RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 NIPBLQ6KC79 2804 aaeCLIP7.58□□□□□ -1.2
LCA5-202ENST00000392959 KRTAP7-1Q8IUC3 87 aa7.58□□□□□ -1.2
LCA5-202ENST00000392959 M0QZ58 72 aa7.57□□□□□ -1.2
LCA5-202ENST00000392959 FRYLO94915 3013 aa7.55□□□□□ -1.2
LCA5-202ENST00000392959 LAMA1P25391 3075 aa7.54□□□□□ -1.2
LCA5-202ENST00000392959 KMT2BQ9UMN6 2715 aaPredicted RBP7.54□□□□□ -1.2
LCA5-202ENST00000392959 CELSR2Q9HCU4 2923 aa7.53□□□□□ -1.2
LCA5-202ENST00000392959 A6NN06 94 aa7.52□□□□□ -1.21
LCA5-202ENST00000392959 BOD1L1Q8NFC6 3051 aa7.52□□□□□ -1.21
LCA5-202ENST00000392959 Q6ZRN7 208 aaPredicted RBP7.5□□□□□ -1.21
LCA5-202ENST00000392959 ADM2Q7Z4H4 148 aa7.5□□□□□ -1.21
LCA5-202ENST00000392959 KRTAP13-1Q8IUC0 172 aa7.46□□□□□ -1.22
LCA5-202ENST00000392959 LRBAP50851 2863 aa7.46□□□□□ -1.22
LCA5-202ENST00000392959 ZZEF1O43149 2961 aa7.46□□□□□ -1.22
LCA5-202ENST00000392959 TENM4Q6N022 2769 aa7.46□□□□□ -1.22
LCA5-202ENST00000392959 MUC3AQ02505 3323 aa7.44□□□□□ -1.22
LCA5-202ENST00000392959 RPS29P62273 56 aaKnown RBP7.43□□□□□ -1.22
LCA5-202ENST00000392959 A8MU10 97 aa7.42□□□□□ -1.22
LCA5-202ENST00000392959 KRTAP13-2Q52LG2 175 aa7.41□□□□□ -1.22
LCA5-202ENST00000392959 KRTAP25-1Q3LHN0 102 aa7.4□□□□□ -1.22
LCA5-202ENST00000392959 DCHS2Q6V1P9 2916 aa7.39□□□□□ -1.23
LCA5-202ENST00000392959 ZANQ9Y493 2812 aa7.38□□□□□ -1.23
LCA5-202ENST00000392959 CFAP47Q6ZTR5 3102 aa7.36□□□□□ -1.23
LCA5-202ENST00000392959 COL6A3P12111 3177 aa7.33□□□□□ -1.24
LCA5-202ENST00000392959 TENM3Q9P273 2699 aa7.31□□□□□ -1.24
LCA5-202ENST00000392959 PLAC4Q8WY50 150 aa7.31□□□□□ -1.24
LCA5-202ENST00000392959 ZFHX4Q86UP3 3567 aa7.3□□□□□ -1.24
LCA5-202ENST00000392959 CRYBG3Q68DQ2 2970 aa7.29□□□□□ -1.24
LCA5-202ENST00000392959 A8MUU9 505 aa7.29□□□□□ -1.24
LCA5-202ENST00000392959 ASPMQ8IZT6 3477 aa7.26□□□□□ -1.25
LCA5-202ENST00000392959 KRTAP16-1A8MUX0 517 aa7.26□□□□□ -1.25
LCA5-202ENST00000392959 ZFHX3Q15911 3703 aa7.24□□□□□ -1.25
LCA5-202ENST00000392959 NF1P21359 2839 aa7.22□□□□□ -1.25
LCA5-202ENST00000392959 SMG1Q96Q15 3661 aaKnown RBP7.2□□□□□ -1.26
LCA5-202ENST00000392959 FBN2P35556 2912 aa7.19□□□□□ -1.26
LCA5-202ENST00000392959 NDUFAF8A1L188 74 aa7.19□□□□□ -1.26
LCA5-202ENST00000392959 BSNQ9UPA5 3926 aa7.17□□□□□ -1.26
LCA5-202ENST00000392959 C20orf166-AS1Q96NR2 134 aa7.16□□□□□ -1.26
LCA5-202ENST00000392959 TENM1Q9UKZ4 2725 aa7.13□□□□□ -1.27
LCA5-202ENST00000392959 TNRC18O15417 2968 aaPredicted RBP7.13□□□□□ -1.27
LCA5-202ENST00000392959 RELNP78509 3460 aa7.13□□□□□ -1.27
LCA5-202ENST00000392959 HRNRQ86YZ3 2850 aaPredicted RBP7.08□□□□□ -1.28
LCA5-202ENST00000392959 KRTAP1-4P0C5Y4 121 aa7.05□□□□□ -1.28
LCA5-202ENST00000392959 DMXL1Q9Y485 3027 aa7.04□□□□□ -1.28
LCA5-202ENST00000392959 TNP1P09430 55 aa7.04□□□□□ -1.28
LCA5-202ENST00000392959 LOC400499M0QZD8 3231 aa7.03□□□□□ -1.28
LCA5-202ENST00000392959 TGP01266 2768 aa6.98□□□□□ -1.29
LCA5-202ENST00000392959 H0YAA0 97 aa6.98□□□□□ -1.29
LCA5-202ENST00000392959 C10orf95Q9H7T3 257 aa6.96□□□□□ -1.3
LCA5-202ENST00000392959 LAMA5O15230 3695 aa6.95□□□□□ -1.3
LCA5-202ENST00000392959 VPS13CQ709C8 3753 aa6.95□□□□□ -1.3
LCA5-202ENST00000392959 XP32Q5T750 250 aa6.94□□□□□ -1.3
LCA5-202ENST00000392959 CELSR1Q9NYQ6 3014 aa6.94□□□□□ -1.3
LCA5-202ENST00000392959 MXRA5Q9NR99 2828 aa6.92□□□□□ -1.3
LCA5-202ENST00000392959 PKD1L1Q8TDX9 2849 aa6.92□□□□□ -1.3
LCA5-202ENST00000392959 PP632Q6XCG6 107 aa6.91□□□□□ -1.3
LCA5-202ENST00000392959 DCHS1Q96JQ0 3298 aa6.9□□□□□ -1.31
LCA5-202ENST00000392959 TENM2Q9NT68 2774 aa6.89□□□□□ -1.31
LCA5-202ENST00000392959 PDZD2O15018 2839 aa6.88□□□□□ -1.31
LCA5-202ENST00000392959 KRTAP21-3Q3LHN1 58 aa6.86□□□□□ -1.31
LCA5-202ENST00000392959 NBPF19A0A087WUL8 3843 aa6.85□□□□□ -1.31
LCA5-202ENST00000392959 P0C880 135 aa6.84□□□□□ -1.31
LCA5-202ENST00000392959 AKAP9Q99996 3911 aa6.82□□□□□ -1.32
LCA5-202ENST00000392959 CSMD1Q96PZ7 3565 aa6.8□□□□□ -1.32
LCA5-202ENST00000392959 VWFP04275 2813 aa6.79□□□□□ -1.32
LCA5-202ENST00000392959 KRTAP10-8P60410 259 aa6.78□□□□□ -1.32
LCA5-202ENST00000392959 SVEP1Q4LDE5 3571 aa6.77□□□□□ -1.33
LCA5-202ENST00000392959 KRTAP13-3Q3SY46 172 aa6.76□□□□□ -1.33
LCA5-202ENST00000392959 TPRXLQ17RH7 258 aa6.76□□□□□ -1.33
LCA5-202ENST00000392959 A0A1B0GVY2 172 aa6.72□□□□□ -1.33
LCA5-202ENST00000392959 SRRM2Q9UQ35 2752 aaKnown RBP6.66□□□□□ -1.34
LCA5-202ENST00000392959 FBN1P35555 2871 aaKnown RBP6.6□□□□□ -1.35
LCA5-202ENST00000392959 KRTAP10-10P60014 251 aa6.58□□□□□ -1.36
LCA5-202ENST00000392959 CSMD2Q7Z408 3487 aa6.57□□□□□ -1.36
LCA5-202ENST00000392959 CUBNO60494 3623 aa6.52□□□□□ -1.37
LCA5-202ENST00000392959 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
LCA5-202ENST00000392959 PRO2289Q9P1D8 64 aa6.48□□□□□ -1.37
LCA5-202ENST00000392959 FBN3Q75N90 2809 aa6.48□□□□□ -1.37
LCA5-202ENST00000392959 KRTAP12-1P59990 96 aa6.43□□□□□ -1.38
LCA5-202ENST00000392959 KRTAP3-1Q9BYR8 98 aa6.43□□□□□ -1.38
LCA5-202ENST00000392959 KRTAP13-4Q3LI77 160 aa6.39□□□□□ -1.39
LCA5-202ENST00000392959 MEGF8Q7Z7M0 2845 aa6.38□□□□□ -1.39
LCA5-202ENST00000392959 COL7A1Q02388 2944 aa6.35□□□□□ -1.39
LCA5-202ENST00000392959 OTOGQ6ZRI0 2925 aa6.35□□□□□ -1.39
LCA5-202ENST00000392959 KRTAP10-6P60371 365 aaPredicted RBP6.27□□□□□ -1.41
LCA5-202ENST00000392959 ZNF469Q96JG9 3925 aaPredicted RBP6.26□□□□□ -1.41
LCA5-202ENST00000392959 ANK3Q12955 4377 aaKnown RBP6.2□□□□□ -1.42
LCA5-202ENST00000392959 CSMD3Q7Z407 3707 aa6.2□□□□□ -1.42
LCA5-202ENST00000392959 KRTAP15-1Q3LI76 137 aa6.05□□□□□ -1.44
LCA5-202ENST00000392959 KRTAP3-2Q9BYR7 98 aa6.04□□□□□ -1.44
LCA5-202ENST00000392959 TRRAPQ9Y4A5 3859 aa6.04□□□□□ -1.44
LCA5-202ENST00000392959 LYSTQ99698 3801 aa6.04□□□□□ -1.44
LCA5-202ENST00000392959 ANK2Q01484 3957 aa6.03□□□□□ -1.44
LCA5-202ENST00000392959 KRTAP3-3Q9BYR6 98 aa6.01□□□□□ -1.45
LCA5-202ENST00000392959 MT1HL1P0DM35 61 aa5.97□□□□□ -1.45
LCA5-202ENST00000392959 CMYA5Q8N3K9 4069 aa5.9□□□□□ -1.47
LCA5-202ENST00000392959 KRTAP10-4P60372 401 aaPredicted RBP5.84□□□□□ -1.47
LCA5-202ENST00000392959 DNAH1Q9P2D7 4330 aa5.83□□□□□ -1.48
LCA5-202ENST00000392959 INE1O15225 51 aa5.82□□□□□ -1.48
LCA5-202ENST00000392959 KRTAP10-12P60413 245 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms