RNA–Protein interactions for RNA: ENST00000396208.3

CCP110-202, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCP110, Length 5,151 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-202ENST00000396208 ZFHX3Q15911 3703 aa4.02□□□□□ -1.77
CCP110-202ENST00000396208 PRO0628Q9UI54 55 aa4.02□□□□□ -1.77
CCP110-202ENST00000396208 TENM1Q9UKZ4 2725 aa4.01□□□□□ -1.77
CCP110-202ENST00000396208 MXRA5Q9NR99 2828 aa4.01□□□□□ -1.77
CCP110-202ENST00000396208 KALRNO60229 2985 aa3.98□□□□□ -1.77
CCP110-202ENST00000396208 LAMA1P25391 3075 aa3.98□□□□□ -1.77
CCP110-202ENST00000396208 NF1P21359 2839 aa3.97□□□□□ -1.77
CCP110-202ENST00000396208 TNP1P09430 55 aa3.96□□□□□ -1.78
CCP110-202ENST00000396208 ZZEF1O43149 2961 aa3.96□□□□□ -1.78
CCP110-202ENST00000396208 UNC80Q8N2C7 3258 aa3.94□□□□□ -1.78
CCP110-202ENST00000396208 BRCA2P51587 3418 aa3.92□□□□□ -1.78
CCP110-202ENST00000396208 ROMO1P60602 79 aa3.91□□□□□ -1.78
CCP110-202ENST00000396208 PDZD2O15018 2839 aa3.91□□□□□ -1.78
CCP110-202ENST00000396208 LAMA2P24043 3122 aaKnown RBP3.91□□□□□ -1.78
CCP110-202ENST00000396208 DCHS2Q6V1P9 2916 aa3.91□□□□□ -1.78
CCP110-202ENST00000396208 COL6A3P12111 3177 aa3.91□□□□□ -1.78
CCP110-202ENST00000396208 VPS13AQ96RL7 3174 aa3.89□□□□□ -1.79
CCP110-202ENST00000396208 CELSR2Q9HCU4 2923 aa3.89□□□□□ -1.79
CCP110-202ENST00000396208 FBN3Q75N90 2809 aa3.87□□□□□ -1.79
CCP110-202ENST00000396208 ZANQ9Y493 2812 aa3.86□□□□□ -1.79
CCP110-202ENST00000396208 Q5VV11 94 aa3.86□□□□□ -1.79
CCP110-202ENST00000396208 SZT2Q5T011 3432 aa3.86□□□□□ -1.79
CCP110-202ENST00000396208 DMXL1Q9Y485 3027 aa3.85□□□□□ -1.79
CCP110-202ENST00000396208 FBN2P35556 2912 aa3.83□□□□□ -1.8
CCP110-202ENST00000396208 XIRP2A4UGR9 3374 aa3.83□□□□□ -1.8
CCP110-202ENST00000396208 OTOGQ6ZRI0 2925 aa3.82□□□□□ -1.8
CCP110-202ENST00000396208 SPATA8Q6RVD6 105 aa3.82□□□□□ -1.8
CCP110-202ENST00000396208 KTN1-AS1Q86SY8 53 aa3.8□□□□□ -1.8
CCP110-202ENST00000396208 PP632Q6XCG6 107 aa3.79□□□□□ -1.8
CCP110-202ENST00000396208 ADGRG4Q8IZF6 3080 aa3.79□□□□□ -1.8
CCP110-202ENST00000396208 HRNRQ86YZ3 2850 aaPredicted RBP3.79□□□□□ -1.8
CCP110-202ENST00000396208 CDH23Q9H251 3354 aa3.79□□□□□ -1.8
CCP110-202ENST00000396208 PKD1L1Q8TDX9 2849 aa3.78□□□□□ -1.8
CCP110-202ENST00000396208 SPTBN5Q9NRC6 3674 aaKnown RBP3.77□□□□□ -1.81
CCP110-202ENST00000396208 KRTAP16-1A8MUX0 517 aa3.77□□□□□ -1.81
CCP110-202ENST00000396208 ZFHX4Q86UP3 3567 aa3.76□□□□□ -1.81
CCP110-202ENST00000396208 MT1HL1P0DM35 61 aa3.76□□□□□ -1.81
CCP110-202ENST00000396208 BOD1L1Q8NFC6 3051 aa3.75□□□□□ -1.81
CCP110-202ENST00000396208 KRTAP25-1Q3LHN0 102 aa3.72□□□□□ -1.81
CCP110-202ENST00000396208 A6NN06 94 aa3.71□□□□□ -1.82
CCP110-202ENST00000396208 H0YAA0 97 aa3.7□□□□□ -1.82
CCP110-202ENST00000396208 CELSR1Q9NYQ6 3014 aa3.69□□□□□ -1.82
CCP110-202ENST00000396208 DNAH14Q0VDD8 3507 aa3.69□□□□□ -1.82
CCP110-202ENST00000396208 A0A0A0MQY5 61 aa3.69□□□□□ -1.82
CCP110-202ENST00000396208 TGP01266 2768 aa3.68□□□□□ -1.82
CCP110-202ENST00000396208 RELNP78509 3460 aa3.68□□□□□ -1.82
CCP110-202ENST00000396208 KRTAP4-5Q9BYR2 181 aa3.66□□□□□ -1.82
CCP110-202ENST00000396208 FREM2Q5SZK8 3169 aa3.66□□□□□ -1.82
CCP110-202ENST00000396208 VCANP13611 3396 aa3.64□□□□□ -1.83
CCP110-202ENST00000396208 VWFP04275 2813 aa3.64□□□□□ -1.83
CCP110-202ENST00000396208 A8MU10 97 aa3.64□□□□□ -1.83
CCP110-202ENST00000396208 CFAP47Q6ZTR5 3102 aa3.62□□□□□ -1.83
CCP110-202ENST00000396208 FBN1P35555 2871 aaKnown RBP3.61□□□□□ -1.83
CCP110-202ENST00000396208 KRTAP10-4P60372 401 aaPredicted RBP3.6□□□□□ -1.83
CCP110-202ENST00000396208 ALMS1Q8TCU4 4167 aa3.58□□□□□ -1.84
CCP110-202ENST00000396208 ANK3Q12955 4377 aaKnown RBP3.55□□□□□ -1.84
CCP110-202ENST00000396208 CELSR3Q9NYQ7 3312 aa3.54□□□□□ -1.84
CCP110-202ENST00000396208 SPENQ96T58 3664 aaKnown RBP3.54□□□□□ -1.84
CCP110-202ENST00000396208 P0C880 135 aa3.53□□□□□ -1.84
CCP110-202ENST00000396208 CYSTM1Q9H1C7 97 aa3.52□□□□□ -1.85
CCP110-202ENST00000396208 NBPF19A0A087WUL8 3843 aa3.52□□□□□ -1.85
CCP110-202ENST00000396208 DCHS1Q96JQ0 3298 aa3.5□□□□□ -1.85
CCP110-202ENST00000396208 C10orf95Q9H7T3 257 aa3.49□□□□□ -1.85
CCP110-202ENST00000396208 PRAC1Q96KF2 57 aa3.48□□□□□ -1.85
CCP110-202ENST00000396208 WDFY3Q8IZQ1 3526 aa3.47□□□□□ -1.85
CCP110-202ENST00000396208 HUWE1Q7Z6Z7 4374 aaKnown RBP3.47□□□□□ -1.85
CCP110-202ENST00000396208 SRRM2Q9UQ35 2752 aaKnown RBP3.46□□□□□ -1.86
CCP110-202ENST00000396208 SPEGQ15772 3267 aa3.45□□□□□ -1.86
CCP110-202ENST00000396208 MYO15AQ9UKN7 3530 aa3.44□□□□□ -1.86
CCP110-202ENST00000396208 DMDP11532 3685 aa3.44□□□□□ -1.86
CCP110-202ENST00000396208 KRTAP13-4Q3LI77 160 aa3.43□□□□□ -1.86
CCP110-202ENST00000396208 LOC400499M0QZD8 3231 aa3.42□□□□□ -1.86
CCP110-202ENST00000396208 SMG1Q96Q15 3661 aaKnown RBP3.42□□□□□ -1.86
CCP110-202ENST00000396208 DNAH1Q9P2D7 4330 aa3.38□□□□□ -1.87
CCP110-202ENST00000396208 MEGF8Q7Z7M0 2845 aa3.38□□□□□ -1.87
CCP110-202ENST00000396208 BSNQ9UPA5 3926 aa3.38□□□□□ -1.87
CCP110-202ENST00000396208 MUC3AQ02505 3323 aa3.37□□□□□ -1.87
CCP110-202ENST00000396208 COL7A1Q02388 2944 aa3.36□□□□□ -1.87
CCP110-202ENST00000396208 CSMD2Q7Z408 3487 aa3.36□□□□□ -1.87
CCP110-202ENST00000396208 DNAH11Q96DT5 4516 aa3.34□□□□□ -1.87
CCP110-202ENST00000396208 KRTAP10-12P60413 245 aa3.34□□□□□ -1.88
CCP110-202ENST00000396208 KRTAP3-1Q9BYR8 98 aa3.33□□□□□ -1.88
CCP110-202ENST00000396208 KRTAP8-1Q8IUC2 63 aa3.32□□□□□ -1.88
CCP110-202ENST00000396208 KRTAP15-1Q3LI76 137 aa3.32□□□□□ -1.88
CCP110-202ENST00000396208 KRTAP10-6P60371 365 aaPredicted RBP3.31□□□□□ -1.88
CCP110-202ENST00000396208 KRTAP12-1P59990 96 aa3.3□□□□□ -1.88
CCP110-202ENST00000396208 MT1HP80294 61 aa3.29□□□□□ -1.88
CCP110-202ENST00000396208 DNAH10Q8IVF4 4471 aa3.28□□□□□ -1.88
CCP110-202ENST00000396208 KRTAP12-2P59991 146 aa3.27□□□□□ -1.89
CCP110-202ENST00000396208 LORP23490 312 aaPredicted RBP3.26□□□□□ -1.89
CCP110-202ENST00000396208 DNHD1Q96M86 4753 aa3.24□□□□□ -1.89
CCP110-202ENST00000396208 DNAH9Q9NYC9 4486 aa3.24□□□□□ -1.89
CCP110-202ENST00000396208 ASPMQ8IZT6 3477 aa3.21□□□□□ -1.89
CCP110-202ENST00000396208 PLECQ15149 4684 aaKnown RBP3.2□□□□□ -1.9
CCP110-202ENST00000396208 DNAH5Q8TE73 4624 aa3.2□□□□□ -1.9
CCP110-202ENST00000396208 KRTAP23-1A1A580 65 aa3.19□□□□□ -1.9
CCP110-202ENST00000396208 TRRAPQ9Y4A5 3859 aa3.19□□□□□ -1.9
CCP110-202ENST00000396208 MT2AP02795 61 aa3.17□□□□□ -1.9
CCP110-202ENST00000396208 BIRC6Q9NR09 4857 aa3.15□□□□□ -1.91
CCP110-202ENST00000396208 KRTAP3-3Q9BYR6 98 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms