RNA–Protein interactions for RNA: ENST00000397463.2

LYPD1-202, Transcript of LY6/PLAUR domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYPD1, Length 1,891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYPD1-202ENST00000397463 SMIM20Q8N5G0 67 aa11.94□□□□□ -0.5
LYPD1-202ENST00000397463 CASC2Q6XLA1 102 aa11.93□□□□□ -0.5
LYPD1-202ENST00000397463 FLG2Q5D862 2391 aaPredicted RBP11.93□□□□□ -0.5
LYPD1-202ENST00000397463 KRTAP29-1A8MX34 341 aaPredicted RBP11.93□□□□□ -0.5
LYPD1-202ENST00000397463 TNXBP22105 4242 aa11.92□□□□□ -0.5
LYPD1-202ENST00000397463 COX7CP15954 63 aa11.91□□□□□ -0.5
LYPD1-202ENST00000397463 KRTAP10-8P60410 259 aa11.91□□□□□ -0.5
LYPD1-202ENST00000397463 C8orf17Q9NRJ1 99 aa11.91□□□□□ -0.5
LYPD1-202ENST00000397463 TRAV7A0A075B6U4 112 aa11.91□□□□□ -0.5
LYPD1-202ENST00000397463 FAT3Q8TDW7 4589 aa11.91□□□□□ -0.5
LYPD1-202ENST00000397463 OCR1Q9BZK8 76 aa11.89□□□□□ -0.51
LYPD1-202ENST00000397463 hDV103S1A0JD37 113 aa11.89□□□□□ -0.51
LYPD1-202ENST00000397463 CCDC179H3BU77 68 aa11.89□□□□□ -0.51
LYPD1-202ENST00000397463 UQCRQO14949 82 aa11.88□□□□□ -0.51
LYPD1-202ENST00000397463 NOTCH2NLQ7Z3S9 236 aa11.87□□□□□ -0.51
LYPD1-202ENST00000397463 MYCBP2O75592 4640 aa11.86□□□□□ -0.51
LYPD1-202ENST00000397463 C8orf87E5RJ46 101 aa11.82□□□□□ -0.52
LYPD1-202ENST00000397463 LINC00313P59037 77 aa11.79□□□□□ -0.52
LYPD1-202ENST00000397463 KRTAP4-5Q9BYR2 181 aa11.79□□□□□ -0.52
LYPD1-202ENST00000397463 TMEM254Q8TBM7 123 aa11.78□□□□□ -0.52
LYPD1-202ENST00000397463 MRPL34Q9BQ48 92 aaKnown RBP11.78□□□□□ -0.52
LYPD1-202ENST00000397463 BIRC6Q9NR09 4857 aa11.77□□□□□ -0.52
LYPD1-202ENST00000397463 MT1HL1P0DM35 61 aa11.75□□□□□ -0.53
LYPD1-202ENST00000397463 RETNLBQ9BQ08 111 aa11.74□□□□□ -0.53
LYPD1-202ENST00000397463 DMBT1Q9UGM3 2413 aaPredicted RBP11.73□□□□□ -0.53
LYPD1-202ENST00000397463 C20orf197Q8N268 126 aa11.73□□□□□ -0.53
LYPD1-202ENST00000397463 NDUFS5O43920 106 aa11.71□□□□□ -0.53
LYPD1-202ENST00000397463 OXTP01178 125 aa11.7□□□□□ -0.54
LYPD1-202ENST00000397463 TP53AIP1Q9HCN2 124 aa11.68□□□□□ -0.54
LYPD1-202ENST00000397463 C5orf47Q569G3 176 aa11.68□□□□□ -0.54
LYPD1-202ENST00000397463 KRTAP16-1A8MUX0 517 aa11.66□□□□□ -0.54
LYPD1-202ENST00000397463 CYSTM1Q9H1C7 97 aa11.65□□□□□ -0.54
LYPD1-202ENST00000397463 SNURFQ9Y675 71 aa11.65□□□□□ -0.54
LYPD1-202ENST00000397463 HERC2O95714 4834 aa11.65□□□□□ -0.54
LYPD1-202ENST00000397463 KLKP1Q107X0 134 aa11.64□□□□□ -0.55
LYPD1-202ENST00000397463 Q8N9P0 234 aaPredicted RBP11.62□□□□□ -0.55
LYPD1-202ENST00000397463 A0A0U1RQV1 116 aa11.61□□□□□ -0.55
LYPD1-202ENST00000397463 ABCA13Q86UQ4 5058 aa11.6□□□□□ -0.55
LYPD1-202ENST00000397463 MP68P56378 58 aa11.6□□□□□ -0.55
LYPD1-202ENST00000397463 TRAV22A0A0B4J277 110 aa11.59□□□□□ -0.55
LYPD1-202ENST00000397463 H0Y9P7 68 aa11.59□□□□□ -0.55
LYPD1-202ENST00000397463 C9orf92A6NGG3 77 aa11.57□□□□□ -0.56
LYPD1-202ENST00000397463 FP248Q71RG6 208 aaPredicted RBP11.55□□□□□ -0.56
LYPD1-202ENST00000397463 LINC00208Q96KT6 92 aa11.53□□□□□ -0.56
LYPD1-202ENST00000397463 ZCCHC13Q8WW36 166 aaKnown RBP11.53□□□□□ -0.56
LYPD1-202ENST00000397463 H3BPC8 53 aa11.52□□□□□ -0.57
LYPD1-202ENST00000397463 Q5W150 140 aa11.51□□□□□ -0.57
LYPD1-202ENST00000397463 H7BZZ5 65 aa11.49□□□□□ -0.57
LYPD1-202ENST00000397463 NDUFC1O43677 76 aa11.49□□□□□ -0.57
LYPD1-202ENST00000397463 C1orf64Q8NEQ6 169 aa11.49□□□□□ -0.57
LYPD1-202ENST00000397463 IGLV7-46A0A075B6I9 117 aa11.47□□□□□ -0.57
LYPD1-202ENST00000397463 KRTAP13-3Q3SY46 172 aa11.47□□□□□ -0.57
LYPD1-202ENST00000397463 C20orf166-AS1Q96NR2 134 aa11.44□□□□□ -0.58
LYPD1-202ENST00000397463 TMEM258P61165 79 aa11.42□□□□□ -0.58
LYPD1-202ENST00000397463 A8MUU9 505 aa11.42□□□□□ -0.58
LYPD1-202ENST00000397463 J3QL48 77 aa11.42□□□□□ -0.58
LYPD1-202ENST00000397463 PRR4Q16378 134 aa11.4□□□□□ -0.58
LYPD1-202ENST00000397463 LOC101927531A0A1B0GV80 90 aa11.36□□□□□ -0.59
LYPD1-202ENST00000397463 Q75L30 129 aa11.33□□□□□ -0.6
LYPD1-202ENST00000397463 FAM236DA0A1B0GTK5 79 aa11.31□□□□□ -0.6
LYPD1-202ENST00000397463 FAM236CP0DP71 79 aa11.31□□□□□ -0.6
LYPD1-202ENST00000397463 PCOTHQ58A44 107 aa11.29□□□□□ -0.6
LYPD1-202ENST00000397463 CYP4F30PQ9H0H9 118 aa11.29□□□□□ -0.6
LYPD1-202ENST00000397463 IGKV2-30P06310 120 aa11.28□□□□□ -0.6
LYPD1-202ENST00000397463 XP32Q5T750 250 aa11.28□□□□□ -0.6
LYPD1-202ENST00000397463 TPRXLQ17RH7 258 aa11.25□□□□□ -0.61
LYPD1-202ENST00000397463 IGKV2D-30A0A075B6S6 120 aa11.23□□□□□ -0.61
LYPD1-202ENST00000397463 ATP5EP56381 51 aaPredicted RBP11.23□□□□□ -0.61
LYPD1-202ENST00000397463 RPL37P61927 97 aaKnown RBP11.22□□□□□ -0.61
LYPD1-202ENST00000397463 SPANXA2-OT1Q8N9U9 137 aa11.21□□□□□ -0.62
LYPD1-202ENST00000397463 ATP11AUNQ6ZP68 121 aa11.19□□□□□ -0.62
LYPD1-202ENST00000397463 PCLOQ9Y6V0 5065 aa11.17□□□□□ -0.62
LYPD1-202ENST00000397463 C7orf65Q6ZTY9 151 aa11.17□□□□□ -0.62
LYPD1-202ENST00000397463 LPAP08519 4548 aa11.14□□□□□ -0.63
LYPD1-202ENST00000397463 HRES1P13985 223 aa11.12□□□□□ -0.63
LYPD1-202ENST00000397463 LRP2P98164 4655 aa11.08□□□□□ -0.63
LYPD1-202ENST00000397463 SPINK7P58062 85 aa11.07□□□□□ -0.64
LYPD1-202ENST00000397463 SERP1Q9Y6X1 66 aa11.06□□□□□ -0.64
LYPD1-202ENST00000397463 RPS28P62857 69 aaKnown RBP11.04□□□□□ -0.64
LYPD1-202ENST00000397463 HERC1Q15751 4861 aa10.98□□□□□ -0.65
LYPD1-202ENST00000397463 DMAC1Q96GE9 116 aa10.95□□□□□ -0.66
LYPD1-202ENST00000397463 C4orf26Q17RF5 130 aa10.94□□□□□ -0.66
LYPD1-202ENST00000397463 ACYP2P14621 99 aa10.89□□□□□ -0.67
LYPD1-202ENST00000397463 COA5Q86WW8 74 aa10.89□□□□□ -0.67
LYPD1-202ENST00000397463 SEC61BP60468 96 aaKnown RBP10.86□□□□□ -0.67
LYPD1-202ENST00000397463 HMCN2Q8NDA2 5059 aa10.82□□□□□ -0.68
LYPD1-202ENST00000397463 A8MUN3 132 aa10.82□□□□□ -0.68
LYPD1-202ENST00000397463 COX6B2Q6YFQ2 88 aa10.78□□□□□ -0.68
LYPD1-202ENST00000397463 SMIM26A0A096LP01 95 aa10.78□□□□□ -0.68
LYPD1-202ENST00000397463 KRTAP3-1Q9BYR8 98 aa10.78□□□□□ -0.68
LYPD1-202ENST00000397463 CHKB-CPT1BH3BT56 60 aa10.72□□□□□ -0.69
LYPD1-202ENST00000397463 MUC17Q685J3 4493 aa10.71□□□□□ -0.69
LYPD1-202ENST00000397463 MPLKIPQ8TAP9 179 aa10.66□□□□□ -0.7
LYPD1-202ENST00000397463 KRTAP4-1Q9BYQ7 146 aa10.64□□□□□ -0.71
LYPD1-202ENST00000397463 RBM12B-AS1Q9P1G2 102 aa10.61□□□□□ -0.71
LYPD1-202ENST00000397463 Q1T7F1 81 aa10.57□□□□□ -0.72
LYPD1-202ENST00000397463 H1FX-AS1Q4G0G2 97 aa10.52□□□□□ -0.73
LYPD1-202ENST00000397463 V9GYY9 64 aa10.52□□□□□ -0.73
LYPD1-202ENST00000397463 SPTSSBQ8NFR3 76 aa10.48□□□□□ -0.73
LYPD1-202ENST00000397463 MUC2Q02817 5179 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms