RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 APCP25054 2843 aa4.66□□□□□ -1.66
CTNND1-205ENST00000399050 CFAP47Q6ZTR5 3102 aa4.65□□□□□ -1.67
CTNND1-205ENST00000399050 TACC2O95359 2948 aa4.63□□□□□ -1.67
CTNND1-205ENST00000399050 TNP1P09430 55 aa4.63□□□□□ -1.67
CTNND1-205ENST00000399050 NOTCH1P46531 2555 aa4.62□□□□□ -1.67
CTNND1-205ENST00000399050 P0C880 135 aa4.62□□□□□ -1.67
CTNND1-205ENST00000399050 ATMQ13315 3056 aa4.62□□□□□ -1.67
CTNND1-205ENST00000399050 BAHCC1Q9P281 2608 aa4.61□□□□□ -1.67
CTNND1-205ENST00000399050 ASH1LQ9NR48 2969 aaKnown RBP4.61□□□□□ -1.67
CTNND1-205ENST00000399050 COL6A5A8TX70 2615 aa4.6□□□□□ -1.67
CTNND1-205ENST00000399050 IGSF10Q6WRI0 2623 aa4.6□□□□□ -1.67
CTNND1-205ENST00000399050 KMT2BQ9UMN6 2715 aaPredicted RBP4.58□□□□□ -1.68
CTNND1-205ENST00000399050 DMXL2Q8TDJ6 3036 aa4.58□□□□□ -1.68
CTNND1-205ENST00000399050 ITPR2Q14571 2701 aa4.58□□□□□ -1.68
CTNND1-205ENST00000399050 KRTAP1-4P0C5Y4 121 aa4.58□□□□□ -1.68
CTNND1-205ENST00000399050 STAB1Q9NY15 2570 aa4.58□□□□□ -1.68
CTNND1-205ENST00000399050 MYO15AQ9UKN7 3530 aa4.57□□□□□ -1.68
CTNND1-205ENST00000399050 PP632Q6XCG6 107 aa4.57□□□□□ -1.68
CTNND1-205ENST00000399050 STAB2Q8WWQ8 2551 aa4.56□□□□□ -1.68
CTNND1-205ENST00000399050 UTP20O75691 2785 aaKnown RBP4.56□□□□□ -1.68
CTNND1-205ENST00000399050 UBR5O95071 2799 aaPredicted RBP4.55□□□□□ -1.68
CTNND1-205ENST00000399050 COL12A1Q99715 3063 aa4.54□□□□□ -1.68
CTNND1-205ENST00000399050 NSD1Q96L73 2696 aaPredicted RBP4.53□□□□□ -1.68
CTNND1-205ENST00000399050 DCHS1Q96JQ0 3298 aa4.52□□□□□ -1.69
CTNND1-205ENST00000399050 TNRC18O15417 2968 aaPredicted RBP4.51□□□□□ -1.69
CTNND1-205ENST00000399050 XP32Q5T750 250 aa4.51□□□□□ -1.69
CTNND1-205ENST00000399050 HIVEP1P15822 2718 aa4.51□□□□□ -1.69
CTNND1-205ENST00000399050 KRTAP13-3Q3SY46 172 aa4.51□□□□□ -1.69
CTNND1-205ENST00000399050 HRNRQ86YZ3 2850 aaPredicted RBP4.5□□□□□ -1.69
CTNND1-205ENST00000399050 EYSQ5T1H1 3165 aa4.5□□□□□ -1.69
CTNND1-205ENST00000399050 KRTAP10-8P60410 259 aa4.49□□□□□ -1.69
CTNND1-205ENST00000399050 WDFY3Q8IZQ1 3526 aa4.49□□□□□ -1.69
CTNND1-205ENST00000399050 LOC400499M0QZD8 3231 aa4.48□□□□□ -1.69
CTNND1-205ENST00000399050 DMXL1Q9Y485 3027 aa4.45□□□□□ -1.7
CTNND1-205ENST00000399050 CSMD1Q96PZ7 3565 aa4.42□□□□□ -1.7
CTNND1-205ENST00000399050 CELSR2Q9HCU4 2923 aa4.41□□□□□ -1.7
CTNND1-205ENST00000399050 FLNCQ14315 2725 aa4.41□□□□□ -1.7
CTNND1-205ENST00000399050 ASPMQ8IZT6 3477 aa4.4□□□□□ -1.7
CTNND1-205ENST00000399050 A0A1B0GVY2 172 aa4.4□□□□□ -1.71
CTNND1-205ENST00000399050 ZFHX4Q86UP3 3567 aa4.39□□□□□ -1.71
CTNND1-205ENST00000399050 KRTAP12-2P59991 146 aa4.39□□□□□ -1.71
CTNND1-205ENST00000399050 CRYBG3Q68DQ2 2970 aa4.38□□□□□ -1.71
CTNND1-205ENST00000399050 ZANQ9Y493 2812 aa4.37□□□□□ -1.71
CTNND1-205ENST00000399050 FBN2P35556 2912 aa4.36□□□□□ -1.71
CTNND1-205ENST00000399050 DCHS2Q6V1P9 2916 aa4.35□□□□□ -1.71
CTNND1-205ENST00000399050 TPRXLQ17RH7 258 aa4.35□□□□□ -1.71
CTNND1-205ENST00000399050 NIPBLQ6KC79 2804 aaeCLIP4.33□□□□□ -1.721e-6■□□□□ 9
CTNND1-205ENST00000399050 SMG1Q96Q15 3661 aaKnown RBP4.3□□□□□ -1.72
CTNND1-205ENST00000399050 RELNP78509 3460 aa4.3□□□□□ -1.72
CTNND1-205ENST00000399050 TGP01266 2768 aa4.29□□□□□ -1.72
CTNND1-205ENST00000399050 CELSR1Q9NYQ6 3014 aa4.29□□□□□ -1.72
CTNND1-205ENST00000399050 LAMA5O15230 3695 aa4.29□□□□□ -1.72
CTNND1-205ENST00000399050 KRTAP12-1P59990 96 aa4.28□□□□□ -1.72
CTNND1-205ENST00000399050 KRTAP3-1Q9BYR8 98 aa4.27□□□□□ -1.73
CTNND1-205ENST00000399050 NF1P21359 2839 aa4.25□□□□□ -1.73
CTNND1-205ENST00000399050 PRO2289Q9P1D8 64 aa4.25□□□□□ -1.73
CTNND1-205ENST00000399050 KRTAP13-4Q3LI77 160 aa4.24□□□□□ -1.73
CTNND1-205ENST00000399050 KRTAP10-10P60014 251 aa4.22□□□□□ -1.73
CTNND1-205ENST00000399050 MXRA5Q9NR99 2828 aa4.2□□□□□ -1.74
CTNND1-205ENST00000399050 KRTAP21-3Q3LHN1 58 aa4.19□□□□□ -1.74
CTNND1-205ENST00000399050 DMDP11532 3685 aa4.17□□□□□ -1.74
CTNND1-205ENST00000399050 SVEP1Q4LDE5 3571 aa4.16□□□□□ -1.74
CTNND1-205ENST00000399050 KRTAP10-6P60371 365 aaPredicted RBP4.16□□□□□ -1.74
CTNND1-205ENST00000399050 NBPF19A0A087WUL8 3843 aa4.14□□□□□ -1.75
CTNND1-205ENST00000399050 KRTAP15-1Q3LI76 137 aa4.14□□□□□ -1.75
CTNND1-205ENST00000399050 TENM3Q9P273 2699 aa4.13□□□□□ -1.75
CTNND1-205ENST00000399050 ANK3Q12955 4377 aaKnown RBP4.11□□□□□ -1.75
CTNND1-205ENST00000399050 TENM4Q6N022 2769 aa4.11□□□□□ -1.75
CTNND1-205ENST00000399050 TENM1Q9UKZ4 2725 aa4.08□□□□□ -1.76
CTNND1-205ENST00000399050 SPENQ96T58 3664 aaKnown RBP4.07□□□□□ -1.76
CTNND1-205ENST00000399050 TENM2Q9NT68 2774 aa4.04□□□□□ -1.76
CTNND1-205ENST00000399050 BSNQ9UPA5 3926 aa4.03□□□□□ -1.76
CTNND1-205ENST00000399050 PDZD2O15018 2839 aa4.02□□□□□ -1.77
CTNND1-205ENST00000399050 ZFHX3Q15911 3703 aa4.02□□□□□ -1.77
CTNND1-205ENST00000399050 KRTAP3-2Q9BYR7 98 aa4.02□□□□□ -1.77
CTNND1-205ENST00000399050 KRTAP3-3Q9BYR6 98 aa4□□□□□ -1.77
CTNND1-205ENST00000399050 CUBNO60494 3623 aa3.99□□□□□ -1.77
CTNND1-205ENST00000399050 INE1O15225 51 aa3.96□□□□□ -1.78
CTNND1-205ENST00000399050 VPS13CQ709C8 3753 aa3.95□□□□□ -1.78
CTNND1-205ENST00000399050 HUWE1Q7Z6Z7 4374 aaKnown RBP3.95□□□□□ -1.78
CTNND1-205ENST00000399050 PKD1L1Q8TDX9 2849 aa3.94□□□□□ -1.78
CTNND1-205ENST00000399050 TRRAPQ9Y4A5 3859 aa3.91□□□□□ -1.78
CTNND1-205ENST00000399050 CSMD2Q7Z408 3487 aa3.89□□□□□ -1.79
CTNND1-205ENST00000399050 VWFP04275 2813 aa3.88□□□□□ -1.79
CTNND1-205ENST00000399050 AKAP9Q99996 3911 aa3.88□□□□□ -1.79
CTNND1-205ENST00000399050 FBN3Q75N90 2809 aa3.87□□□□□ -1.79
CTNND1-205ENST00000399050 MEGF8Q7Z7M0 2845 aa3.87□□□□□ -1.79
CTNND1-205ENST00000399050 MUC3AQ02505 3323 aa3.87□□□□□ -1.79
CTNND1-205ENST00000399050 CRCT1Q9UGL9 99 aa3.84□□□□□ -1.79
CTNND1-205ENST00000399050 FBN1P35555 2871 aaKnown RBP3.83□□□□□ -1.8
CTNND1-205ENST00000399050 SRRM2Q9UQ35 2752 aaKnown RBP3.82□□□□□ -1.8
CTNND1-205ENST00000399050 MT1HL1P0DM35 61 aa3.81□□□□□ -1.8
CTNND1-205ENST00000399050 OTOGQ6ZRI0 2925 aa3.81□□□□□ -1.8
CTNND1-205ENST00000399050 ALMS1Q8TCU4 4167 aa3.79□□□□□ -1.8
CTNND1-205ENST00000399050 KRTAP10-12P60413 245 aa3.78□□□□□ -1.8
CTNND1-205ENST00000399050 KRTAP10-4P60372 401 aaPredicted RBP3.76□□□□□ -1.81
CTNND1-205ENST00000399050 KRTAP23-1A1A580 65 aa3.76□□□□□ -1.81
CTNND1-205ENST00000399050 CSMD3Q7Z407 3707 aa3.75□□□□□ -1.81
CTNND1-205ENST00000399050 LCE3AQ5TA76 89 aa3.74□□□□□ -1.81
CTNND1-205ENST00000399050 LORP23490 312 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms