RNA–Protein interactions for RNA: ENST00000396175.5

TRAK1-203, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRAK1, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-203ENST00000396175 LRBAP50851 2863 aa8.06□□□□□ -1.12
TRAK1-203ENST00000396175 A8MUU9 505 aa8.04□□□□□ -1.12
TRAK1-203ENST00000396175 COL12A1Q99715 3063 aa8.04□□□□□ -1.12
TRAK1-203ENST00000396175 CDH23Q9H251 3354 aa8□□□□□ -1.13
TRAK1-203ENST00000396175 KMT2BQ9UMN6 2715 aaPredicted RBP7.99□□□□□ -1.13
TRAK1-203ENST00000396175 FRYLO94915 3013 aa7.99□□□□□ -1.13
TRAK1-203ENST00000396175 VCANP13611 3396 aa7.99□□□□□ -1.13
TRAK1-203ENST00000396175 CELSR2Q9HCU4 2923 aa7.99□□□□□ -1.13
TRAK1-203ENST00000396175 PLAC4Q8WY50 150 aa7.98□□□□□ -1.13
TRAK1-203ENST00000396175 BOD1L1Q8NFC6 3051 aa7.98□□□□□ -1.13
TRAK1-203ENST00000396175 C20orf166-AS1Q96NR2 134 aa7.94□□□□□ -1.14
TRAK1-203ENST00000396175 ZZEF1O43149 2961 aa7.93□□□□□ -1.14
TRAK1-203ENST00000396175 ZANQ9Y493 2812 aa7.89□□□□□ -1.15
TRAK1-203ENST00000396175 DNAH14Q0VDD8 3507 aa7.87□□□□□ -1.15
TRAK1-203ENST00000396175 DCHS2Q6V1P9 2916 aa7.86□□□□□ -1.15
TRAK1-203ENST00000396175 H0YAA0 97 aa7.85□□□□□ -1.15
TRAK1-203ENST00000396175 COL6A3P12111 3177 aa7.81□□□□□ -1.16
TRAK1-203ENST00000396175 SZT2Q5T011 3432 aa7.81□□□□□ -1.16
TRAK1-203ENST00000396175 CFAP47Q6ZTR5 3102 aa7.8□□□□□ -1.16
TRAK1-203ENST00000396175 USP34Q70CQ2 3546 aa7.79□□□□□ -1.16
TRAK1-203ENST00000396175 KRTAP1-4P0C5Y4 121 aa7.77□□□□□ -1.17
TRAK1-203ENST00000396175 C10orf95Q9H7T3 257 aa7.77□□□□□ -1.17
TRAK1-203ENST00000396175 TNP1P09430 55 aa7.77□□□□□ -1.17
TRAK1-203ENST00000396175 REV3LO60673 3130 aa7.76□□□□□ -1.17
TRAK1-203ENST00000396175 TENM4Q6N022 2769 aa7.76□□□□□ -1.17
TRAK1-203ENST00000396175 PP632Q6XCG6 107 aa7.73□□□□□ -1.17
TRAK1-203ENST00000396175 HRNRQ86YZ3 2850 aaPredicted RBP7.72□□□□□ -1.17
TRAK1-203ENST00000396175 TNRC18O15417 2968 aaPredicted RBP7.7□□□□□ -1.18
TRAK1-203ENST00000396175 FBN2P35556 2912 aa7.7□□□□□ -1.18
TRAK1-203ENST00000396175 P0C880 135 aa7.69□□□□□ -1.18
TRAK1-203ENST00000396175 NF1P21359 2839 aa7.69□□□□□ -1.18
TRAK1-203ENST00000396175 KRTAP13-3Q3SY46 172 aa7.64□□□□□ -1.19
TRAK1-203ENST00000396175 TENM3Q9P273 2699 aa7.63□□□□□ -1.19
TRAK1-203ENST00000396175 EYSQ5T1H1 3165 aa7.62□□□□□ -1.19
TRAK1-203ENST00000396175 XP32Q5T750 250 aa7.6□□□□□ -1.19
TRAK1-203ENST00000396175 CRYBG3Q68DQ2 2970 aa7.6□□□□□ -1.19
TRAK1-203ENST00000396175 TGP01266 2768 aa7.59□□□□□ -1.2
TRAK1-203ENST00000396175 DMXL1Q9Y485 3027 aa7.58□□□□□ -1.2
TRAK1-203ENST00000396175 SPEGQ15772 3267 aa7.49□□□□□ -1.21
TRAK1-203ENST00000396175 KRTAP10-8P60410 259 aa7.48□□□□□ -1.21
TRAK1-203ENST00000396175 TENM1Q9UKZ4 2725 aa7.48□□□□□ -1.21
TRAK1-203ENST00000396175 MXRA5Q9NR99 2828 aa7.47□□□□□ -1.21
TRAK1-203ENST00000396175 LOC400499M0QZD8 3231 aa7.44□□□□□ -1.22
TRAK1-203ENST00000396175 CELSR1Q9NYQ6 3014 aa7.41□□□□□ -1.22
TRAK1-203ENST00000396175 TPRXLQ17RH7 258 aa7.39□□□□□ -1.23
TRAK1-203ENST00000396175 PDZD2O15018 2839 aa7.34□□□□□ -1.23
TRAK1-203ENST00000396175 KRTAP21-3Q3LHN1 58 aa7.32□□□□□ -1.24
TRAK1-203ENST00000396175 KRTAP12-2P59991 146 aa7.28□□□□□ -1.24
TRAK1-203ENST00000396175 MYO15AQ9UKN7 3530 aa7.26□□□□□ -1.25
TRAK1-203ENST00000396175 SPTBN5Q9NRC6 3674 aaKnown RBP7.26□□□□□ -1.25
TRAK1-203ENST00000396175 TENM2Q9NT68 2774 aa7.25□□□□□ -1.25
TRAK1-203ENST00000396175 A0A1B0GVY2 172 aa7.25□□□□□ -1.25
TRAK1-203ENST00000396175 KRTAP12-1P59990 96 aa7.2□□□□□ -1.26
TRAK1-203ENST00000396175 KRTAP3-1Q9BYR8 98 aa7.19□□□□□ -1.26
TRAK1-203ENST00000396175 PKD1L1Q8TDX9 2849 aa7.17□□□□□ -1.26
TRAK1-203ENST00000396175 KRTAP13-4Q3LI77 160 aa7.14□□□□□ -1.27
TRAK1-203ENST00000396175 WDFY3Q8IZQ1 3526 aa7.12□□□□□ -1.27
TRAK1-203ENST00000396175 KRTAP10-10P60014 251 aa7.09□□□□□ -1.27
TRAK1-203ENST00000396175 VWFP04275 2813 aa7.08□□□□□ -1.28
TRAK1-203ENST00000396175 DCHS1Q96JQ0 3298 aa7.05□□□□□ -1.28
TRAK1-203ENST00000396175 PRO2289Q9P1D8 64 aa7.05□□□□□ -1.28
TRAK1-203ENST00000396175 KRTAP10-6P60371 365 aaPredicted RBP7.04□□□□□ -1.28
TRAK1-203ENST00000396175 RELNP78509 3460 aa7.02□□□□□ -1.29
TRAK1-203ENST00000396175 FBN1P35555 2871 aaKnown RBP6.96□□□□□ -1.3
TRAK1-203ENST00000396175 FBN3Q75N90 2809 aa6.93□□□□□ -1.3
TRAK1-203ENST00000396175 KRTAP15-1Q3LI76 137 aa6.87□□□□□ -1.31
TRAK1-203ENST00000396175 MEGF8Q7Z7M0 2845 aa6.85□□□□□ -1.31
TRAK1-203ENST00000396175 SRRM2Q9UQ35 2752 aaKnown RBP6.85□□□□□ -1.31
TRAK1-203ENST00000396175 SPENQ96T58 3664 aaKnown RBP6.85□□□□□ -1.31
TRAK1-203ENST00000396175 CSMD1Q96PZ7 3565 aa6.82□□□□□ -1.32
TRAK1-203ENST00000396175 ZFHX4Q86UP3 3567 aa6.81□□□□□ -1.32
TRAK1-203ENST00000396175 DMDP11532 3685 aa6.79□□□□□ -1.32
TRAK1-203ENST00000396175 KRTAP3-2Q9BYR7 98 aa6.78□□□□□ -1.32
TRAK1-203ENST00000396175 KRTAP3-3Q9BYR6 98 aa6.73□□□□□ -1.33
TRAK1-203ENST00000396175 OTOGQ6ZRI0 2925 aa6.73□□□□□ -1.33
TRAK1-203ENST00000396175 COL7A1Q02388 2944 aa6.69□□□□□ -1.34
TRAK1-203ENST00000396175 LAMA5O15230 3695 aa6.68□□□□□ -1.34
TRAK1-203ENST00000396175 ASPMQ8IZT6 3477 aa6.68□□□□□ -1.34
TRAK1-203ENST00000396175 SMG1Q96Q15 3661 aaKnown RBP6.65□□□□□ -1.34
TRAK1-203ENST00000396175 INE1O15225 51 aa6.64□□□□□ -1.35
TRAK1-203ENST00000396175 MUC3AQ02505 3323 aa6.55□□□□□ -1.36
TRAK1-203ENST00000396175 NBPF19A0A087WUL8 3843 aa6.52□□□□□ -1.37
TRAK1-203ENST00000396175 SVEP1Q4LDE5 3571 aa6.51□□□□□ -1.37
TRAK1-203ENST00000396175 ANK3Q12955 4377 aaKnown RBP6.5□□□□□ -1.37
TRAK1-203ENST00000396175 MT1HL1P0DM35 61 aa6.5□□□□□ -1.37
TRAK1-203ENST00000396175 CUBNO60494 3623 aa6.49□□□□□ -1.37
TRAK1-203ENST00000396175 ZFHX3Q15911 3703 aa6.44□□□□□ -1.38
TRAK1-203ENST00000396175 KRTAP23-1A1A580 65 aa6.44□□□□□ -1.38
TRAK1-203ENST00000396175 KRTAP10-4P60372 401 aaPredicted RBP6.42□□□□□ -1.38
TRAK1-203ENST00000396175 TRRAPQ9Y4A5 3859 aa6.4□□□□□ -1.38
TRAK1-203ENST00000396175 KRTAP10-12P60413 245 aa6.35□□□□□ -1.39
TRAK1-203ENST00000396175 CSMD2Q7Z408 3487 aa6.33□□□□□ -1.4
TRAK1-203ENST00000396175 KRTAP12-3P60328 96 aa6.27□□□□□ -1.41
TRAK1-203ENST00000396175 BSNQ9UPA5 3926 aa6.26□□□□□ -1.41
TRAK1-203ENST00000396175 LORP23490 312 aaPredicted RBP6.22□□□□□ -1.41
TRAK1-203ENST00000396175 LCE3AQ5TA76 89 aa6.2□□□□□ -1.42
TRAK1-203ENST00000396175 HUWE1Q7Z6Z7 4374 aaKnown RBP6.18□□□□□ -1.42
TRAK1-203ENST00000396175 VPS13CQ709C8 3753 aa6.04□□□□□ -1.44
TRAK1-203ENST00000396175 KRTAP4-5Q9BYR2 181 aa6.03□□□□□ -1.44
TRAK1-203ENST00000396175 CRCT1Q9UGL9 99 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms