RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 VCANP13611 3396 aa8.47□□□□□ -1.05
SHANK1-204ENST00000391814 UBR5O95071 2799 aaPredicted RBP8.44□□□□□ -1.06
SHANK1-204ENST00000391814 SPEGQ15772 3267 aa8.44□□□□□ -1.06
SHANK1-204ENST00000391814 SPTBN5Q9NRC6 3674 aaKnown RBP8.42□□□□□ -1.06
SHANK1-204ENST00000391814 ITPR2Q14571 2701 aa8.39□□□□□ -1.07
SHANK1-204ENST00000391814 WDFY3Q8IZQ1 3526 aa8.38□□□□□ -1.07
SHANK1-204ENST00000391814 XP32Q5T750 250 aa8.38□□□□□ -1.07
SHANK1-204ENST00000391814 KRTAP1-4P0C5Y4 121 aa8.37□□□□□ -1.07
SHANK1-204ENST00000391814 CFAP47Q6ZTR5 3102 aa8.37□□□□□ -1.07
SHANK1-204ENST00000391814 KRTAP10-10P60014 251 aa8.35□□□□□ -1.07
SHANK1-204ENST00000391814 CRYBG3Q68DQ2 2970 aa8.34□□□□□ -1.07
SHANK1-204ENST00000391814 KALRNO60229 2985 aa8.33□□□□□ -1.08
SHANK1-204ENST00000391814 TACC2O95359 2948 aa8.32□□□□□ -1.08
SHANK1-204ENST00000391814 KRTAP12-2P59991 146 aa8.31□□□□□ -1.08
SHANK1-204ENST00000391814 ASPMQ8IZT6 3477 aa8.31□□□□□ -1.08
SHANK1-204ENST00000391814 LAMA1P25391 3075 aa8.28□□□□□ -1.08
SHANK1-204ENST00000391814 ITPR1Q14643 2758 aa8.27□□□□□ -1.09
SHANK1-204ENST00000391814 DMXL2Q8TDJ6 3036 aa8.26□□□□□ -1.09
SHANK1-204ENST00000391814 DCHS1Q96JQ0 3298 aa8.26□□□□□ -1.09
SHANK1-204ENST00000391814 ATMQ13315 3056 aa8.25□□□□□ -1.09
SHANK1-204ENST00000391814 TPRXLQ17RH7 258 aa8.25□□□□□ -1.09
SHANK1-204ENST00000391814 KRTAP13-3Q3SY46 172 aa8.25□□□□□ -1.09
SHANK1-204ENST00000391814 NSD1Q96L73 2696 aaPredicted RBP8.24□□□□□ -1.09
SHANK1-204ENST00000391814 COL12A1Q99715 3063 aa8.21□□□□□ -1.1
SHANK1-204ENST00000391814 LRBAP50851 2863 aa8.2□□□□□ -1.1
SHANK1-204ENST00000391814 EYSQ5T1H1 3165 aa8.19□□□□□ -1.1
SHANK1-204ENST00000391814 FRYLO94915 3013 aa8.18□□□□□ -1.1
SHANK1-204ENST00000391814 BOD1L1Q8NFC6 3051 aa8.18□□□□□ -1.1
SHANK1-204ENST00000391814 UTP20O75691 2785 aaKnown RBP8.18□□□□□ -1.1
SHANK1-204ENST00000391814 HIVEP1P15822 2718 aa8.15□□□□□ -1.1
SHANK1-204ENST00000391814 ZZEF1O43149 2961 aa8.14□□□□□ -1.11
SHANK1-204ENST00000391814 KRTAP21-3Q3LHN1 58 aa8.13□□□□□ -1.11
SHANK1-204ENST00000391814 ASH1LQ9NR48 2969 aaKnown RBP8.13□□□□□ -1.11
SHANK1-204ENST00000391814 PRO2289Q9P1D8 64 aa8.11□□□□□ -1.11
SHANK1-204ENST00000391814 APCP25054 2843 aa8.09□□□□□ -1.12
SHANK1-204ENST00000391814 FLNCQ14315 2725 aa8.06□□□□□ -1.12
SHANK1-204ENST00000391814 ADGRG4Q8IZF6 3080 aa8.05□□□□□ -1.12
SHANK1-204ENST00000391814 KMT2BQ9UMN6 2715 aaPredicted RBP8.05□□□□□ -1.12
SHANK1-204ENST00000391814 TENM4Q6N022 2769 aa8.04□□□□□ -1.12
SHANK1-204ENST00000391814 KRTAP12-1P59990 96 aa8.03□□□□□ -1.12
SHANK1-204ENST00000391814 KRTAP13-4Q3LI77 160 aa8□□□□□ -1.13
SHANK1-204ENST00000391814 LAMA5O15230 3695 aa7.99□□□□□ -1.13
SHANK1-204ENST00000391814 NBEAQ8NFP9 2946 aa7.98□□□□□ -1.13
SHANK1-204ENST00000391814 ZFHX4Q86UP3 3567 aa7.97□□□□□ -1.13
SHANK1-204ENST00000391814 LOC400499M0QZD8 3231 aa7.94□□□□□ -1.14
SHANK1-204ENST00000391814 CSMD1Q96PZ7 3565 aa7.94□□□□□ -1.14
SHANK1-204ENST00000391814 CELSR2Q9HCU4 2923 aa7.93□□□□□ -1.14
SHANK1-204ENST00000391814 KRTAP15-1Q3LI76 137 aa7.89□□□□□ -1.15
SHANK1-204ENST00000391814 KRTAP3-1Q9BYR8 98 aa7.87□□□□□ -1.15
SHANK1-204ENST00000391814 RELNP78509 3460 aa7.84□□□□□ -1.15
SHANK1-204ENST00000391814 DCHS2Q6V1P9 2916 aa7.83□□□□□ -1.16
SHANK1-204ENST00000391814 CRCT1Q9UGL9 99 aa7.82□□□□□ -1.16
SHANK1-204ENST00000391814 TNRC18O15417 2968 aaPredicted RBP7.8□□□□□ -1.16
SHANK1-204ENST00000391814 DMXL1Q9Y485 3027 aa7.78□□□□□ -1.16
SHANK1-204ENST00000391814 NIPBLQ6KC79 2804 aaeCLIP7.72□□□□□ -1.17
SHANK1-204ENST00000391814 KRTAP10-6P60371 365 aaPredicted RBP7.68□□□□□ -1.18
SHANK1-204ENST00000391814 ZANQ9Y493 2812 aa7.68□□□□□ -1.18
SHANK1-204ENST00000391814 TENM2Q9NT68 2774 aa7.67□□□□□ -1.18
SHANK1-204ENST00000391814 TENM1Q9UKZ4 2725 aa7.65□□□□□ -1.18
SHANK1-204ENST00000391814 INE1O15225 51 aa7.64□□□□□ -1.19
SHANK1-204ENST00000391814 DMDP11532 3685 aa7.63□□□□□ -1.19
SHANK1-204ENST00000391814 NF1P21359 2839 aa7.62□□□□□ -1.19
SHANK1-204ENST00000391814 SPENQ96T58 3664 aaKnown RBP7.6□□□□□ -1.19
SHANK1-204ENST00000391814 NBPF19A0A087WUL8 3843 aa7.6□□□□□ -1.19
SHANK1-204ENST00000391814 FBN2P35556 2912 aa7.58□□□□□ -1.2
SHANK1-204ENST00000391814 HRNRQ86YZ3 2850 aaPredicted RBP7.58□□□□□ -1.2
SHANK1-204ENST00000391814 TGP01266 2768 aa7.56□□□□□ -1.2
SHANK1-204ENST00000391814 SMG1Q96Q15 3661 aaKnown RBP7.56□□□□□ -1.2
SHANK1-204ENST00000391814 CUBNO60494 3623 aa7.52□□□□□ -1.21
SHANK1-204ENST00000391814 SVEP1Q4LDE5 3571 aa7.52□□□□□ -1.21
SHANK1-204ENST00000391814 TENM3Q9P273 2699 aa7.51□□□□□ -1.21
SHANK1-204ENST00000391814 CELSR1Q9NYQ6 3014 aa7.51□□□□□ -1.21
SHANK1-204ENST00000391814 PKD1L1Q8TDX9 2849 aa7.45□□□□□ -1.22
SHANK1-204ENST00000391814 ZFHX3Q15911 3703 aa7.4□□□□□ -1.23
SHANK1-204ENST00000391814 KRTAP3-2Q9BYR7 98 aa7.39□□□□□ -1.23
SHANK1-204ENST00000391814 VWFP04275 2813 aa7.37□□□□□ -1.23
SHANK1-204ENST00000391814 KRTAP3-3Q9BYR6 98 aa7.34□□□□□ -1.23
SHANK1-204ENST00000391814 MXRA5Q9NR99 2828 aa7.28□□□□□ -1.24
SHANK1-204ENST00000391814 ANK3Q12955 4377 aaKnown RBP7.17□□□□□ -1.26
SHANK1-204ENST00000391814 PDZD2O15018 2839 aa7.15□□□□□ -1.27
SHANK1-204ENST00000391814 KRTAP10-12P60413 245 aa7.15□□□□□ -1.27
SHANK1-204ENST00000391814 CSMD2Q7Z408 3487 aa7.13□□□□□ -1.27
SHANK1-204ENST00000391814 LCE3AQ5TA76 89 aa7.08□□□□□ -1.28
SHANK1-204ENST00000391814 FBN1P35555 2871 aaKnown RBP7.01□□□□□ -1.29
SHANK1-204ENST00000391814 KRTAP12-3P60328 96 aa7.01□□□□□ -1.29
SHANK1-204ENST00000391814 HUWE1Q7Z6Z7 4374 aaKnown RBP7.01□□□□□ -1.29
SHANK1-204ENST00000391814 ALMS1Q8TCU4 4167 aa6.99□□□□□ -1.29
SHANK1-204ENST00000391814 MUC3AQ02505 3323 aa6.96□□□□□ -1.29
SHANK1-204ENST00000391814 BSNQ9UPA5 3926 aa6.96□□□□□ -1.3
SHANK1-204ENST00000391814 SRRM2Q9UQ35 2752 aaKnown RBP6.95□□□□□ -1.3
SHANK1-204ENST00000391814 KRTAP23-1A1A580 65 aa6.95□□□□□ -1.3
SHANK1-204ENST00000391814 KRTAP10-5P60370 271 aa6.95□□□□□ -1.3
SHANK1-204ENST00000391814 CSMD3Q7Z407 3707 aa6.92□□□□□ -1.3
SHANK1-204ENST00000391814 LORP23490 312 aaPredicted RBP6.92□□□□□ -1.3
SHANK1-204ENST00000391814 OTOGQ6ZRI0 2925 aa6.91□□□□□ -1.3
SHANK1-204ENST00000391814 VPS13CQ709C8 3753 aa6.91□□□□□ -1.3
SHANK1-204ENST00000391814 AKAP9Q99996 3911 aa6.9□□□□□ -1.31
SHANK1-204ENST00000391814 KRTAP4-5Q9BYR2 181 aa6.88□□□□□ -1.31
SHANK1-204ENST00000391814 MT1HL1P0DM35 61 aa6.84□□□□□ -1.32
SHANK1-204ENST00000391814 FBN3Q75N90 2809 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms