RNA–Protein interactions for RNA: ENST00000389463.8

LAMA4-205, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-205ENST00000389463 TACC2O95359 2948 aa6.2□□□□□ -1.42
LAMA4-205ENST00000389463 UTP20O75691 2785 aaKnown RBP6.2□□□□□ -1.42
LAMA4-205ENST00000389463 DMXL2Q8TDJ6 3036 aa6.19□□□□□ -1.42
LAMA4-205ENST00000389463 TNRC18O15417 2968 aaPredicted RBP6.19□□□□□ -1.42
LAMA4-205ENST00000389463 KRTAP25-1Q3LHN0 102 aa6.18□□□□□ -1.42
LAMA4-205ENST00000389463 KALRNO60229 2985 aa6.18□□□□□ -1.42
LAMA4-205ENST00000389463 DMBT1Q9UGM3 2413 aaPredicted RBP6.17□□□□□ -1.42
LAMA4-205ENST00000389463 ADGRG4Q8IZF6 3080 aa6.17□□□□□ -1.42
LAMA4-205ENST00000389463 A8MU10 97 aa6.15□□□□□ -1.42
LAMA4-205ENST00000389463 LRBAP50851 2863 aa6.13□□□□□ -1.43
LAMA4-205ENST00000389463 NBEAQ8NFP9 2946 aa6.13□□□□□ -1.43
LAMA4-205ENST00000389463 TENM4Q6N022 2769 aa6.13□□□□□ -1.43
LAMA4-205ENST00000389463 APCP25054 2843 aa6.12□□□□□ -1.43
LAMA4-205ENST00000389463 EYSQ5T1H1 3165 aa6.12□□□□□ -1.43
LAMA4-205ENST00000389463 REV3LO60673 3130 aa6.11□□□□□ -1.43
LAMA4-205ENST00000389463 A8MUU9 505 aa6.11□□□□□ -1.43
LAMA4-205ENST00000389463 SPTBN5Q9NRC6 3674 aaKnown RBP6.1□□□□□ -1.43
LAMA4-205ENST00000389463 SPEGQ15772 3267 aa6.1□□□□□ -1.43
LAMA4-205ENST00000389463 CRYBG3Q68DQ2 2970 aa6.09□□□□□ -1.43
LAMA4-205ENST00000389463 CFAP47Q6ZTR5 3102 aa6.08□□□□□ -1.44
LAMA4-205ENST00000389463 C10orf95Q9H7T3 257 aa6.07□□□□□ -1.44
LAMA4-205ENST00000389463 ZZEF1O43149 2961 aa6.04□□□□□ -1.44
LAMA4-205ENST00000389463 DMXL1Q9Y485 3027 aa6.04□□□□□ -1.44
LAMA4-205ENST00000389463 KRTAP1-4P0C5Y4 121 aa6.01□□□□□ -1.45
LAMA4-205ENST00000389463 USP34Q70CQ2 3546 aa5.99□□□□□ -1.45
LAMA4-205ENST00000389463 ASH1LQ9NR48 2969 aaKnown RBP5.98□□□□□ -1.45
LAMA4-205ENST00000389463 NIPBLQ6KC79 2804 aaeCLIP5.98□□□□□ -1.45
LAMA4-205ENST00000389463 XP32Q5T750 250 aa5.98□□□□□ -1.45
LAMA4-205ENST00000389463 TPRXLQ17RH7 258 aa5.94□□□□□ -1.46
LAMA4-205ENST00000389463 LOC400499M0QZD8 3231 aa5.92□□□□□ -1.46
LAMA4-205ENST00000389463 CELSR2Q9HCU4 2923 aa5.91□□□□□ -1.46
LAMA4-205ENST00000389463 ZANQ9Y493 2812 aa5.9□□□□□ -1.46
LAMA4-205ENST00000389463 MYO15AQ9UKN7 3530 aa5.88□□□□□ -1.47
LAMA4-205ENST00000389463 A0A1B0GVY2 172 aa5.87□□□□□ -1.47
LAMA4-205ENST00000389463 DCHS2Q6V1P9 2916 aa5.86□□□□□ -1.47
LAMA4-205ENST00000389463 TNP1P09430 55 aa5.84□□□□□ -1.47
LAMA4-205ENST00000389463 HRNRQ86YZ3 2850 aaPredicted RBP5.83□□□□□ -1.48
LAMA4-205ENST00000389463 KRTAP13-3Q3SY46 172 aa5.8□□□□□ -1.48
LAMA4-205ENST00000389463 KRTAP10-10P60014 251 aa5.78□□□□□ -1.48
LAMA4-205ENST00000389463 TENM2Q9NT68 2774 aa5.77□□□□□ -1.49
LAMA4-205ENST00000389463 NF1P21359 2839 aa5.77□□□□□ -1.49
LAMA4-205ENST00000389463 KRTAP10-8P60410 259 aa5.77□□□□□ -1.49
LAMA4-205ENST00000389463 FBN2P35556 2912 aa5.75□□□□□ -1.49
LAMA4-205ENST00000389463 TENM1Q9UKZ4 2725 aa5.74□□□□□ -1.49
LAMA4-205ENST00000389463 RELNP78509 3460 aa5.7□□□□□ -1.5
LAMA4-205ENST00000389463 WDFY3Q8IZQ1 3526 aa5.66□□□□□ -1.5
LAMA4-205ENST00000389463 PRO2289Q9P1D8 64 aa5.66□□□□□ -1.5
LAMA4-205ENST00000389463 TENM3Q9P273 2699 aa5.66□□□□□ -1.5
LAMA4-205ENST00000389463 MXRA5Q9NR99 2828 aa5.65□□□□□ -1.51
LAMA4-205ENST00000389463 DCHS1Q96JQ0 3298 aa5.64□□□□□ -1.51
LAMA4-205ENST00000389463 CELSR1Q9NYQ6 3014 aa5.62□□□□□ -1.51
LAMA4-205ENST00000389463 P0C880 135 aa5.6□□□□□ -1.51
LAMA4-205ENST00000389463 PP632Q6XCG6 107 aa5.59□□□□□ -1.51
LAMA4-205ENST00000389463 PDZD2O15018 2839 aa5.59□□□□□ -1.51
LAMA4-205ENST00000389463 LAMA5O15230 3695 aa5.59□□□□□ -1.51
LAMA4-205ENST00000389463 ASPMQ8IZT6 3477 aa5.58□□□□□ -1.52
LAMA4-205ENST00000389463 H0YAA0 97 aa5.56□□□□□ -1.52
LAMA4-205ENST00000389463 ZFHX4Q86UP3 3567 aa5.53□□□□□ -1.52
LAMA4-205ENST00000389463 NBPF19A0A087WUL8 3843 aa5.51□□□□□ -1.53
LAMA4-205ENST00000389463 MUC3AQ02505 3323 aa5.51□□□□□ -1.53
LAMA4-205ENST00000389463 PKD1L1Q8TDX9 2849 aa5.5□□□□□ -1.53
LAMA4-205ENST00000389463 DMDP11532 3685 aa5.49□□□□□ -1.53
LAMA4-205ENST00000389463 OTOGQ6ZRI0 2925 aa5.42□□□□□ -1.54
LAMA4-205ENST00000389463 ANK3Q12955 4377 aaKnown RBP5.4□□□□□ -1.54
LAMA4-205ENST00000389463 VWFP04275 2813 aa5.38□□□□□ -1.55
LAMA4-205ENST00000389463 TGP01266 2768 aa5.38□□□□□ -1.55
LAMA4-205ENST00000389463 CSMD1Q96PZ7 3565 aa5.36□□□□□ -1.55
LAMA4-205ENST00000389463 FBN1P35555 2871 aaKnown RBP5.34□□□□□ -1.55
LAMA4-205ENST00000389463 SMG1Q96Q15 3661 aaKnown RBP5.32□□□□□ -1.56
LAMA4-205ENST00000389463 ZFHX3Q15911 3703 aa5.32□□□□□ -1.56
LAMA4-205ENST00000389463 MT1HL1P0DM35 61 aa5.28□□□□□ -1.56
LAMA4-205ENST00000389463 KRTAP12-2P59991 146 aa5.27□□□□□ -1.57
LAMA4-205ENST00000389463 CSMD2Q7Z408 3487 aa5.24□□□□□ -1.57
LAMA4-205ENST00000389463 SVEP1Q4LDE5 3571 aa5.23□□□□□ -1.57
LAMA4-205ENST00000389463 KRTAP3-1Q9BYR8 98 aa5.21□□□□□ -1.57
LAMA4-205ENST00000389463 KRTAP4-5Q9BYR2 181 aa5.2□□□□□ -1.58
LAMA4-205ENST00000389463 KRTAP13-4Q3LI77 160 aa5.2□□□□□ -1.58
LAMA4-205ENST00000389463 CUBNO60494 3623 aa5.17□□□□□ -1.58
LAMA4-205ENST00000389463 KRTAP12-1P59990 96 aa5.16□□□□□ -1.58
LAMA4-205ENST00000389463 SPENQ96T58 3664 aaKnown RBP5.15□□□□□ -1.59
LAMA4-205ENST00000389463 KRTAP10-4P60372 401 aaPredicted RBP5.12□□□□□ -1.59
LAMA4-205ENST00000389463 SRRM2Q9UQ35 2752 aaKnown RBP5.1□□□□□ -1.59
LAMA4-205ENST00000389463 HUWE1Q7Z6Z7 4374 aaKnown RBP5.09□□□□□ -1.59
LAMA4-205ENST00000389463 KRTAP15-1Q3LI76 137 aa5.09□□□□□ -1.59
LAMA4-205ENST00000389463 ALMS1Q8TCU4 4167 aa5.09□□□□□ -1.59
LAMA4-205ENST00000389463 FBN3Q75N90 2809 aa5.08□□□□□ -1.6
LAMA4-205ENST00000389463 TRRAPQ9Y4A5 3859 aa5.06□□□□□ -1.6
LAMA4-205ENST00000389463 BSNQ9UPA5 3926 aa5.02□□□□□ -1.61
LAMA4-205ENST00000389463 KRTAP10-6P60371 365 aaPredicted RBP5.02□□□□□ -1.61
LAMA4-205ENST00000389463 CRCT1Q9UGL9 99 aa5□□□□□ -1.61
LAMA4-205ENST00000389463 MEGF8Q7Z7M0 2845 aa4.99□□□□□ -1.61
LAMA4-205ENST00000389463 INE1O15225 51 aa4.98□□□□□ -1.61
LAMA4-205ENST00000389463 COL7A1Q02388 2944 aa4.94□□□□□ -1.62
LAMA4-205ENST00000389463 KRTAP10-12P60413 245 aa4.9□□□□□ -1.63
LAMA4-205ENST00000389463 KRTAP3-3Q9BYR6 98 aa4.89□□□□□ -1.63
LAMA4-205ENST00000389463 KRTAP3-2Q9BYR7 98 aa4.85□□□□□ -1.63
LAMA4-205ENST00000389463 DNAH9Q9NYC9 4486 aa4.85□□□□□ -1.63
LAMA4-205ENST00000389463 VPS13CQ709C8 3753 aa4.82□□□□□ -1.64
LAMA4-205ENST00000389463 DNAH1Q9P2D7 4330 aa4.75□□□□□ -1.65
LAMA4-205ENST00000389463 DNAH5Q8TE73 4624 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms