RNA–Protein interactions for RNA: ENST00000399959.6

DDX3X-201, Transcript of DEAD-box helicase 3 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX3X, Length 5,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-201ENST00000399959 KRTAP23-1A1A580 65 aa7.1□□□□□ -1.27
DDX3X-201ENST00000399959 BRCA2P51587 3418 aa7.08□□□□□ -1.28
DDX3X-201ENST00000399959 DMXL2Q8TDJ6 3036 aa7.04□□□□□ -1.28
DDX3X-201ENST00000399959 XP32Q5T750 250 aa7.03□□□□□ -1.28
DDX3X-201ENST00000399959 UTP20O75691 2785 aaKnown RBP7.02□□□□□ -1.28
DDX3X-201ENST00000399959 DNAH14Q0VDD8 3507 aa7.02□□□□□ -1.29
DDX3X-201ENST00000399959 HIVEP1P15822 2718 aa7.02□□□□□ -1.29
DDX3X-201ENST00000399959 TPRXLQ17RH7 258 aa7.01□□□□□ -1.29
DDX3X-201ENST00000399959 ADGRG4Q8IZF6 3080 aa7.01□□□□□ -1.29
DDX3X-201ENST00000399959 ITPR2Q14571 2701 aa7□□□□□ -1.29
DDX3X-201ENST00000399959 ZZEF1O43149 2961 aa6.99□□□□□ -1.29
DDX3X-201ENST00000399959 IGSF10Q6WRI0 2623 aa6.98□□□□□ -1.29
DDX3X-201ENST00000399959 KRTAP12-2P59991 146 aa6.97□□□□□ -1.29
DDX3X-201ENST00000399959 VCANP13611 3396 aa6.96□□□□□ -1.3
DDX3X-201ENST00000399959 REV3LO60673 3130 aa6.95□□□□□ -1.3
DDX3X-201ENST00000399959 TACC2O95359 2948 aa6.95□□□□□ -1.3
DDX3X-201ENST00000399959 LAMA1P25391 3075 aa6.94□□□□□ -1.3
DDX3X-201ENST00000399959 ATMQ13315 3056 aa6.93□□□□□ -1.3
DDX3X-201ENST00000399959 KMT2BQ9UMN6 2715 aaPredicted RBP6.91□□□□□ -1.3
DDX3X-201ENST00000399959 CDH23Q9H251 3354 aa6.9□□□□□ -1.3
DDX3X-201ENST00000399959 FRYLO94915 3013 aa6.88□□□□□ -1.31
DDX3X-201ENST00000399959 NIPBLQ6KC79 2804 aaeCLIP6.87□□□□□ -1.31
DDX3X-201ENST00000399959 BOD1L1Q8NFC6 3051 aa6.85□□□□□ -1.31
DDX3X-201ENST00000399959 COL12A1Q99715 3063 aa6.85□□□□□ -1.31
DDX3X-201ENST00000399959 COL6A3P12111 3177 aa6.84□□□□□ -1.31
DDX3X-201ENST00000399959 CELSR2Q9HCU4 2923 aa6.84□□□□□ -1.31
DDX3X-201ENST00000399959 TGP01266 2768 aa6.83□□□□□ -1.32
DDX3X-201ENST00000399959 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
DDX3X-201ENST00000399959 A0A1B0GVY2 172 aa6.81□□□□□ -1.32
DDX3X-201ENST00000399959 FLNCQ14315 2725 aa6.8□□□□□ -1.32
DDX3X-201ENST00000399959 KRTAP13-4Q3LI77 160 aa6.79□□□□□ -1.32
DDX3X-201ENST00000399959 CFAP47Q6ZTR5 3102 aa6.78□□□□□ -1.32
DDX3X-201ENST00000399959 KRTAP15-1Q3LI76 137 aa6.74□□□□□ -1.33
DDX3X-201ENST00000399959 KRTAP3-1Q9BYR8 98 aa6.72□□□□□ -1.33
DDX3X-201ENST00000399959 DCHS2Q6V1P9 2916 aa6.72□□□□□ -1.33
DDX3X-201ENST00000399959 TNRC18O15417 2968 aaPredicted RBP6.69□□□□□ -1.34
DDX3X-201ENST00000399959 SZT2Q5T011 3432 aa6.68□□□□□ -1.34
DDX3X-201ENST00000399959 HRNRQ86YZ3 2850 aaPredicted RBP6.67□□□□□ -1.34
DDX3X-201ENST00000399959 ZANQ9Y493 2812 aa6.67□□□□□ -1.34
DDX3X-201ENST00000399959 DMXL1Q9Y485 3027 aa6.64□□□□□ -1.35
DDX3X-201ENST00000399959 KRTAP10-6P60371 365 aaPredicted RBP6.62□□□□□ -1.35
DDX3X-201ENST00000399959 FBN2P35556 2912 aa6.6□□□□□ -1.35
DDX3X-201ENST00000399959 NF1P21359 2839 aa6.59□□□□□ -1.35
DDX3X-201ENST00000399959 PRO2289Q9P1D8 64 aa6.58□□□□□ -1.36
DDX3X-201ENST00000399959 KRTAP10-10P60014 251 aa6.58□□□□□ -1.36
DDX3X-201ENST00000399959 INE1O15225 51 aa6.54□□□□□ -1.36
DDX3X-201ENST00000399959 CRYBG3Q68DQ2 2970 aa6.53□□□□□ -1.36
DDX3X-201ENST00000399959 SPEGQ15772 3267 aa6.53□□□□□ -1.36
DDX3X-201ENST00000399959 KRTAP3-3Q9BYR6 98 aa6.52□□□□□ -1.37
DDX3X-201ENST00000399959 KRTAP3-2Q9BYR7 98 aa6.52□□□□□ -1.37
DDX3X-201ENST00000399959 EYSQ5T1H1 3165 aa6.49□□□□□ -1.37
DDX3X-201ENST00000399959 TENM4Q6N022 2769 aa6.48□□□□□ -1.37
DDX3X-201ENST00000399959 TENM3Q9P273 2699 aa6.44□□□□□ -1.38
DDX3X-201ENST00000399959 USP34Q70CQ2 3546 aa6.44□□□□□ -1.38
DDX3X-201ENST00000399959 CELSR1Q9NYQ6 3014 aa6.44□□□□□ -1.38
DDX3X-201ENST00000399959 TENM2Q9NT68 2774 aa6.43□□□□□ -1.38
DDX3X-201ENST00000399959 PDZD2O15018 2839 aa6.39□□□□□ -1.39
DDX3X-201ENST00000399959 TENM1Q9UKZ4 2725 aa6.39□□□□□ -1.39
DDX3X-201ENST00000399959 LOC400499M0QZD8 3231 aa6.36□□□□□ -1.39
DDX3X-201ENST00000399959 MXRA5Q9NR99 2828 aa6.35□□□□□ -1.39
DDX3X-201ENST00000399959 SPTBN5Q9NRC6 3674 aaKnown RBP6.35□□□□□ -1.39
DDX3X-201ENST00000399959 DCHS1Q96JQ0 3298 aa6.28□□□□□ -1.4
DDX3X-201ENST00000399959 KRTAP21-3Q3LHN1 58 aa6.25□□□□□ -1.41
DDX3X-201ENST00000399959 MYO15AQ9UKN7 3530 aa6.22□□□□□ -1.41
DDX3X-201ENST00000399959 WDFY3Q8IZQ1 3526 aa6.22□□□□□ -1.41
DDX3X-201ENST00000399959 CSMD1Q96PZ7 3565 aa6.19□□□□□ -1.42
DDX3X-201ENST00000399959 PKD1L1Q8TDX9 2849 aa6.18□□□□□ -1.42
DDX3X-201ENST00000399959 SRRM2Q9UQ35 2752 aaKnown RBP6.1□□□□□ -1.43
DDX3X-201ENST00000399959 ZFHX4Q86UP3 3567 aa6.09□□□□□ -1.43
DDX3X-201ENST00000399959 RELNP78509 3460 aa6.06□□□□□ -1.44
DDX3X-201ENST00000399959 VWFP04275 2813 aa6.03□□□□□ -1.44
DDX3X-201ENST00000399959 MEGF8Q7Z7M0 2845 aa6.03□□□□□ -1.44
DDX3X-201ENST00000399959 ZFHX3Q15911 3703 aa6.03□□□□□ -1.44
DDX3X-201ENST00000399959 FBN3Q75N90 2809 aa6.02□□□□□ -1.45
DDX3X-201ENST00000399959 KRTAP10-12P60413 245 aa5.98□□□□□ -1.45
DDX3X-201ENST00000399959 ASPMQ8IZT6 3477 aa5.96□□□□□ -1.46
DDX3X-201ENST00000399959 SMG1Q96Q15 3661 aaKnown RBP5.94□□□□□ -1.46
DDX3X-201ENST00000399959 KRTAP12-3P60328 96 aa5.92□□□□□ -1.46
DDX3X-201ENST00000399959 LCE3AQ5TA76 89 aa5.89□□□□□ -1.47
DDX3X-201ENST00000399959 LAMA5O15230 3695 aa5.86□□□□□ -1.47
DDX3X-201ENST00000399959 FBN1P35555 2871 aaKnown RBP5.83□□□□□ -1.48
DDX3X-201ENST00000399959 MT1HL1P0DM35 61 aa5.8□□□□□ -1.48
DDX3X-201ENST00000399959 LORP23490 312 aaPredicted RBP5.8□□□□□ -1.48
DDX3X-201ENST00000399959 SVEP1Q4LDE5 3571 aa5.8□□□□□ -1.48
DDX3X-201ENST00000399959 ANK3Q12955 4377 aaKnown RBP5.78□□□□□ -1.48
DDX3X-201ENST00000399959 MUC3AQ02505 3323 aa5.78□□□□□ -1.48
DDX3X-201ENST00000399959 CRCT1Q9UGL9 99 aa5.76□□□□□ -1.49
DDX3X-201ENST00000399959 COL7A1Q02388 2944 aa5.76□□□□□ -1.49
DDX3X-201ENST00000399959 KRTAP10-4P60372 401 aaPredicted RBP5.72□□□□□ -1.49
DDX3X-201ENST00000399959 CUBNO60494 3623 aa5.71□□□□□ -1.49
DDX3X-201ENST00000399959 DMDP11532 3685 aa5.71□□□□□ -1.5
DDX3X-201ENST00000399959 NBPF19A0A087WUL8 3843 aa5.7□□□□□ -1.5
DDX3X-201ENST00000399959 OTOGQ6ZRI0 2925 aa5.69□□□□□ -1.5
DDX3X-201ENST00000399959 HUWE1Q7Z6Z7 4374 aaKnown RBP5.59□□□□□ -1.51
DDX3X-201ENST00000399959 TRRAPQ9Y4A5 3859 aa5.58□□□□□ -1.52
DDX3X-201ENST00000399959 SPENQ96T58 3664 aaKnown RBP5.58□□□□□ -1.52
DDX3X-201ENST00000399959 ALMS1Q8TCU4 4167 aa5.57□□□□□ -1.52
DDX3X-201ENST00000399959 KRTAP10-5P60370 271 aa5.57□□□□□ -1.52
DDX3X-201ENST00000399959 LCE2DQ5TA82 110 aaPredicted RBP5.51□□□□□ -1.53
DDX3X-201ENST00000399959 CSMD2Q7Z408 3487 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms