RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 TMEM256-PLSCR3K7ERE1 68 aa5.34□□□□□ -1.55
TRAV4-201ENST00000390426 TRACP01848 142 aa5.34□□□□□ -1.55
TRAV4-201ENST00000390426 MPLKIPQ8TAP9 179 aa5.34□□□□□ -1.55
TRAV4-201ENST00000390426 KRTAP4-8A0A0G2JLE6 195 aa5.33□□□□□ -1.56
TRAV4-201ENST00000390426 HSD52Q0P140 79 aa5.33□□□□□ -1.56
TRAV4-201ENST00000390426 COX6CP09669 75 aa5.32□□□□□ -1.56
TRAV4-201ENST00000390426 USH2AO75445 5202 aa5.31□□□□□ -1.56
TRAV4-201ENST00000390426 KRTAP9-7A8MTY7 169 aa5.31□□□□□ -1.56
TRAV4-201ENST00000390426 MT1FP04733 61 aa5.31□□□□□ -1.56
TRAV4-201ENST00000390426 UBE2V1Q13404 147 aa5.31□□□□□ -1.56
TRAV4-201ENST00000390426 VPS25Q9BRG1 176 aa5.31□□□□□ -1.56
TRAV4-201ENST00000390426 A0A1B0GVX0 72 aa5.29□□□□□ -1.56
TRAV4-201ENST00000390426 C8orf87E5RJ46 101 aa5.29□□□□□ -1.56
TRAV4-201ENST00000390426 KRTAP10-10P60014 251 aa5.29□□□□□ -1.56
TRAV4-201ENST00000390426 PYY3Q5JQD4 70 aa5.28□□□□□ -1.56
TRAV4-201ENST00000390426 SCGB1C2P0DMR2 95 aa5.27□□□□□ -1.57
TRAV4-201ENST00000390426 RBM3P98179 157 aaKnown RBP5.27□□□□□ -1.57
TRAV4-201ENST00000390426 KRTAP9-3Q9BYQ3 159 aa5.27□□□□□ -1.57
TRAV4-201ENST00000390426 SSPOA2VEC9 5147 aa5.26□□□□□ -1.57
TRAV4-201ENST00000390426 ZCCHC13Q8WW36 166 aaKnown RBP5.25□□□□□ -1.57
TRAV4-201ENST00000390426 DSCR8Q96T75 97 aa5.25□□□□□ -1.57
TRAV4-201ENST00000390426 BAALC-AS2P0C853 105 aa5.24□□□□□ -1.57
TRAV4-201ENST00000390426 SPINK7P58062 85 aa5.24□□□□□ -1.57
TRAV4-201ENST00000390426 MTURNQ8N3F0 131 aa5.24□□□□□ -1.57
TRAV4-201ENST00000390426 UQCR10Q9UDW1 63 aa5.24□□□□□ -1.57
TRAV4-201ENST00000390426 C9JAW5 83 aa5.23□□□□□ -1.57
TRAV4-201ENST00000390426 J3KT08 172 aa5.22□□□□□ -1.57
TRAV4-201ENST00000390426 FCGBPQ9Y6R7 5405 aaPredicted RBP5.22□□□□□ -1.57
TRAV4-201ENST00000390426 Q6ZQT0 140 aa5.21□□□□□ -1.58
TRAV4-201ENST00000390426 NDUFB1O75438 58 aa5.2□□□□□ -1.58
TRAV4-201ENST00000390426 C21orf62-AS1Q17RA5 79 aa5.2□□□□□ -1.58
TRAV4-201ENST00000390426 LYRM7Q5U5X0 104 aa5.19□□□□□ -1.58
TRAV4-201ENST00000390426 Q8N9P0 234 aaPredicted RBP5.19□□□□□ -1.58
TRAV4-201ENST00000390426 C8orf17Q9NRJ1 99 aa5.18□□□□□ -1.58
TRAV4-201ENST00000390426 WFDC13Q8IUB5 93 aa5.17□□□□□ -1.58
TRAV4-201ENST00000390426 KRTAP4-7Q9BYR0 210 aa5.17□□□□□ -1.58
TRAV4-201ENST00000390426 IGKV3D-7A0A0C4DH55 119 aa5.16□□□□□ -1.58
TRAV4-201ENST00000390426 A8MWP4 228 aa5.16□□□□□ -1.58
TRAV4-201ENST00000390426 NAA38Q9BRA0 125 aaKnown RBP5.16□□□□□ -1.58
TRAV4-201ENST00000390426 TMA7Q9Y2S6 64 aaKnown RBP5.16□□□□□ -1.58
TRAV4-201ENST00000390426 JMJD7-PLA2G4BH0Y9G9 81 aa5.14□□□□□ -1.59
TRAV4-201ENST00000390426 ATXN8Q156A1 80 aa5.14□□□□□ -1.59
TRAV4-201ENST00000390426 Q6ZVQ6 151 aa5.14□□□□□ -1.59
TRAV4-201ENST00000390426 LOC110117498A0A087WWA1 95 aa5.13□□□□□ -1.59
TRAV4-201ENST00000390426 LCE1DQ5T752 114 aa5.12□□□□□ -1.59
TRAV4-201ENST00000390426 LCE4AQ5TA78 99 aa5.12□□□□□ -1.59
TRAV4-201ENST00000390426 C14orf132Q9NPU4 83 aa5.12□□□□□ -1.59
TRAV4-201ENST00000390426 A0A1B0GW54 56 aa5.11□□□□□ -1.59
TRAV4-201ENST00000390426 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
TRAV4-201ENST00000390426 LINC00846Q9NV44 126 aa5.11□□□□□ -1.59
TRAV4-201ENST00000390426 PDE6GP18545 87 aa5.1□□□□□ -1.59
TRAV4-201ENST00000390426 NREPQ16612 68 aa5.1□□□□□ -1.59
TRAV4-201ENST00000390426 PRR15Q8IV56 129 aa5.1□□□□□ -1.59
TRAV4-201ENST00000390426 M0R143 59 aa5.09□□□□□ -1.59
TRAV4-201ENST00000390426 MMP24-AS1A0A0U1RRL7 71 aa5.08□□□□□ -1.6
TRAV4-201ENST00000390426 MRPL34Q9BQ48 92 aaKnown RBP5.08□□□□□ -1.6
TRAV4-201ENST00000390426 H1FX-AS1Q4G0G2 97 aa5.07□□□□□ -1.6
TRAV4-201ENST00000390426 TMEM254Q8TBM7 123 aa5.07□□□□□ -1.6
TRAV4-201ENST00000390426 hDV103S1A0JD37 113 aa5.05□□□□□ -1.6
TRAV4-201ENST00000390426 NDUFS5O43920 106 aa5.05□□□□□ -1.6
TRAV4-201ENST00000390426 K7EQZ3 153 aa5.04□□□□□ -1.6
TRAV4-201ENST00000390426 IGKV2D-30A0A075B6S6 120 aa5.02□□□□□ -1.61
TRAV4-201ENST00000390426 IGKV2-30P06310 120 aa5.02□□□□□ -1.61
TRAV4-201ENST00000390426 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
TRAV4-201ENST00000390426 Q5W150 140 aa5.01□□□□□ -1.61
TRAV4-201ENST00000390426 MACF1Q9UPN3 7388 aaKnown RBP5.01□□□□□ -1.61
TRAV4-201ENST00000390426 BATFQ16520 125 aa5□□□□□ -1.61
TRAV4-201ENST00000390426 SYNE2Q8WXH0 6885 aaKnown RBP5□□□□□ -1.61
TRAV4-201ENST00000390426 BPY2O14599 106 aa4.99□□□□□ -1.61
TRAV4-201ENST00000390426 C7orf65Q6ZTY9 151 aa4.99□□□□□ -1.61
TRAV4-201ENST00000390426 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
TRAV4-201ENST00000390426 H3BT86 120 aa4.96□□□□□ -1.62
TRAV4-201ENST00000390426 Q8N9L7 120 aa4.96□□□□□ -1.62
TRAV4-201ENST00000390426 HCG22E2RYF7 251 aa4.95□□□□□ -1.62
TRAV4-201ENST00000390426 C4orf26Q17RF5 130 aa4.95□□□□□ -1.62
TRAV4-201ENST00000390426 CASC2Q6XLA1 102 aa4.95□□□□□ -1.62
TRAV4-201ENST00000390426 KRTAP4-2Q9BYR5 136 aa4.95□□□□□ -1.62
TRAV4-201ENST00000390426 C9orf118A6NHY6 69 aa4.94□□□□□ -1.62
TRAV4-201ENST00000390426 TSTD3H0UI37 97 aa4.94□□□□□ -1.62
TRAV4-201ENST00000390426 SMIM6P0DI80 62 aa4.94□□□□□ -1.62
TRAV4-201ENST00000390426 KRTAP6-3Q3LI67 103 aa4.94□□□□□ -1.62
TRAV4-201ENST00000390426 A0A1W2PPM0 123 aa4.92□□□□□ -1.62
TRAV4-201ENST00000390426 TAX1BP3O14907 124 aa4.92□□□□□ -1.62
TRAV4-201ENST00000390426 C5orf47Q569G3 176 aa4.91□□□□□ -1.62
TRAV4-201ENST00000390426 CXCL6P80162 114 aa4.89□□□□□ -1.63
TRAV4-201ENST00000390426 FAM236AA0A1B0GUQ0 79 aa4.88□□□□□ -1.63
TRAV4-201ENST00000390426 FAM236BA0A1B0GV22 79 aa4.88□□□□□ -1.63
TRAV4-201ENST00000390426 KRTAP3-1Q9BYR8 98 aa4.87□□□□□ -1.63
TRAV4-201ENST00000390426 S4R3F8 94 aa4.85□□□□□ -1.63
TRAV4-201ENST00000390426 A6NN06 94 aa4.84□□□□□ -1.63
TRAV4-201ENST00000390426 MT1BP07438 61 aa4.84□□□□□ -1.63
TRAV4-201ENST00000390426 SPCS1Q9Y6A9 102 aa4.84□□□□□ -1.63
TRAV4-201ENST00000390426 CSAG1Q6PB30 78 aa4.83□□□□□ -1.64
TRAV4-201ENST00000390426 C1orf64Q8NEQ6 169 aa4.83□□□□□ -1.64
TRAV4-201ENST00000390426 UBL5Q9BZL1 73 aa4.83□□□□□ -1.64
TRAV4-201ENST00000390426 Q5VV11 94 aa4.82□□□□□ -1.64
TRAV4-201ENST00000390426 LCA10Q71F78 164 aa4.81□□□□□ -1.64
TRAV4-201ENST00000390426 KRTAP19-8Q3LI54 63 aa4.8□□□□□ -1.64
TRAV4-201ENST00000390426 SPRR2GQ9BYE4 73 aa4.79□□□□□ -1.64
TRAV4-201ENST00000390426 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms