RNA–Protein interactions for RNA: ENST00000398870.7

PIK3C3-202, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 2 BASIC

Gene PIK3C3, Length 9,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-202ENST00000398870 TGP01266 2768 aa3.46□□□□□ -1.86
PIK3C3-202ENST00000398870 KALRNO60229 2985 aa3.45□□□□□ -1.86
PIK3C3-202ENST00000398870 CFAP54Q96N23 3096 aa3.45□□□□□ -1.86
PIK3C3-202ENST00000398870 KRTAP7-1Q8IUC3 87 aa3.45□□□□□ -1.86
PIK3C3-202ENST00000398870 KRTAP1-4P0C5Y4 121 aa3.43□□□□□ -1.86
PIK3C3-202ENST00000398870 MGAQ8IWI9 3026 aa3.43□□□□□ -1.86
PIK3C3-202ENST00000398870 WDFY4Q6ZS81 3184 aa3.43□□□□□ -1.86
PIK3C3-202ENST00000398870 LRBAP50851 2863 aa3.42□□□□□ -1.86
PIK3C3-202ENST00000398870 HRNRQ86YZ3 2850 aaPredicted RBP3.41□□□□□ -1.86
PIK3C3-202ENST00000398870 CRCT1Q9UGL9 99 aa3.41□□□□□ -1.86
PIK3C3-202ENST00000398870 TACC2O95359 2948 aa3.38□□□□□ -1.87
PIK3C3-202ENST00000398870 KRTAP10-6P60371 365 aaPredicted RBP3.37□□□□□ -1.87
PIK3C3-202ENST00000398870 UTRNP46939 3433 aa3.37□□□□□ -1.87
PIK3C3-202ENST00000398870 MXRA5Q9NR99 2828 aa3.36□□□□□ -1.87
PIK3C3-202ENST00000398870 HTTP42858 3142 aa3.36□□□□□ -1.87
PIK3C3-202ENST00000398870 INE1O15225 51 aa3.36□□□□□ -1.87
PIK3C3-202ENST00000398870 ZANQ9Y493 2812 aa3.36□□□□□ -1.87
PIK3C3-202ENST00000398870 PDZD2O15018 2839 aa3.35□□□□□ -1.87
PIK3C3-202ENST00000398870 NBEAQ8NFP9 2946 aa3.35□□□□□ -1.87
PIK3C3-202ENST00000398870 FRYLO94915 3013 aa3.34□□□□□ -1.87
PIK3C3-202ENST00000398870 TENM4Q6N022 2769 aa3.34□□□□□ -1.87
PIK3C3-202ENST00000398870 GOLGB1Q14789 3259 aaKnown RBP3.32□□□□□ -1.88
PIK3C3-202ENST00000398870 LAMA1P25391 3075 aa3.31□□□□□ -1.88
PIK3C3-202ENST00000398870 VWFP04275 2813 aa3.31□□□□□ -1.88
PIK3C3-202ENST00000398870 ASH1LQ9NR48 2969 aaKnown RBP3.3□□□□□ -1.88
PIK3C3-202ENST00000398870 TENM2Q9NT68 2774 aa3.3□□□□□ -1.88
PIK3C3-202ENST00000398870 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
PIK3C3-202ENST00000398870 CELSR2Q9HCU4 2923 aa3.28□□□□□ -1.88
PIK3C3-202ENST00000398870 COL12A1Q99715 3063 aa3.28□□□□□ -1.88
PIK3C3-202ENST00000398870 PRUNE2Q8WUY3 3088 aa3.26□□□□□ -1.89
PIK3C3-202ENST00000398870 VPS13AQ96RL7 3174 aa3.26□□□□□ -1.89
PIK3C3-202ENST00000398870 RANBP2P49792 3224 aaKnown RBP3.25□□□□□ -1.89
PIK3C3-202ENST00000398870 ZZEF1O43149 2961 aa3.25□□□□□ -1.89
PIK3C3-202ENST00000398870 USP34Q70CQ2 3546 aa3.25□□□□□ -1.89
PIK3C3-202ENST00000398870 KRTAP12-1P59990 96 aa3.24□□□□□ -1.89
PIK3C3-202ENST00000398870 PKD1L1Q8TDX9 2849 aa3.23□□□□□ -1.89
PIK3C3-202ENST00000398870 NBPF19A0A087WUL8 3843 aa3.21□□□□□ -1.9
PIK3C3-202ENST00000398870 REV3LO60673 3130 aa3.2□□□□□ -1.9
PIK3C3-202ENST00000398870 XIRP2A4UGR9 3374 aa3.2□□□□□ -1.9
PIK3C3-202ENST00000398870 SRRM2Q9UQ35 2752 aaKnown RBP3.2□□□□□ -1.9
PIK3C3-202ENST00000398870 DCHS2Q6V1P9 2916 aa3.18□□□□□ -1.9
PIK3C3-202ENST00000398870 CELSR1Q9NYQ6 3014 aa3.18□□□□□ -1.9
PIK3C3-202ENST00000398870 DMXL2Q8TDJ6 3036 aa3.18□□□□□ -1.9
PIK3C3-202ENST00000398870 FBN2P35556 2912 aa3.13□□□□□ -1.91
PIK3C3-202ENST00000398870 SPTBN5Q9NRC6 3674 aaKnown RBP3.12□□□□□ -1.91
PIK3C3-202ENST00000398870 KRTAP10-5P60370 271 aa3.12□□□□□ -1.91
PIK3C3-202ENST00000398870 KRTAP8-1Q8IUC2 63 aa3.12□□□□□ -1.91
PIK3C3-202ENST00000398870 BOD1L1Q8NFC6 3051 aa3.11□□□□□ -1.91
PIK3C3-202ENST00000398870 MEGF8Q7Z7M0 2845 aa3.11□□□□□ -1.91
PIK3C3-202ENST00000398870 KRTAP12-3P60328 96 aa3.1□□□□□ -1.91
PIK3C3-202ENST00000398870 ADGRG4Q8IZF6 3080 aa3.1□□□□□ -1.91
PIK3C3-202ENST00000398870 COL7A1Q02388 2944 aa3.1□□□□□ -1.91
PIK3C3-202ENST00000398870 UNC80Q8N2C7 3258 aa3.09□□□□□ -1.91
PIK3C3-202ENST00000398870 ATMQ13315 3056 aa3.09□□□□□ -1.92
PIK3C3-202ENST00000398870 DNAH14Q0VDD8 3507 aa3.09□□□□□ -1.92
PIK3C3-202ENST00000398870 FREM2Q5SZK8 3169 aa3.08□□□□□ -1.92
PIK3C3-202ENST00000398870 LORP23490 312 aaPredicted RBP3.05□□□□□ -1.92
PIK3C3-202ENST00000398870 ZFHX4Q86UP3 3567 aa3.05□□□□□ -1.92
PIK3C3-202ENST00000398870 COL6A3P12111 3177 aa3.05□□□□□ -1.92
PIK3C3-202ENST00000398870 CELSR3Q9NYQ7 3312 aa3.04□□□□□ -1.92
PIK3C3-202ENST00000398870 MKI67P46013 3256 aaKnown RBP3.03□□□□□ -1.92
PIK3C3-202ENST00000398870 LAMA3Q16787 3333 aa3.03□□□□□ -1.92
PIK3C3-202ENST00000398870 AKAP9Q99996 3911 aa3.02□□□□□ -1.93
PIK3C3-202ENST00000398870 SPENQ96T58 3664 aaKnown RBP3□□□□□ -1.93
PIK3C3-202ENST00000398870 VCANP13611 3396 aa3□□□□□ -1.93
PIK3C3-202ENST00000398870 DMXL1Q9Y485 3027 aa3□□□□□ -1.93
PIK3C3-202ENST00000398870 FBN3Q75N90 2809 aa2.99□□□□□ -1.93
PIK3C3-202ENST00000398870 KRTAP23-1A1A580 65 aa2.99□□□□□ -1.93
PIK3C3-202ENST00000398870 KRTAP10-7P60409 375 aaPredicted RBP2.98□□□□□ -1.93
PIK3C3-202ENST00000398870 CFAP47Q6ZTR5 3102 aa2.97□□□□□ -1.93
PIK3C3-202ENST00000398870 BRCA2P51587 3418 aa2.96□□□□□ -1.94
PIK3C3-202ENST00000398870 LCE3AQ5TA76 89 aa2.95□□□□□ -1.94
PIK3C3-202ENST00000398870 DMDP11532 3685 aa2.95□□□□□ -1.94
PIK3C3-202ENST00000398870 SPEGQ15772 3267 aa2.95□□□□□ -1.94
PIK3C3-202ENST00000398870 ZFHX3Q15911 3703 aa2.95□□□□□ -1.94
PIK3C3-202ENST00000398870 SZT2Q5T011 3432 aa2.95□□□□□ -1.94
PIK3C3-202ENST00000398870 CDH23Q9H251 3354 aa2.94□□□□□ -1.94
PIK3C3-202ENST00000398870 ALMS1Q8TCU4 4167 aa2.93□□□□□ -1.94
PIK3C3-202ENST00000398870 KRTAP3-1Q9BYR8 98 aa2.93□□□□□ -1.94
PIK3C3-202ENST00000398870 BSNQ9UPA5 3926 aa2.92□□□□□ -1.94
PIK3C3-202ENST00000398870 FBN1P35555 2871 aaKnown RBP2.86□□□□□ -1.95
PIK3C3-202ENST00000398870 SPRR2FQ96RM1 72 aa2.86□□□□□ -1.95
PIK3C3-202ENST00000398870 LAMA5O15230 3695 aa2.84□□□□□ -1.95
PIK3C3-202ENST00000398870 CMYA5Q8N3K9 4069 aa2.84□□□□□ -1.96
PIK3C3-202ENST00000398870 TRRAPQ9Y4A5 3859 aa2.83□□□□□ -1.96
PIK3C3-202ENST00000398870 SMG1Q96Q15 3661 aaKnown RBP2.82□□□□□ -1.96
PIK3C3-202ENST00000398870 OTOGQ6ZRI0 2925 aa2.82□□□□□ -1.96
PIK3C3-202ENST00000398870 WDFY3Q8IZQ1 3526 aa2.82□□□□□ -1.96
PIK3C3-202ENST00000398870 MT1HL1P0DM35 61 aa2.82□□□□□ -1.96
PIK3C3-202ENST00000398870 ASPMQ8IZT6 3477 aa2.8□□□□□ -1.96
PIK3C3-202ENST00000398870 VPS13CQ709C8 3753 aa2.8□□□□□ -1.96
PIK3C3-202ENST00000398870 MYO15AQ9UKN7 3530 aa2.8□□□□□ -1.96
PIK3C3-202ENST00000398870 EYSQ5T1H1 3165 aa2.79□□□□□ -1.96
PIK3C3-202ENST00000398870 DNAH7Q8WXX0 4024 aa2.79□□□□□ -1.96
PIK3C3-202ENST00000398870 SPRR2EP22531 72 aa2.76□□□□□ -1.97
PIK3C3-202ENST00000398870 SPRR2BP35325 72 aa2.76□□□□□ -1.97
PIK3C3-202ENST00000398870 SPRR2AP35326 72 aa2.76□□□□□ -1.97
PIK3C3-202ENST00000398870 HECTD4Q9Y4D8 3996 aa2.75□□□□□ -1.97
PIK3C3-202ENST00000398870 KRTAP3-3Q9BYR6 98 aa2.74□□□□□ -1.97
PIK3C3-202ENST00000398870 KRTAP3-2Q9BYR7 98 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms