RNA–Protein interactions for RNA: ENST00000392396.7

TFRC-202, Transcript of transferrin receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TFRC, Length 5,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-202ENST00000392396 TPRXLQ17RH7 258 aa9.92□□□□□ -0.82
TFRC-202ENST00000392396 KALRNO60229 2985 aa9.92□□□□□ -0.82
TFRC-202ENST00000392396 DCHS2Q6V1P9 2916 aa9.92□□□□□ -0.82
TFRC-202ENST00000392396 TENM1Q9UKZ4 2725 aa9.91□□□□□ -0.82
TFRC-202ENST00000392396 CDH23Q9H251 3354 aa9.91□□□□□ -0.82
TFRC-202ENST00000392396 ROMO1P60602 79 aa9.87□□□□□ -0.83
TFRC-202ENST00000392396 KRTAP1-4P0C5Y4 121 aa9.87□□□□□ -0.83
TFRC-202ENST00000392396 BOD1L1Q8NFC6 3051 aa9.86□□□□□ -0.83
TFRC-202ENST00000392396 XP32Q5T750 250 aa9.85□□□□□ -0.83
TFRC-202ENST00000392396 SZT2Q5T011 3432 aa9.85□□□□□ -0.83
TFRC-202ENST00000392396 NF1P21359 2839 aa9.85□□□□□ -0.83
TFRC-202ENST00000392396 TENM2Q9NT68 2774 aa9.85□□□□□ -0.83
TFRC-202ENST00000392396 COL6A3P12111 3177 aa9.84□□□□□ -0.83
TFRC-202ENST00000392396 ADGRG4Q8IZF6 3080 aa9.84□□□□□ -0.83
TFRC-202ENST00000392396 ZANQ9Y493 2812 aa9.83□□□□□ -0.84
TFRC-202ENST00000392396 ASH1LQ9NR48 2969 aaKnown RBP9.81□□□□□ -0.84
TFRC-202ENST00000392396 SPATA8Q6RVD6 105 aa9.81□□□□□ -0.84
TFRC-202ENST00000392396 A0A1B0GVY2 172 aa9.76□□□□□ -0.85
TFRC-202ENST00000392396 Q5VV11 94 aa9.76□□□□□ -0.85
TFRC-202ENST00000392396 VCANP13611 3396 aa9.75□□□□□ -0.85
TFRC-202ENST00000392396 MXRA5Q9NR99 2828 aa9.72□□□□□ -0.85
TFRC-202ENST00000392396 FREM2Q5SZK8 3169 aa9.7□□□□□ -0.86
TFRC-202ENST00000392396 DNAH14Q0VDD8 3507 aa9.67□□□□□ -0.86
TFRC-202ENST00000392396 DMXL1Q9Y485 3027 aa9.65□□□□□ -0.86
TFRC-202ENST00000392396 CELSR3Q9NYQ7 3312 aa9.64□□□□□ -0.87
TFRC-202ENST00000392396 CYSTM1Q9H1C7 97 aa9.63□□□□□ -0.87
TFRC-202ENST00000392396 KRTAP10-10P60014 251 aa9.62□□□□□ -0.87
TFRC-202ENST00000392396 TNP1P09430 55 aa9.62□□□□□ -0.87
TFRC-202ENST00000392396 KRTAP13-3Q3SY46 172 aa9.59□□□□□ -0.87
TFRC-202ENST00000392396 KRTAP10-8P60410 259 aa9.57□□□□□ -0.88
TFRC-202ENST00000392396 PKD1L1Q8TDX9 2849 aa9.55□□□□□ -0.88
TFRC-202ENST00000392396 PRO2289Q9P1D8 64 aa9.5□□□□□ -0.89
TFRC-202ENST00000392396 SPEGQ15772 3267 aa9.5□□□□□ -0.89
TFRC-202ENST00000392396 HRNRQ86YZ3 2850 aaPredicted RBP9.5□□□□□ -0.89
TFRC-202ENST00000392396 PRAC1Q96KF2 57 aa9.49□□□□□ -0.89
TFRC-202ENST00000392396 A0A0A0MQY5 61 aa9.48□□□□□ -0.89
TFRC-202ENST00000392396 A8MU10 97 aa9.44□□□□□ -0.9
TFRC-202ENST00000392396 CFAP47Q6ZTR5 3102 aa9.41□□□□□ -0.9
TFRC-202ENST00000392396 FBN2P35556 2912 aa9.41□□□□□ -0.9
TFRC-202ENST00000392396 MYO15AQ9UKN7 3530 aa9.36□□□□□ -0.91
TFRC-202ENST00000392396 PDZD2O15018 2839 aa9.3□□□□□ -0.92
TFRC-202ENST00000392396 CELSR1Q9NYQ6 3014 aa9.3□□□□□ -0.92
TFRC-202ENST00000392396 VWFP04275 2813 aa9.26□□□□□ -0.93
TFRC-202ENST00000392396 KRTAP16-1A8MUX0 517 aa9.25□□□□□ -0.93
TFRC-202ENST00000392396 TGP01266 2768 aa9.22□□□□□ -0.93
TFRC-202ENST00000392396 PP632Q6XCG6 107 aa9.19□□□□□ -0.94
TFRC-202ENST00000392396 OTOGQ6ZRI0 2925 aa9.14□□□□□ -0.95
TFRC-202ENST00000392396 WDFY3Q8IZQ1 3526 aa9.13□□□□□ -0.95
TFRC-202ENST00000392396 SPTBN5Q9NRC6 3674 aaKnown RBP9.08□□□□□ -0.96
TFRC-202ENST00000392396 KRTAP25-1Q3LHN0 102 aa9.06□□□□□ -0.96
TFRC-202ENST00000392396 H3BS24 57 aa9.06□□□□□ -0.96
TFRC-202ENST00000392396 DCHS1Q96JQ0 3298 aa9.04□□□□□ -0.96
TFRC-202ENST00000392396 LOC400499M0QZD8 3231 aa8.99□□□□□ -0.97
TFRC-202ENST00000392396 SRRM2Q9UQ35 2752 aaKnown RBP8.98□□□□□ -0.97
TFRC-202ENST00000392396 FBN3Q75N90 2809 aa8.97□□□□□ -0.97
TFRC-202ENST00000392396 C10orf95Q9H7T3 257 aa8.97□□□□□ -0.97
TFRC-202ENST00000392396 FBN1P35555 2871 aaKnown RBP8.91□□□□□ -0.98
TFRC-202ENST00000392396 P0C880 135 aa8.91□□□□□ -0.98
TFRC-202ENST00000392396 A6NN06 94 aa8.85□□□□□ -0.99
TFRC-202ENST00000392396 MT1HL1P0DM35 61 aa8.78□□□□□ -1
TFRC-202ENST00000392396 H0YAA0 97 aa8.75□□□□□ -1.01
TFRC-202ENST00000392396 ZFHX3Q15911 3703 aa8.73□□□□□ -1.01
TFRC-202ENST00000392396 NBPF19A0A087WUL8 3843 aa8.72□□□□□ -1.01
TFRC-202ENST00000392396 RELNP78509 3460 aa8.66□□□□□ -1.02
TFRC-202ENST00000392396 ASPMQ8IZT6 3477 aa8.63□□□□□ -1.03
TFRC-202ENST00000392396 KRTAP4-5Q9BYR2 181 aa8.62□□□□□ -1.03
TFRC-202ENST00000392396 ZFHX4Q86UP3 3567 aa8.58□□□□□ -1.04
TFRC-202ENST00000392396 MUC3AQ02505 3323 aa8.5□□□□□ -1.05
TFRC-202ENST00000392396 NDUFAF8A1L188 74 aa8.5□□□□□ -1.05
TFRC-202ENST00000392396 DMDP11532 3685 aa8.49□□□□□ -1.05
TFRC-202ENST00000392396 ANK3Q12955 4377 aaKnown RBP8.49□□□□□ -1.05
TFRC-202ENST00000392396 KRTAP13-4Q3LI77 160 aa8.45□□□□□ -1.06
TFRC-202ENST00000392396 KRTAP10-4P60372 401 aaPredicted RBP8.44□□□□□ -1.06
TFRC-202ENST00000392396 SPENQ96T58 3664 aaKnown RBP8.43□□□□□ -1.06
TFRC-202ENST00000392396 COL7A1Q02388 2944 aa8.42□□□□□ -1.06
TFRC-202ENST00000392396 SMG1Q96Q15 3661 aaKnown RBP8.42□□□□□ -1.06
TFRC-202ENST00000392396 MEGF8Q7Z7M0 2845 aa8.41□□□□□ -1.06
TFRC-202ENST00000392396 LAMA5O15230 3695 aa8.41□□□□□ -1.06
TFRC-202ENST00000392396 CSMD1Q96PZ7 3565 aa8.38□□□□□ -1.07
TFRC-202ENST00000392396 KRTAP3-1Q9BYR8 98 aa8.37□□□□□ -1.07
TFRC-202ENST00000392396 KRTAP12-2P59991 146 aa8.37□□□□□ -1.07
TFRC-202ENST00000392396 KRTAP12-1P59990 96 aa8.3□□□□□ -1.08
TFRC-202ENST00000392396 CUBNO60494 3623 aa8.3□□□□□ -1.08
TFRC-202ENST00000392396 SVEP1Q4LDE5 3571 aa8.2□□□□□ -1.1
TFRC-202ENST00000392396 KRTAP15-1Q3LI76 137 aa8.19□□□□□ -1.1
TFRC-202ENST00000392396 ALMS1Q8TCU4 4167 aa8.11□□□□□ -1.11
TFRC-202ENST00000392396 KRTAP10-6P60371 365 aaPredicted RBP8.07□□□□□ -1.12
TFRC-202ENST00000392396 TRRAPQ9Y4A5 3859 aa8.06□□□□□ -1.12
TFRC-202ENST00000392396 KRTAP10-12P60413 245 aa8.05□□□□□ -1.12
TFRC-202ENST00000392396 CSMD2Q7Z408 3487 aa8.01□□□□□ -1.13
TFRC-202ENST00000392396 HUWE1Q7Z6Z7 4374 aaKnown RBP7.96□□□□□ -1.14
TFRC-202ENST00000392396 KRTAP3-3Q9BYR6 98 aa7.85□□□□□ -1.15
TFRC-202ENST00000392396 CRCT1Q9UGL9 99 aa7.8□□□□□ -1.16
TFRC-202ENST00000392396 KRTAP3-2Q9BYR7 98 aa7.79□□□□□ -1.16
TFRC-202ENST00000392396 KRTAP8-1Q8IUC2 63 aa7.78□□□□□ -1.16
TFRC-202ENST00000392396 DNHD1Q96M86 4753 aa7.74□□□□□ -1.17
TFRC-202ENST00000392396 DNAH11Q96DT5 4516 aa7.7□□□□□ -1.18
TFRC-202ENST00000392396 DNAH5Q8TE73 4624 aa7.7□□□□□ -1.18
TFRC-202ENST00000392396 KRTAP12-3P60328 96 aa7.7□□□□□ -1.18
TFRC-202ENST00000392396 PLECQ15149 4684 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms