RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 RANBP2P49792 3224 aaKnown RBP2.15□□□□□ -2.07
UBR3-202ENST00000392632 VCANP13611 3396 aa2.15□□□□□ -2.07
UBR3-202ENST00000392632 UNC80Q8N2C7 3258 aa2.15□□□□□ -2.07
UBR3-202ENST00000392632 PRUNE2Q8WUY3 3088 aa2.14□□□□□ -2.07
UBR3-202ENST00000392632 MYO15AQ9UKN7 3530 aa2.14□□□□□ -2.07
UBR3-202ENST00000392632 KRTAP11-1Q8IUC1 163 aa2.14□□□□□ -2.07
UBR3-202ENST00000392632 NDUFAF8A1L188 74 aa2.13□□□□□ -2.07
UBR3-202ENST00000392632 LCE2AQ5TA79 106 aaPredicted RBP2.13□□□□□ -2.07
UBR3-202ENST00000392632 WDFY3Q8IZQ1 3526 aa2.13□□□□□ -2.07
UBR3-202ENST00000392632 DNAH14Q0VDD8 3507 aa2.13□□□□□ -2.07
UBR3-202ENST00000392632 A0A1B0GVY2 172 aa2.12□□□□□ -2.07
UBR3-202ENST00000392632 ZFHX4Q86UP3 3567 aa2.12□□□□□ -2.07
UBR3-202ENST00000392632 DMDP11532 3685 aa2.11□□□□□ -2.07
UBR3-202ENST00000392632 ITPR1Q14643 2758 aa2.11□□□□□ -2.07
UBR3-202ENST00000392632 A6NN06 94 aa2.1□□□□□ -2.07
UBR3-202ENST00000392632 TRANK1O15050 2925 aa2.1□□□□□ -2.07
UBR3-202ENST00000392632 SPEGQ15772 3267 aa2.09□□□□□ -2.07
UBR3-202ENST00000392632 TRIOO75962 3097 aa2.09□□□□□ -2.08
UBR3-202ENST00000392632 NBEAL2Q6ZNJ1 2754 aa2.09□□□□□ -2.08
UBR3-202ENST00000392632 COL6A3P12111 3177 aa2.08□□□□□ -2.08
UBR3-202ENST00000392632 KRTAP7-1Q8IUC3 87 aa2.08□□□□□ -2.08
UBR3-202ENST00000392632 CHD7Q9P2D1 2997 aa2.08□□□□□ -2.08
UBR3-202ENST00000392632 KRTAP1-4P0C5Y4 121 aa2.08□□□□□ -2.08
UBR3-202ENST00000392632 A0A0C4DFX4 3053 aa2.08□□□□□ -2.08
UBR3-202ENST00000392632 C5orf42Q9H799 3197 aa2.08□□□□□ -2.08
UBR3-202ENST00000392632 KRTAP13-3Q3SY46 172 aa2.07□□□□□ -2.08
UBR3-202ENST00000392632 CFAP54Q96N23 3096 aa2.07□□□□□ -2.08
UBR3-202ENST00000392632 TENM2Q9NT68 2774 aa2.07□□□□□ -2.08
UBR3-202ENST00000392632 FRYLO94915 3013 aa2.07□□□□□ -2.08
UBR3-202ENST00000392632 NIPBLQ6KC79 2804 aaeCLIP2.06□□□□□ -2.08
UBR3-202ENST00000392632 VPS13AQ96RL7 3174 aa2.05□□□□□ -2.08
UBR3-202ENST00000392632 TENM1Q9UKZ4 2725 aa2.05□□□□□ -2.08
UBR3-202ENST00000392632 WDFY4Q6ZS81 3184 aa2.05□□□□□ -2.08
UBR3-202ENST00000392632 LORP23490 312 aaPredicted RBP2.04□□□□□ -2.08
UBR3-202ENST00000392632 KALRNO60229 2985 aa2.03□□□□□ -2.08
UBR3-202ENST00000392632 LAMA1P25391 3075 aa2.03□□□□□ -2.08
UBR3-202ENST00000392632 FRYQ5TBA9 3013 aa2.02□□□□□ -2.09
UBR3-202ENST00000392632 ASPMQ8IZT6 3477 aa2.01□□□□□ -2.09
UBR3-202ENST00000392632 LCE2CQ5TA81 110 aa2.01□□□□□ -2.09
UBR3-202ENST00000392632 FBN3Q75N90 2809 aa2□□□□□ -2.09
UBR3-202ENST00000392632 PDZD2O15018 2839 aa2□□□□□ -2.09
UBR3-202ENST00000392632 H0YAA0 97 aa1.99□□□□□ -2.09
UBR3-202ENST00000392632 APCP25054 2843 aa1.99□□□□□ -2.09
UBR3-202ENST00000392632 LOC400499M0QZD8 3231 aa1.98□□□□□ -2.09
UBR3-202ENST00000392632 SPENQ96T58 3664 aaKnown RBP1.98□□□□□ -2.09
UBR3-202ENST00000392632 NF1P21359 2839 aa1.98□□□□□ -2.09
UBR3-202ENST00000392632 ALMS1Q8TCU4 4167 aa1.98□□□□□ -2.09
UBR3-202ENST00000392632 KRTAP13-4Q3LI77 160 aa1.98□□□□□ -2.09
UBR3-202ENST00000392632 CFAP47Q6ZTR5 3102 aa1.97□□□□□ -2.09
UBR3-202ENST00000392632 ZFHX3Q15911 3703 aa1.97□□□□□ -2.09
UBR3-202ENST00000392632 KRTAP12-2P59991 146 aa1.96□□□□□ -2.1
UBR3-202ENST00000392632 KRTAP15-1Q3LI76 137 aa1.95□□□□□ -2.1
UBR3-202ENST00000392632 DSPP15924 2871 aaKnown RBP1.95□□□□□ -2.1
UBR3-202ENST00000392632 LAMA5O15230 3695 aa1.95□□□□□ -2.1
UBR3-202ENST00000392632 FREM2Q5SZK8 3169 aa1.95□□□□□ -2.1
UBR3-202ENST00000392632 DCHS1Q96JQ0 3298 aa1.94□□□□□ -2.1
UBR3-202ENST00000392632 CELSR3Q9NYQ7 3312 aa1.94□□□□□ -2.1
UBR3-202ENST00000392632 MGAQ8IWI9 3026 aa1.93□□□□□ -2.1
UBR3-202ENST00000392632 TACC2O95359 2948 aa1.91□□□□□ -2.1
UBR3-202ENST00000392632 DMXL1Q9Y485 3027 aa1.91□□□□□ -2.1
UBR3-202ENST00000392632 CELSR2Q9HCU4 2923 aa1.9□□□□□ -2.1
UBR3-202ENST00000392632 CRYBG3Q68DQ2 2970 aa1.9□□□□□ -2.11
UBR3-202ENST00000392632 PKD1L1Q8TDX9 2849 aa1.89□□□□□ -2.11
UBR3-202ENST00000392632 KRTAP19-4Q3LI73 84 aa1.88□□□□□ -2.11
UBR3-202ENST00000392632 TGP01266 2768 aa1.88□□□□□ -2.11
UBR3-202ENST00000392632 SRRM2Q9UQ35 2752 aaKnown RBP1.88□□□□□ -2.11
UBR3-202ENST00000392632 KRTAP12-1P59990 96 aa1.87□□□□□ -2.11
UBR3-202ENST00000392632 INE1O15225 51 aa1.86□□□□□ -2.11
UBR3-202ENST00000392632 SMG1Q96Q15 3661 aaKnown RBP1.86□□□□□ -2.11
UBR3-202ENST00000392632 BSNQ9UPA5 3926 aa1.86□□□□□ -2.11
UBR3-202ENST00000392632 DCHS2Q6V1P9 2916 aa1.86□□□□□ -2.11
UBR3-202ENST00000392632 BOD1L1Q8NFC6 3051 aa1.86□□□□□ -2.11
UBR3-202ENST00000392632 ZZEF1O43149 2961 aa1.85□□□□□ -2.11
UBR3-202ENST00000392632 KRTAP10-12P60413 245 aa1.85□□□□□ -2.11
UBR3-202ENST00000392632 HUWE1Q7Z6Z7 4374 aaKnown RBP1.84□□□□□ -2.11
UBR3-202ENST00000392632 AKAP9Q99996 3911 aa1.84□□□□□ -2.11
UBR3-202ENST00000392632 PRKDCP78527 4128 aaKnown RBP1.84□□□□□ -2.11
UBR3-202ENST00000392632 ATMQ13315 3056 aa1.84□□□□□ -2.11
UBR3-202ENST00000392632 DMXL2Q8TDJ6 3036 aa1.84□□□□□ -2.11
UBR3-202ENST00000392632 RELNP78509 3460 aa1.84□□□□□ -2.11
UBR3-202ENST00000392632 DNAH1Q9P2D7 4330 aa1.84□□□□□ -2.12
UBR3-202ENST00000392632 ASH1LQ9NR48 2969 aaKnown RBP1.83□□□□□ -2.12
UBR3-202ENST00000392632 LRBAP50851 2863 aa1.83□□□□□ -2.12
UBR3-202ENST00000392632 NBEAQ8NFP9 2946 aa1.82□□□□□ -2.12
UBR3-202ENST00000392632 CRCT1Q9UGL9 99 aa1.81□□□□□ -2.12
UBR3-202ENST00000392632 ZANQ9Y493 2812 aa1.81□□□□□ -2.12
UBR3-202ENST00000392632 VWFP04275 2813 aa1.81□□□□□ -2.12
UBR3-202ENST00000392632 PCLOQ9Y6V0 5065 aa1.81□□□□□ -2.12
UBR3-202ENST00000392632 LCE3BQ5TA77 95 aa1.81□□□□□ -2.12
UBR3-202ENST00000392632 CSMD2Q7Z408 3487 aa1.8□□□□□ -2.12
UBR3-202ENST00000392632 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.8□□□□□ -2.12
UBR3-202ENST00000392632 VPS13CQ709C8 3753 aa1.8□□□□□ -2.12
UBR3-202ENST00000392632 KRTAP23-1A1A580 65 aa1.79□□□□□ -2.12
UBR3-202ENST00000392632 VPS13DQ5THJ4 4388 aa1.79□□□□□ -2.12
UBR3-202ENST00000392632 COL12A1Q99715 3063 aa1.79□□□□□ -2.12
UBR3-202ENST00000392632 CSMD1Q96PZ7 3565 aa1.79□□□□□ -2.12
UBR3-202ENST00000392632 KRTAP12-3P60328 96 aa1.78□□□□□ -2.12
UBR3-202ENST00000392632 KRTAP4-8Q9BYQ9 185 aa1.78□□□□□ -2.12
UBR3-202ENST00000392632 DNHD1Q96M86 4753 aa1.77□□□□□ -2.13
UBR3-202ENST00000392632 MT1HL1P0DM35 61 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms