RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 FLNCQ14315 2725 aa6.5□□□□□ -1.37
CCDC144A-206ENST00000399273 HIVEP1P15822 2718 aa6.5□□□□□ -1.37
CCDC144A-206ENST00000399273 COL12A1Q99715 3063 aa6.49□□□□□ -1.37
CCDC144A-206ENST00000399273 KRTAP25-1Q3LHN0 102 aa6.48□□□□□ -1.37
CCDC144A-206ENST00000399273 SPEGQ15772 3267 aa6.48□□□□□ -1.37
CCDC144A-206ENST00000399273 A8MU10 97 aa6.46□□□□□ -1.38
CCDC144A-206ENST00000399273 VCANP13611 3396 aa6.45□□□□□ -1.38
CCDC144A-206ENST00000399273 BOD1L1Q8NFC6 3051 aa6.44□□□□□ -1.38
CCDC144A-206ENST00000399273 KRTAP13-2Q52LG2 175 aa6.44□□□□□ -1.38
CCDC144A-206ENST00000399273 C10orf95Q9H7T3 257 aa6.44□□□□□ -1.38
CCDC144A-206ENST00000399273 KRTAP11-1Q8IUC1 163 aa6.43□□□□□ -1.38
CCDC144A-206ENST00000399273 CELSR2Q9HCU4 2923 aa6.43□□□□□ -1.38
CCDC144A-206ENST00000399273 CFAP47Q6ZTR5 3102 aa6.42□□□□□ -1.38
CCDC144A-206ENST00000399273 ZZEF1O43149 2961 aa6.41□□□□□ -1.38
CCDC144A-206ENST00000399273 KRTAP10-8P60410 259 aa6.4□□□□□ -1.38
CCDC144A-206ENST00000399273 PRO2289Q9P1D8 64 aa6.38□□□□□ -1.39
CCDC144A-206ENST00000399273 NF1P21359 2839 aa6.37□□□□□ -1.39
CCDC144A-206ENST00000399273 NBEAQ8NFP9 2946 aa6.37□□□□□ -1.39
CCDC144A-206ENST00000399273 KRTAP13-1Q8IUC0 172 aa6.37□□□□□ -1.39
CCDC144A-206ENST00000399273 TACC2O95359 2948 aa6.36□□□□□ -1.39
CCDC144A-206ENST00000399273 PP632Q6XCG6 107 aa6.36□□□□□ -1.39
CCDC144A-206ENST00000399273 TNRC18O15417 2968 aaPredicted RBP6.35□□□□□ -1.39
CCDC144A-206ENST00000399273 ADGRG4Q8IZF6 3080 aa6.33□□□□□ -1.4
CCDC144A-206ENST00000399273 SZT2Q5T011 3432 aa6.32□□□□□ -1.4
CCDC144A-206ENST00000399273 ATMQ13315 3056 aa6.3□□□□□ -1.4
CCDC144A-206ENST00000399273 NDUFAF8A1L188 74 aa6.3□□□□□ -1.4
CCDC144A-206ENST00000399273 SPTBN5Q9NRC6 3674 aaKnown RBP6.3□□□□□ -1.4
CCDC144A-206ENST00000399273 A6NN06 94 aa6.28□□□□□ -1.4
CCDC144A-206ENST00000399273 TENM4Q6N022 2769 aa6.28□□□□□ -1.4
CCDC144A-206ENST00000399273 NBPF19A0A087WUL8 3843 aa6.27□□□□□ -1.4
CCDC144A-206ENST00000399273 KRTAP7-1Q8IUC3 87 aa6.27□□□□□ -1.41
CCDC144A-206ENST00000399273 DCHS2Q6V1P9 2916 aa6.27□□□□□ -1.41
CCDC144A-206ENST00000399273 NIPBLQ6KC79 2804 aaeCLIP6.27□□□□□ -1.41
CCDC144A-206ENST00000399273 TENM3Q9P273 2699 aa6.26□□□□□ -1.41
CCDC144A-206ENST00000399273 A0A1B0GVY2 172 aa6.26□□□□□ -1.41
CCDC144A-206ENST00000399273 CELSR1Q9NYQ6 3014 aa6.26□□□□□ -1.41
CCDC144A-206ENST00000399273 XP32Q5T750 250 aa6.25□□□□□ -1.41
CCDC144A-206ENST00000399273 KRTAP10-10P60014 251 aa6.25□□□□□ -1.41
CCDC144A-206ENST00000399273 TPRXLQ17RH7 258 aa6.25□□□□□ -1.41
CCDC144A-206ENST00000399273 EYSQ5T1H1 3165 aa6.21□□□□□ -1.42
CCDC144A-206ENST00000399273 DMXL1Q9Y485 3027 aa6.18□□□□□ -1.42
CCDC144A-206ENST00000399273 P0C880 135 aa6.14□□□□□ -1.43
CCDC144A-206ENST00000399273 TGP01266 2768 aa6.13□□□□□ -1.43
CCDC144A-206ENST00000399273 ZANQ9Y493 2812 aa6.12□□□□□ -1.43
CCDC144A-206ENST00000399273 FBN2P35556 2912 aa6.11□□□□□ -1.43
CCDC144A-206ENST00000399273 WDFY3Q8IZQ1 3526 aa6.08□□□□□ -1.44
CCDC144A-206ENST00000399273 KRTAP1-4P0C5Y4 121 aa6.07□□□□□ -1.44
CCDC144A-206ENST00000399273 PDZD2O15018 2839 aa6.06□□□□□ -1.44
CCDC144A-206ENST00000399273 PKD1L1Q8TDX9 2849 aa6.06□□□□□ -1.44
CCDC144A-206ENST00000399273 VWFP04275 2813 aa6.04□□□□□ -1.44
CCDC144A-206ENST00000399273 ASPMQ8IZT6 3477 aa6.04□□□□□ -1.44
CCDC144A-206ENST00000399273 HRNRQ86YZ3 2850 aaPredicted RBP6.03□□□□□ -1.44
CCDC144A-206ENST00000399273 H0YAA0 97 aa6□□□□□ -1.45
CCDC144A-206ENST00000399273 KRTAP13-3Q3SY46 172 aa6□□□□□ -1.45
CCDC144A-206ENST00000399273 ZFHX4Q86UP3 3567 aa5.99□□□□□ -1.45
CCDC144A-206ENST00000399273 LOC400499M0QZD8 3231 aa5.96□□□□□ -1.45
CCDC144A-206ENST00000399273 TENM2Q9NT68 2774 aa5.96□□□□□ -1.46
CCDC144A-206ENST00000399273 MYO15AQ9UKN7 3530 aa5.94□□□□□ -1.46
CCDC144A-206ENST00000399273 MXRA5Q9NR99 2828 aa5.94□□□□□ -1.46
CCDC144A-206ENST00000399273 LAMA5O15230 3695 aa5.92□□□□□ -1.46
CCDC144A-206ENST00000399273 ZFHX3Q15911 3703 aa5.9□□□□□ -1.46
CCDC144A-206ENST00000399273 DCHS1Q96JQ0 3298 aa5.77□□□□□ -1.49
CCDC144A-206ENST00000399273 COL7A1Q02388 2944 aa5.76□□□□□ -1.49
CCDC144A-206ENST00000399273 SPENQ96T58 3664 aaKnown RBP5.75□□□□□ -1.49
CCDC144A-206ENST00000399273 RELNP78509 3460 aa5.73□□□□□ -1.49
CCDC144A-206ENST00000399273 KRTAP13-4Q3LI77 160 aa5.72□□□□□ -1.49
CCDC144A-206ENST00000399273 KRTAP12-2P59991 146 aa5.7□□□□□ -1.5
CCDC144A-206ENST00000399273 DMDP11532 3685 aa5.69□□□□□ -1.5
CCDC144A-206ENST00000399273 CSMD1Q96PZ7 3565 aa5.69□□□□□ -1.5
CCDC144A-206ENST00000399273 SMG1Q96Q15 3661 aaKnown RBP5.66□□□□□ -1.5
CCDC144A-206ENST00000399273 SRRM2Q9UQ35 2752 aaKnown RBP5.63□□□□□ -1.51
CCDC144A-206ENST00000399273 KRTAP15-1Q3LI76 137 aa5.62□□□□□ -1.51
CCDC144A-206ENST00000399273 MEGF8Q7Z7M0 2845 aa5.61□□□□□ -1.51
CCDC144A-206ENST00000399273 KRTAP12-1P59990 96 aa5.54□□□□□ -1.52
CCDC144A-206ENST00000399273 FBN1P35555 2871 aaKnown RBP5.51□□□□□ -1.53
CCDC144A-206ENST00000399273 TRRAPQ9Y4A5 3859 aa5.51□□□□□ -1.53
CCDC144A-206ENST00000399273 FBN3Q75N90 2809 aa5.5□□□□□ -1.53
CCDC144A-206ENST00000399273 VPS13CQ709C8 3753 aa5.47□□□□□ -1.53
CCDC144A-206ENST00000399273 SVEP1Q4LDE5 3571 aa5.38□□□□□ -1.55
CCDC144A-206ENST00000399273 KRTAP10-12P60413 245 aa5.36□□□□□ -1.55
CCDC144A-206ENST00000399273 MUC3AQ02505 3323 aa5.36□□□□□ -1.55
CCDC144A-206ENST00000399273 CRCT1Q9UGL9 99 aa5.34□□□□□ -1.55
CCDC144A-206ENST00000399273 CUBNO60494 3623 aa5.34□□□□□ -1.55
CCDC144A-206ENST00000399273 BSNQ9UPA5 3926 aa5.33□□□□□ -1.56
CCDC144A-206ENST00000399273 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
CCDC144A-206ENST00000399273 INE1O15225 51 aa5.28□□□□□ -1.56
CCDC144A-206ENST00000399273 OTOGQ6ZRI0 2925 aa5.25□□□□□ -1.57
CCDC144A-206ENST00000399273 AKAP9Q99996 3911 aa5.25□□□□□ -1.57
CCDC144A-206ENST00000399273 CSMD2Q7Z408 3487 aa5.22□□□□□ -1.57
CCDC144A-206ENST00000399273 CSMD3Q7Z407 3707 aa5.22□□□□□ -1.57
CCDC144A-206ENST00000399273 KRTAP10-6P60371 365 aaPredicted RBP5.2□□□□□ -1.58
CCDC144A-206ENST00000399273 ALMS1Q8TCU4 4167 aa5.17□□□□□ -1.58
CCDC144A-206ENST00000399273 MT1HL1P0DM35 61 aa5.14□□□□□ -1.59
CCDC144A-206ENST00000399273 KRTAP12-3P60328 96 aa5.11□□□□□ -1.59
CCDC144A-206ENST00000399273 ANK3Q12955 4377 aaKnown RBP5.06□□□□□ -1.6
CCDC144A-206ENST00000399273 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
CCDC144A-206ENST00000399273 KRTAP8-1Q8IUC2 63 aa5.03□□□□□ -1.6
CCDC144A-206ENST00000399273 ZNF469Q96JG9 3925 aaPredicted RBP4.99□□□□□ -1.61
CCDC144A-206ENST00000399273 KRTAP3-3Q9BYR6 98 aa4.98□□□□□ -1.61
CCDC144A-206ENST00000399273 KRTAP4-5Q9BYR2 181 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms