RNA–Protein interactions for RNA: ENST00000389428.7

SEMA6D-206, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 5,874 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-206ENST00000389428 CHD6Q8TD26 2715 aa5.59□□□□□ -1.51
SEMA6D-206ENST00000389428 FRYQ5TBA9 3013 aa5.56□□□□□ -1.52
SEMA6D-206ENST00000389428 FREM2Q5SZK8 3169 aa5.55□□□□□ -1.52
SEMA6D-206ENST00000389428 FLNCQ14315 2725 aa5.54□□□□□ -1.52
SEMA6D-206ENST00000389428 LAMA1P25391 3075 aa5.54□□□□□ -1.52
SEMA6D-206ENST00000389428 KRTAP3-1Q9BYR8 98 aa5.53□□□□□ -1.52
SEMA6D-206ENST00000389428 TEP1Q99973 2627 aaKnown RBP5.53□□□□□ -1.52
SEMA6D-206ENST00000389428 USP34Q70CQ2 3546 aa5.5□□□□□ -1.53
SEMA6D-206ENST00000389428 STAB2Q8WWQ8 2551 aa5.5□□□□□ -1.53
SEMA6D-206ENST00000389428 MAP1AP78559 2803 aaPredicted RBP5.49□□□□□ -1.53
SEMA6D-206ENST00000389428 GCN1Q92616 2671 aaKnown RBP5.49□□□□□ -1.53
SEMA6D-206ENST00000389428 COL6A5A8TX70 2615 aa5.48□□□□□ -1.53
SEMA6D-206ENST00000389428 KRTAP10-12P60413 245 aa5.48□□□□□ -1.53
SEMA6D-206ENST00000389428 KALRNO60229 2985 aa5.47□□□□□ -1.53
SEMA6D-206ENST00000389428 TEX15Q9BXT5 2789 aa5.47□□□□□ -1.53
SEMA6D-206ENST00000389428 CRCT1Q9UGL9 99 aa5.46□□□□□ -1.53
SEMA6D-206ENST00000389428 FRYLO94915 3013 aa5.46□□□□□ -1.54
SEMA6D-206ENST00000389428 BAHCC1Q9P281 2608 aa5.46□□□□□ -1.54
SEMA6D-206ENST00000389428 LRBAP50851 2863 aa5.44□□□□□ -1.54
SEMA6D-206ENST00000389428 NBEAL2Q6ZNJ1 2754 aa5.44□□□□□ -1.54
SEMA6D-206ENST00000389428 DMXL2Q8TDJ6 3036 aa5.44□□□□□ -1.54
SEMA6D-206ENST00000389428 REV3LO60673 3130 aa5.43□□□□□ -1.54
SEMA6D-206ENST00000389428 KRTAP10-6P60371 365 aaPredicted RBP5.43□□□□□ -1.54
SEMA6D-206ENST00000389428 ATMQ13315 3056 aa5.42□□□□□ -1.54
SEMA6D-206ENST00000389428 SETXQ7Z333 2677 aaKnown RBP5.41□□□□□ -1.54
SEMA6D-206ENST00000389428 NSD1Q96L73 2696 aaPredicted RBP5.38□□□□□ -1.55
SEMA6D-206ENST00000389428 NOTCH1P46531 2555 aa5.38□□□□□ -1.55
SEMA6D-206ENST00000389428 COL12A1Q99715 3063 aa5.38□□□□□ -1.55
SEMA6D-206ENST00000389428 UBR5O95071 2799 aaPredicted RBP5.37□□□□□ -1.55
SEMA6D-206ENST00000389428 SPEGQ15772 3267 aa5.37□□□□□ -1.55
SEMA6D-206ENST00000389428 ITPR2Q14571 2701 aa5.37□□□□□ -1.55
SEMA6D-206ENST00000389428 BOD1L1Q8NFC6 3051 aa5.37□□□□□ -1.55
SEMA6D-206ENST00000389428 ZZEF1O43149 2961 aa5.36□□□□□ -1.55
SEMA6D-206ENST00000389428 ADGRG4Q8IZF6 3080 aa5.36□□□□□ -1.55
SEMA6D-206ENST00000389428 ITPR1Q14643 2758 aa5.36□□□□□ -1.55
SEMA6D-206ENST00000389428 MYO15AQ9UKN7 3530 aa5.36□□□□□ -1.55
SEMA6D-206ENST00000389428 DMXL1Q9Y485 3027 aa5.34□□□□□ -1.55
SEMA6D-206ENST00000389428 CFAP47Q6ZTR5 3102 aa5.33□□□□□ -1.56
SEMA6D-206ENST00000389428 UTP20O75691 2785 aaKnown RBP5.32□□□□□ -1.56
SEMA6D-206ENST00000389428 EYSQ5T1H1 3165 aa5.31□□□□□ -1.56
SEMA6D-206ENST00000389428 APCP25054 2843 aa5.31□□□□□ -1.56
SEMA6D-206ENST00000389428 NBEAQ8NFP9 2946 aa5.3□□□□□ -1.56
SEMA6D-206ENST00000389428 HIVEP1P15822 2718 aa5.29□□□□□ -1.56
SEMA6D-206ENST00000389428 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
SEMA6D-206ENST00000389428 KRTAP12-3P60328 96 aa5.27□□□□□ -1.57
SEMA6D-206ENST00000389428 TACC2O95359 2948 aa5.26□□□□□ -1.57
SEMA6D-206ENST00000389428 ASPMQ8IZT6 3477 aa5.24□□□□□ -1.57
SEMA6D-206ENST00000389428 DCHS1Q96JQ0 3298 aa5.23□□□□□ -1.57
SEMA6D-206ENST00000389428 WDFY3Q8IZQ1 3526 aa5.22□□□□□ -1.57
SEMA6D-206ENST00000389428 ZANQ9Y493 2812 aa5.2□□□□□ -1.58
SEMA6D-206ENST00000389428 KRTAP3-2Q9BYR7 98 aa5.19□□□□□ -1.58
SEMA6D-206ENST00000389428 HRNRQ86YZ3 2850 aaPredicted RBP5.18□□□□□ -1.58
SEMA6D-206ENST00000389428 LCE3AQ5TA76 89 aa5.18□□□□□ -1.58
SEMA6D-206ENST00000389428 MT1HL1P0DM35 61 aa5.18□□□□□ -1.58
SEMA6D-206ENST00000389428 NIPBLQ6KC79 2804 aaeCLIP5.18□□□□□ -1.58
SEMA6D-206ENST00000389428 LOC400499M0QZD8 3231 aa5.17□□□□□ -1.58
SEMA6D-206ENST00000389428 KRTAP3-3Q9BYR6 98 aa5.16□□□□□ -1.58
SEMA6D-206ENST00000389428 ZFHX4Q86UP3 3567 aa5.15□□□□□ -1.58
SEMA6D-206ENST00000389428 ASH1LQ9NR48 2969 aaKnown RBP5.13□□□□□ -1.59
SEMA6D-206ENST00000389428 CSMD1Q96PZ7 3565 aa5.13□□□□□ -1.59
SEMA6D-206ENST00000389428 KRTAP10-5P60370 271 aa5.09□□□□□ -1.6
SEMA6D-206ENST00000389428 CELSR2Q9HCU4 2923 aa5.08□□□□□ -1.6
SEMA6D-206ENST00000389428 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
SEMA6D-206ENST00000389428 ALMS1Q8TCU4 4167 aa5.06□□□□□ -1.6
SEMA6D-206ENST00000389428 CRYBG3Q68DQ2 2970 aa5.06□□□□□ -1.6
SEMA6D-206ENST00000389428 TENM4Q6N022 2769 aa5.05□□□□□ -1.6
SEMA6D-206ENST00000389428 NF1P21359 2839 aa5.05□□□□□ -1.6
SEMA6D-206ENST00000389428 HUWE1Q7Z6Z7 4374 aaKnown RBP5.02□□□□□ -1.61
SEMA6D-206ENST00000389428 ZFHX3Q15911 3703 aa5.01□□□□□ -1.61
SEMA6D-206ENST00000389428 DCHS2Q6V1P9 2916 aa5.01□□□□□ -1.61
SEMA6D-206ENST00000389428 SMG1Q96Q15 3661 aaKnown RBP5□□□□□ -1.61
SEMA6D-206ENST00000389428 MXRA5Q9NR99 2828 aa4.99□□□□□ -1.61
SEMA6D-206ENST00000389428 LAMA5O15230 3695 aa4.99□□□□□ -1.61
SEMA6D-206ENST00000389428 RELNP78509 3460 aa4.98□□□□□ -1.61
SEMA6D-206ENST00000389428 FBN2P35556 2912 aa4.98□□□□□ -1.61
SEMA6D-206ENST00000389428 MUC3AQ02505 3323 aa4.97□□□□□ -1.61
SEMA6D-206ENST00000389428 TGP01266 2768 aa4.97□□□□□ -1.61
SEMA6D-206ENST00000389428 DMDP11532 3685 aa4.93□□□□□ -1.62
SEMA6D-206ENST00000389428 PDZD2O15018 2839 aa4.92□□□□□ -1.62
SEMA6D-206ENST00000389428 NBPF19A0A087WUL8 3843 aa4.92□□□□□ -1.62
SEMA6D-206ENST00000389428 KRTAP10-4P60372 401 aaPredicted RBP4.92□□□□□ -1.62
SEMA6D-206ENST00000389428 ANK3Q12955 4377 aaKnown RBP4.91□□□□□ -1.62
SEMA6D-206ENST00000389428 KRTAP4-5Q9BYR2 181 aa4.9□□□□□ -1.63
SEMA6D-206ENST00000389428 TENM2Q9NT68 2774 aa4.87□□□□□ -1.63
SEMA6D-206ENST00000389428 LORP23490 312 aaPredicted RBP4.85□□□□□ -1.63
SEMA6D-206ENST00000389428 SVEP1Q4LDE5 3571 aa4.85□□□□□ -1.63
SEMA6D-206ENST00000389428 CELSR1Q9NYQ6 3014 aa4.84□□□□□ -1.63
SEMA6D-206ENST00000389428 OTOGQ6ZRI0 2925 aa4.82□□□□□ -1.64
SEMA6D-206ENST00000389428 TENM1Q9UKZ4 2725 aa4.79□□□□□ -1.64
SEMA6D-206ENST00000389428 SPENQ96T58 3664 aaKnown RBP4.78□□□□□ -1.64
SEMA6D-206ENST00000389428 TENM3Q9P273 2699 aa4.78□□□□□ -1.64
SEMA6D-206ENST00000389428 KRTAP10-7P60409 375 aaPredicted RBP4.75□□□□□ -1.65
SEMA6D-206ENST00000389428 BSNQ9UPA5 3926 aa4.74□□□□□ -1.65
SEMA6D-206ENST00000389428 DNAH2Q9P225 4427 aa4.7□□□□□ -1.66
SEMA6D-206ENST00000389428 VWFP04275 2813 aa4.69□□□□□ -1.66
SEMA6D-206ENST00000389428 MT1HP80294 61 aa4.67□□□□□ -1.66
SEMA6D-206ENST00000389428 AKAP9Q99996 3911 aa4.65□□□□□ -1.66
SEMA6D-206ENST00000389428 FBN1P35555 2871 aaKnown RBP4.63□□□□□ -1.67
SEMA6D-206ENST00000389428 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
SEMA6D-206ENST00000389428 VPS13CQ709C8 3753 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms