP6.87□□□□□ -1.31
VAPA-202ENST00000400000 SVEP1Q4LDE5 3571 aa6.86□□□□□ -1.31
VAPA-202ENST00000400000 TENM3Q9P273 2699 aa6.8□□□□□ -1.32
VAPA-202ENST00000400000 TGP01266 2768 aa6.79□□□□□ -1.32
VAPA-202ENST00000400000 CSMD2Q7Z408 3487 aa6.76□□□□□ -1.33
VAPA-202ENST00000400000 CRCT1Q9UGL9 99 aa6.73□□□□□ -1.33
VAPA-202ENST00000400000 MXRA5Q9NR99 2828 aa6.68□□□□□ -1.34
VAPA-202ENST00000400000 PDZD2O15018 2839 aa6.64□□□□□ -1.35
VAPA-202ENST00000400000 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
VAPA-202ENST00000400000 KRTAP12-1P59990 96 aa6.58□□□□□ -1.36
VAPA-202ENST00000400000 KRTAP13-4Q3LI77 160 aa6.57□□□□□ -1.36
VAPA-202ENST00000400000 MUC3AQ02505 3323 aa6.56□□□□□ -1.36
VAPA-202ENST00000400000 KRTAP3-1Q9BYR8 98 aa6.48□□□□□ -1.37
VAPA-202ENST00000400000 ANK3Q12955 4377 aaKnown RBP6.46□□□□□ -1.37
VAPA-202ENST00000400000 TRRAPQ9Y4A5 3859 aa6.46□□□□□ -1.38
VAPA-202ENST00000400000 FBN1P35555 2871 aaKnown RBP6.44□□□□□ -1.38
VAPA-202ENST00000400000 KRTAP4-5Q9BYR2 181 aa6.4□□□□□ -1.38
VAPA-202ENST00000400000 SRRM2Q9UQ35 2752 aaKnown RBP6.4□□□□□ -1.38
VAPA-202ENST00000400000 VPS13CQ709C8 3753 aa6.38□□□□□ -1.39
VAPA-202ENST00000400000 CSMD3Q7Z407 3707 aa6.36□□□□□ -1.39
VAPA-202ENST00000400000 BSNQ9UPA5 3926 aa6.32□□□□□ -1.4
VAPA-202ENST00000400000 COL7A1Q02388 2944 aa6.27□□□□□ -1.41
VAPA-202ENST00000400000 FBN3Q75N90 2809 aa6.26□□□□□ -1.41
VAPA-202ENST00000400000 MEGF8Q7Z7M0 2845 aa6.25□□□□□ -1.41
VAPA-202ENST00000400000 KRTAP10-6P60371 365 aaPredicted RBP6.24□□□□□ -1.41
VAPA-202ENST00000400000 HUWE1Q7Z6Z7 4374 aaKnown RBP6.23□□□□□ -1.41
VAPA-202ENST00000400000 KRTAP10-12P60413 245 aa6.21□□□□□ -1.42
VAPA-202ENST00000400000 OTOGQ6ZRI0 2925 aa6.19□□□□□ -1.42
VAPA-202ENST00000400000 MT1HL1P0DM35 61 aa6.19□□□□□ -1.42
VAPA-202ENST00000400000 LORP23490 312 aaPredicted RBP6.09□□□□□ -1.44
VAPA-202ENST00000400000 LCE3AQ5TA76 89 aa6.03□□□□□ -1.44
VAPA-202ENST00000400000 KRTAP3-3Q9BYR6 98 aa6.02□□□□□ -1.45
VAPA-202ENST00000400000 KRTAP12-3P60328 96 aa5.98□□□□□ -1.45
VAPA-202ENST00000400000 AKAP9Q99996 3911 aa5.98□□□□□ -1.45
VAPA-202ENST00000400000 KRTAP3-2Q9BYR7 98 aa5.97□□□□□ -1.45
VAPA-202ENST00000400000 KRTAP10-5P60370 271 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms