RNA–Protein interactions for RNA: ENST00000393801.7

PPP6R3-204, Transcript of protein phosphatase 6 regulatory subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PPP6R3, Length 5,069 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R3-204ENST00000393801 NIPBLQ6KC79 2804 aaeCLIP6.62□□□□□ -1.35
PPP6R3-204ENST00000393801 M0QZ58 72 aa6.59□□□□□ -1.35
PPP6R3-204ENST00000393801 RPL37P61927 97 aaKnown RBP6.59□□□□□ -1.35
PPP6R3-204ENST00000393801 CFAP47Q6ZTR5 3102 aa6.59□□□□□ -1.35
PPP6R3-204ENST00000393801 CRYBG3Q68DQ2 2970 aa6.59□□□□□ -1.35
PPP6R3-204ENST00000393801 KRTAP13-2Q52LG2 175 aa6.58□□□□□ -1.36
PPP6R3-204ENST00000393801 H1FX-AS1Q4G0G2 97 aa6.57□□□□□ -1.36
PPP6R3-204ENST00000393801 DCHS2Q6V1P9 2916 aa6.53□□□□□ -1.36
PPP6R3-204ENST00000393801 PLAC4Q8WY50 150 aa6.53□□□□□ -1.36
PPP6R3-204ENST00000393801 ADM2Q7Z4H4 148 aa6.53□□□□□ -1.36
PPP6R3-204ENST00000393801 SPATA8Q6RVD6 105 aa6.52□□□□□ -1.36
PPP6R3-204ENST00000393801 ZANQ9Y493 2812 aa6.52□□□□□ -1.37
PPP6R3-204ENST00000393801 ROMO1P60602 79 aa6.51□□□□□ -1.37
PPP6R3-204ENST00000393801 EYSQ5T1H1 3165 aa6.5□□□□□ -1.37
PPP6R3-204ENST00000393801 TNRC18O15417 2968 aaPredicted RBP6.41□□□□□ -1.38
PPP6R3-204ENST00000393801 SPEGQ15772 3267 aa6.4□□□□□ -1.38
PPP6R3-204ENST00000393801 A8MUU9 505 aa6.39□□□□□ -1.39
PPP6R3-204ENST00000393801 TENM3Q9P273 2699 aa6.38□□□□□ -1.39
PPP6R3-204ENST00000393801 C20orf166-AS1Q96NR2 134 aa6.37□□□□□ -1.39
PPP6R3-204ENST00000393801 DMXL1Q9Y485 3027 aa6.37□□□□□ -1.39
PPP6R3-204ENST00000393801 NF1P21359 2839 aa6.36□□□□□ -1.39
PPP6R3-204ENST00000393801 A8MU10 97 aa6.35□□□□□ -1.39
PPP6R3-204ENST00000393801 H3BS24 57 aa6.35□□□□□ -1.39
PPP6R3-204ENST00000393801 FBN2P35556 2912 aa6.35□□□□□ -1.39
PPP6R3-204ENST00000393801 A0A0A0MQY5 61 aa6.34□□□□□ -1.39
PPP6R3-204ENST00000393801 USP34Q70CQ2 3546 aa6.32□□□□□ -1.4
PPP6R3-204ENST00000393801 KRTAP1-4P0C5Y4 121 aa6.32□□□□□ -1.4
PPP6R3-204ENST00000393801 LOC400499M0QZD8 3231 aa6.28□□□□□ -1.4
PPP6R3-204ENST00000393801 SPTBN5Q9NRC6 3674 aaKnown RBP6.28□□□□□ -1.4
PPP6R3-204ENST00000393801 HRNRQ86YZ3 2850 aaPredicted RBP6.27□□□□□ -1.41
PPP6R3-204ENST00000393801 TENM1Q9UKZ4 2725 aa6.27□□□□□ -1.41
PPP6R3-204ENST00000393801 MYO15AQ9UKN7 3530 aa6.26□□□□□ -1.41
PPP6R3-204ENST00000393801 A6NN06 94 aa6.25□□□□□ -1.41
PPP6R3-204ENST00000393801 XP32Q5T750 250 aa6.24□□□□□ -1.41
PPP6R3-204ENST00000393801 TPRXLQ17RH7 258 aa6.23□□□□□ -1.41
PPP6R3-204ENST00000393801 KRTAP25-1Q3LHN0 102 aa6.21□□□□□ -1.42
PPP6R3-204ENST00000393801 PKD1L1Q8TDX9 2849 aa6.16□□□□□ -1.42
PPP6R3-204ENST00000393801 TENM2Q9NT68 2774 aa6.14□□□□□ -1.43
PPP6R3-204ENST00000393801 CELSR1Q9NYQ6 3014 aa6.14□□□□□ -1.43
PPP6R3-204ENST00000393801 TNP1P09430 55 aa6.13□□□□□ -1.43
PPP6R3-204ENST00000393801 MXRA5Q9NR99 2828 aa6.12□□□□□ -1.43
PPP6R3-204ENST00000393801 DCHS1Q96JQ0 3298 aa6.1□□□□□ -1.43
PPP6R3-204ENST00000393801 A0A1B0GVY2 172 aa6.1□□□□□ -1.43
PPP6R3-204ENST00000393801 KRTAP13-3Q3SY46 172 aa6.08□□□□□ -1.44
PPP6R3-204ENST00000393801 KRTAP16-1A8MUX0 517 aa6.06□□□□□ -1.44
PPP6R3-204ENST00000393801 VWFP04275 2813 aa6.04□□□□□ -1.44
PPP6R3-204ENST00000393801 KRTAP10-8P60410 259 aa6.03□□□□□ -1.44
PPP6R3-204ENST00000393801 RELNP78509 3460 aa6.03□□□□□ -1.44
PPP6R3-204ENST00000393801 TGP01266 2768 aa6.01□□□□□ -1.45
PPP6R3-204ENST00000393801 NDUFAF8A1L188 74 aa6.01□□□□□ -1.45
PPP6R3-204ENST00000393801 WDFY3Q8IZQ1 3526 aa5.98□□□□□ -1.45
PPP6R3-204ENST00000393801 PP632Q6XCG6 107 aa5.97□□□□□ -1.45
PPP6R3-204ENST00000393801 PDZD2O15018 2839 aa5.96□□□□□ -1.45
PPP6R3-204ENST00000393801 KRTAP10-10P60014 251 aa5.95□□□□□ -1.46
PPP6R3-204ENST00000393801 C10orf95Q9H7T3 257 aa5.93□□□□□ -1.46
PPP6R3-204ENST00000393801 H0YAA0 97 aa5.92□□□□□ -1.46
PPP6R3-204ENST00000393801 FBN1P35555 2871 aaKnown RBP5.91□□□□□ -1.46
PPP6R3-204ENST00000393801 PRO2289Q9P1D8 64 aa5.9□□□□□ -1.46
PPP6R3-204ENST00000393801 SRRM2Q9UQ35 2752 aaKnown RBP5.9□□□□□ -1.47
PPP6R3-204ENST00000393801 P0C880 135 aa5.84□□□□□ -1.47
PPP6R3-204ENST00000393801 LAMA5O15230 3695 aa5.83□□□□□ -1.48
PPP6R3-204ENST00000393801 ASPMQ8IZT6 3477 aa5.8□□□□□ -1.48
PPP6R3-204ENST00000393801 ZFHX4Q86UP3 3567 aa5.8□□□□□ -1.48
PPP6R3-204ENST00000393801 OTOGQ6ZRI0 2925 aa5.78□□□□□ -1.48
PPP6R3-204ENST00000393801 ZFHX3Q15911 3703 aa5.72□□□□□ -1.49
PPP6R3-204ENST00000393801 NBPF19A0A087WUL8 3843 aa5.71□□□□□ -1.5
PPP6R3-204ENST00000393801 CSMD1Q96PZ7 3565 aa5.65□□□□□ -1.5
PPP6R3-204ENST00000393801 FBN3Q75N90 2809 aa5.65□□□□□ -1.51
PPP6R3-204ENST00000393801 MUC3AQ02505 3323 aa5.63□□□□□ -1.51
PPP6R3-204ENST00000393801 DMDP11532 3685 aa5.58□□□□□ -1.52
PPP6R3-204ENST00000393801 KRTAP12-2P59991 146 aa5.58□□□□□ -1.52
PPP6R3-204ENST00000393801 SMG1Q96Q15 3661 aaKnown RBP5.57□□□□□ -1.52
PPP6R3-204ENST00000393801 CUBNO60494 3623 aa5.57□□□□□ -1.52
PPP6R3-204ENST00000393801 COL7A1Q02388 2944 aa5.56□□□□□ -1.52
PPP6R3-204ENST00000393801 MEGF8Q7Z7M0 2845 aa5.55□□□□□ -1.52
PPP6R3-204ENST00000393801 MT1HL1P0DM35 61 aa5.53□□□□□ -1.52
PPP6R3-204ENST00000393801 KRTAP3-1Q9BYR8 98 aa5.53□□□□□ -1.52
PPP6R3-204ENST00000393801 CSMD2Q7Z408 3487 aa5.52□□□□□ -1.53
PPP6R3-204ENST00000393801 SVEP1Q4LDE5 3571 aa5.52□□□□□ -1.53
PPP6R3-204ENST00000393801 ANK3Q12955 4377 aaKnown RBP5.51□□□□□ -1.53
PPP6R3-204ENST00000393801 KRTAP13-4Q3LI77 160 aa5.51□□□□□ -1.53
PPP6R3-204ENST00000393801 KRTAP12-1P59990 96 aa5.48□□□□□ -1.53
PPP6R3-204ENST00000393801 TRRAPQ9Y4A5 3859 aa5.42□□□□□ -1.54
PPP6R3-204ENST00000393801 KRTAP10-4P60372 401 aaPredicted RBP5.4□□□□□ -1.55
PPP6R3-204ENST00000393801 KRTAP10-6P60371 365 aaPredicted RBP5.36□□□□□ -1.55
PPP6R3-204ENST00000393801 SPENQ96T58 3664 aaKnown RBP5.33□□□□□ -1.56
PPP6R3-204ENST00000393801 KRTAP4-5Q9BYR2 181 aa5.31□□□□□ -1.56
PPP6R3-204ENST00000393801 KRTAP15-1Q3LI76 137 aa5.23□□□□□ -1.57
PPP6R3-204ENST00000393801 KRTAP3-3Q9BYR6 98 aa5.19□□□□□ -1.58
PPP6R3-204ENST00000393801 ALMS1Q8TCU4 4167 aa5.18□□□□□ -1.58
PPP6R3-204ENST00000393801 HUWE1Q7Z6Z7 4374 aaKnown RBP5.18□□□□□ -1.58
PPP6R3-204ENST00000393801 KRTAP3-2Q9BYR7 98 aa5.17□□□□□ -1.58
PPP6R3-204ENST00000393801 KRTAP10-12P60413 245 aa5.12□□□□□ -1.59
PPP6R3-204ENST00000393801 BSNQ9UPA5 3926 aa5.08□□□□□ -1.6
PPP6R3-204ENST00000393801 VPS13CQ709C8 3753 aa5.03□□□□□ -1.6
PPP6R3-204ENST00000393801 CSMD3Q7Z407 3707 aa4.99□□□□□ -1.61
PPP6R3-204ENST00000393801 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
PPP6R3-204ENST00000393801 DNAH9Q9NYC9 4486 aa4.96□□□□□ -1.61
PPP6R3-204ENST00000393801 KRTAP12-3P60328 96 aa4.94□□□□□ -1.62
PPP6R3-204ENST00000393801 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms